FFCP PHASE1:Hg19::chr3:55502162..55502167,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7474 | |EntrezGene=7474 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12784 | |HGNC=12784 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-355bp_to_AK021503_5end | |association_with_transcript=-355bp_to_AK021503_5end | ||
|cluster_id=chr3:55502162..55502167,- | |||
|coexpression_cluster_id=C1929 | |coexpression_cluster_id=C1929 | ||
|description=CAGE_peak_2_at_WNT5A_5end | |description=CAGE_peak_2_at_WNT5A_5end | ||
|id=chr3:55502162..55502167,- | |id=chr3:55502162..55502167,- | ||
|ontology_enrichment_celltype=CL:0000055!6.30e-20!180;CL:0000057!9.36e-12!75;CL:0000680!2.73e-08!57;CL:0000056!2.73e-08!57;CL:0000355!2.73e-08!57;CL:0002620!1.35e-07!23;CL:0000187!2.28e-07!54;CL:0000183!5.43e-07!59 | |ontology_enrichment_celltype=CL:0000055!6.30e-20!180;CL:0000057!9.36e-12!75;CL:0000680!2.73e-08!57;CL:0000056!2.73e-08!57;CL:0000355!2.73e-08!57;CL:0002620!1.35e-07!23;CL:0000187!2.28e-07!54;CL:0000183!5.43e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000134;4.18e-10;55!CL:0000349;3.94e-09;19!CL:0000723;1.05e-08;61!CL:0002620;2.06e-08;23!CL:0000048;5.65e-08;58!CL:0000034;3.68e-07;69!CL:0002320;7.41e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.83e-14,76;CL:0000349,5.01e-09,19;CL:0002620,1.87e-08,23;CL:0000680,3.58e-08,58;CL:0000056,3.58e-08,58;CL:0000355,3.58e-08,58;CL:0000187,3.67e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;2.86e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.23e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.59e-12!83;UBERON:0002329!3.59e-12!83;UBERON:0003077!3.59e-12!83;UBERON:0003059!3.59e-12!83;UBERON:0007282!3.59e-12!83;UBERON:0009618!3.59e-12!83;UBERON:0007285!3.59e-12!83;UBERON:0003102!4.43e-11!95;UBERON:0000486!4.68e-10!82;UBERON:0000475!1.03e-09!365;UBERON:0004290!4.39e-09!70;UBERON:0000481!2.16e-08!347;UBERON:0000468!3.35e-08!659;UBERON:0005256!4.84e-08!143;UBERON:0005631!6.71e-08!14;UBERON:0000158!6.71e-08!14;UBERON:0001134!1.32e-07!61;UBERON:0002036!1.32e-07!61;UBERON:0003082!1.32e-07!61;UBERON:0002385!2.48e-07!63;UBERON:0001015!2.48e-07!63;UBERON:0000383!2.48e-07!63;UBERON:0003104!3.41e-07!238;UBERON:0009142!3.41e-07!238;UBERON:0000478!3.67e-07!24;UBERON:0004923!7.21e-07!57;UBERON:0002199!7.97e-07!45;UBERON:0002416!7.97e-07!45 | |ontology_enrichment_uberon=UBERON:0000914!3.59e-12!83;UBERON:0002329!3.59e-12!83;UBERON:0003077!3.59e-12!83;UBERON:0003059!3.59e-12!83;UBERON:0007282!3.59e-12!83;UBERON:0009618!3.59e-12!83;UBERON:0007285!3.59e-12!83;UBERON:0003102!4.43e-11!95;UBERON:0000486!4.68e-10!82;UBERON:0000475!1.03e-09!365;UBERON:0004290!4.39e-09!70;UBERON:0000481!2.16e-08!347;UBERON:0000468!3.35e-08!659;UBERON:0005256!4.84e-08!143;UBERON:0005631!6.71e-08!14;UBERON:0000158!6.71e-08!14;UBERON:0001134!1.32e-07!61;UBERON:0002036!1.32e