FFCP PHASE1:Hg19::chr3:133667806..133667817,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6578 | |EntrezGene=6578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10955 | |HGNC=10955 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=242bp_to_ENST00000477061_5end | |association_with_transcript=242bp_to_ENST00000477061_5end | ||
|cluster_id=chr3:133667806..133667817,- | |||
|coexpression_cluster_id=C50 | |coexpression_cluster_id=C50 | ||
|description=CAGE_peak_5_at_SLCO2A1_5end | |description=CAGE_peak_5_at_SLCO2A1_5end | ||
|id=chr3:133667806..133667817,- | |id=chr3:133667806..133667817,- | ||
|ontology_enrichment_celltype=CL:0002541!2.00e-08!3 | |ontology_enrichment_celltype=CL:0002541!2.00e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;6.04e-60;3!CL:0000349;4.24e-10;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,8.17e-60,3;CL:0000349,4.44e-10,19 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.88e-21;1!UBERON:0007297;2.02e-11;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!2.00e-08!3;UBERON:0000920!2.00e-08!3;UBERON:0003937!1.58e-07!12;UBERON:0005399!1.58e-07!12;UBERON:0005153!9.04e-07!37 | |ontology_enrichment_uberon=UBERON:0000476!2.00e-08!3;UBERON:0000920!2.00e-08!3;UBERON:0003937!1.58e-07!12;UBERON:0005399!1.58e-07!12;UBERON:0005153!9.04e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.04e-60;3!UBERON:0000920;6.04e-60;3!UBERON:0006947;1.30e-27;3!UBERON:0004054;1.30e-27;3!UBERON:0000998;1.88e-21;1!UBERON:0006868;1.88e-21;1!UBERON:0001000;3.12e-21;1!UBERON:0005352;3.12e-21;1!UBERON:0005904;5.44e-21;4!UBERON:0000478;9.77e-21;24!UBERON:0005631;1.40e-18;10!UBERON:0000158;1.40e-18;10!UBERON:0000058;5.46e-09;10!UBERON:0002331;7.96e-09;10!UBERON:0003135;2.97e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,8.17e-60,3;UBERON:0006947,1.22e-27,3;UBERON:0004054,1.22e-27,3;UBERON:0003124,3.76e-26,7;UBERON:0000998,1.88e-21,1;UBERON:0006868,1.88e-21,1;UBERON:0001000,2.82e-21,1;UBERON:0005352,2.82e-21,1;UBERON:0005904,5.17e-21,4;UBERON:0000478,9.57e-21,24;UBERON:0005631,1.90e-13,14;UBERON:0000158,1.90e-13,14;UBERON:0000058,3.68e-10,19;UBERON:0000080,6.48e-10,9;UBERON:0002120,6.48e-10,9;UBERON:0004875,6.48e-10,9;UBERON:0005721,6.48e-10,9;UBERON:0005754,6.48e-10,9;UBERON:0007297,6.48e-10,9;UBERON:0002331,7.36e-09,10;UBERON:0000358,7.36e-09,10;UBERON:0000307,7.36e-09,10;UBERON:0000091,7.36e-09,10;UBERON:0000087,7.36e-09,10;UBERON:0007010,7.36e-09,10;UBERON:0007806,7.36e-09,10;UBERON:0008780,7.36e-09,10;UBERON:0005728,7.36e-09,10;UBERON:0004876,2.82e-08,11;UBERON:0003135,2.92e-08,11;UBERON:0003887,1.16e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0,0,0,0,0,0.246242116153576,0.816002764977012,0,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.71153252537342,0,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600182192168805,0,0.257640540045629,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0.232387885739037,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0.325808305310325,0,0,0,0,0.288732895522148,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0.215915916102139,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0.325942115766024,1.27600463892768,2.10674464824283,9.59462596833542,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0.611030144933625,0.593042257361244,1.35920332841153,1.8795950910982,0.067401132980677,0,0,0,0,0,2.76209081994573,1.20990716048664,0,0.505492637027904,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.677942222341597,0.137041924646751,0,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0.788662062837943,0,0,0,0.199679000498991,0.858452096273142,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.709251365692784,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961086713109252,1.72924735609633,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.443511850813194,0,0,0,0,0.118193840883968,0,0.235479278551542,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0.17071847709395,0,0,0,0,6.77419280305486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0,0,0,0,0,0,0.187967835959707,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0.12729431655633,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0.488965776731466,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0,0,0,0,0,0.246242116153576,0.816002764977012,0,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.71153252537342,0,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600182192168805,0,0.257640540045629,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0.232387885739037,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0.325808305310325,0,0,0,0,0.288732895522148,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0.215915916102139,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0.325942115766024,1.27600463892768,2.10674464824283,9.59462596833542,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0.611030144933625,0.593042257361244,1.35920332841153,1.8795950910982,0.067401132980677,0,0,0,0,0,2.76209081994573,1.20990716048664,0,0.505492637027904,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.677942222341597,0.137041924646751,0,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0.788662062837943,0,0,0,0.199679000498991,0.858452096273142,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.709251365692784,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961086713109252,1.72924735609633,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.443511850813194,0,0,0,0,0.118193840883968,0,0.235479278551542,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0.17071847709395,0,0,0,0,6.77419280305486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0,0,0,0,0,0,0.187967835959707,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0.12729431655633,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0.488965776731466,0,0,0,0 | ||
|short_description=p5@SLCO2A1 | |short_description=p5@SLCO2A1 | ||
}} | }} |
Latest revision as of 22:06, 24 September 2015
Short description: | p5@SLCO2A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLCO2A1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 242bp_to_ENST00000477061_5end |
EntrezGene: | SLCO2A1 |
HGNC: | 10955 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 8.17e-60 | 3 |
extraembryonic cell | 4.44e-10 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 8.17e-60 | 3 |
male genital duct | 1.22e-27 | 3 |
internal male genitalia | 1.22e-27 | 3 |
chorion | 3.76e-26 | 7 |
seminal vesicle | 1.88e-21 | 1 |
seminal fluid secreting gland | 1.88e-21 | 1 |
vas deferens | 2.82e-21 | 1 |
spermatic cord | 2.82e-21 | 1 |
duct of male reproductive system | 5.17e-21 | 4 |
extraembryonic structure | 9.57e-21 | 24 |
extraembryonic membrane | 1.90e-13 | 14 |
membranous layer | 1.90e-13 | 14 |
duct | 3.68e-10 | 19 |
mesonephros | 6.48e-10 | 9 |
pronephros | 6.48e-10 | 9 |
nephrogenic cord | 6.48e-10 | 9 |
pronephric mesoderm | 6.48e-10 | 9 |
rostral part of nephrogenic cord | 6.48e-10 | 9 |
presumptive pronephric mesoderm | 6.48e-10 | 9 |
umbilical cord | 7.36e-09 | 10 |
blastocyst | 7.36e-09 | 10 |
blastula | 7.36e-09 | 10 |
bilaminar disc | 7.36e-09 | 10 |
inner cell mass | 7.36e-09 | 10 |
cleaving embryo | 7.36e-09 | 10 |
connecting stalk | 7.36e-09 | 10 |
inner cell mass derived epiblast | 7.36e-09 | 10 |
extraembryonic mesoderm | 7.36e-09 | 10 |
urogenital ridge | 2.82e-08 | 11 |
male reproductive organ | 2.92e-08 | 11 |
intraembryonic coelom | 1.16e-07 | 12 |