-07!61;UBERON:0003082!1.32e-07!61;UBERON:0002385!2.48e-07!63;UBERON:0001015!2.48e-07!63;UBERON:0000383!2.48e-07!63;UBERON:0003104!3.41e-07!238;UBERON:0009142!3.41e-07!238;UBERON:0000478!3.67e-07!24;UBERON:0004923!7.21e-07!57;UBERON:0002199!7.97e-07!45;UBERON:0002416!7.97e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;9.33e-08;24!UBERON:0001434;1.36e-07;36!UBERON:0002204;1.50e-07;70!UBERON:0000305;9.52e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.01e-11,99;UBERON:0000486,1.21e-09,83;UBERON:0007524,4.63e-09,73;UBERON:0002329,6.11e-09,71;UBERON:0003059,6.11e-09,71;UBERON:0007282,6.11e-09,71;UBERON:0004290,6.11e-09,71;UBERON:0009618,6.11e-09,71;UBERON:0003077,1.37e-08,72;UBERON:0007285,1.37e-08,72;UBERON:0005631,1.66e-08,14;UBERON:0000158,1.66e-08,14;UBERON:0004923,2.15e-08,66;UBERON:0007503,9.34e-08,78;UBERON:0000478,1.08e-07,24;UBERON:0001134,1.67e-07,62;UBERON:0002036,1.67e-07,62;UBERON:0003082,1.67e-07,62;UBERON:0002199,2.14e-07,46;UBERON:0002416,2.14e-07,46;UBERON:0002385,7.47e-07,64;UBERON:0001015,7.47e-07,64;UBERON:0000383,7.47e-07,64;UBERON:0000305,9.83e-07,7 | |||
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| ||
|short_description=p2@WNT5A | |short_description=p2@WNT5A | ||
}} | }} |
Latest revision as of 02:48, 19 September 2015
Short description: | p2@WNT5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_WNT5A_5end |
Coexpression cluster: | C1929_Fibroblast_Olfactory_mesenchymal_Chondrocyte_normal_Mesenchymal_Hair |
Association with transcript: | -355bp_to_AK021503_5end |
EntrezGene: | WNT5A |
HGNC: | 12784 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.83e-14 | 76 |
extraembryonic cell | 5.01e-09 | 19 |
skin fibroblast | 1.87e-08 | 23 |
muscle precursor cell | 3.58e-08 | 58 |
myoblast | 3.58e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.58e-08 | 58 |
muscle cell | 3.67e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
surface structure | 5.01e-11 | 99 |
multilaminar epithelium | 1.21e-09 | 83 |
dense mesenchyme tissue | 4.63e-09 | 73 |
somite | 6.11e-09 | 71 |
presomitic mesoderm | 6.11e-09 | 71 |
presumptive segmental plate | 6.11e-09 | 71 |
dermomyotome | 6.11e-09 | 71 |
trunk paraxial mesoderm | 6.11e-09 | 71 |
paraxial mesoderm | 1.37e-08 | 72 |
presumptive paraxial mesoderm | 1.37e-08 | 72 |
extraembryonic membrane | 1.66e-08 | 14 |
membranous layer | 1.66e-08 | 14 |
organ component layer | 2.15e-08 | 66 |
epithelial vesicle | 9.34e-08 | 78 |
extraembryonic structure | 1.08e-07 | 24 |
skeletal muscle tissue | 1.67e-07 | 62 |
striated muscle tissue | 1.67e-07 | 62 |
myotome | 1.67e-07 | 62 |
integument | 2.14e-07 | 46 |
integumental system | 2.14e-07 | 46 |
muscle tissue | 7.47e-07 | 64 |
musculature | 7.47e-07 | 64 |
musculature of body | 7.47e-07 | 64 |
amnion | 9.83e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.23e-07 | 14 |