FFCP PHASE1:Hg19::chr3:112357353..112357363,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151887 | |EntrezGene=151887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30649 | |HGNC=30649 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-409bp_to_ENST00000461431_5end | |association_with_transcript=-409bp_to_ENST00000461431_5end | ||
|cluster_id=chr3:112357353..112357363,- | |||
|coexpression_cluster_id=C1078 | |coexpression_cluster_id=C1078 | ||
|description=CAGE_peak_29_at_CCDC80_5end | |description=CAGE_peak_29_at_CCDC80_5end | ||
|id=chr3:112357353..112357363,- | |id=chr3:112357353..112357363,- | ||
|ontology_enrichment_celltype=CL:0000055!9.15e-21!180;CL:0000057!1.87e-16!75;CL:0002620!6.54e-13!23;CL:0000680!8.50e-12!57;CL:0000056!8.50e-12!57;CL:0000355!8.50e-12!57;CL:0000187!1.57e-10!54;CL:0000183!1.43e-08!59;CL:0000393!3.14e-08!60;CL:0000211!3.14e-08!60;CL:0000192!6.65e-08!42;CL:0000514!6.65e-08!42;CL:0000136!8.95e-07!15 | |ontology_enrichment_celltype=CL:0000055!9.15e-21!180;CL:0000057!1.87e-16!75;CL:0002620!6.54e-13!23;CL:0000680!8.50e-12!57;CL:0000056!8.50e-12!57;CL:0000355!8.50e-12!57;CL:0000187!1.57e-10!54;CL:0000183!1.43e-08!59;CL:0000393!3.14e-08!60;CL:0000211!3.14e-08!60;CL:0000192!6.65e-08!42;CL:0000514!6.65e-08!42;CL:0000136!8.95e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.95e-10;23!CL:0002334;6.54e-09;12!CL:1000306;1.23e-08;4!CL:0002547;1.23e-08;4!CL:0000136;3.09e-08;13!CL:0002622;3.98e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.15e-18,76;CL:0002620,3.62e-10,23;CL:0002334,6.61e-09,12;CL:1000306,8.32e-09,4;CL:0002547,8.32e-09,4;CL:0000136,1.16e-08,15;CL:0000048,1.32e-08,427;CL:0000723,3.13e-08,433;CL:0000034,9.44e-08,441;CL:0002622,3.83e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;3.89e-08;4!UBERON:0007284;3.89e-08;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;7.86e-07;5!DOID:450;7.86e-07;5!DOID:66;7.86e-07;5!DOID:423;7.86e-07;5!DOID:0080000;7.86e-07;5!DOID:11722;7.86e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.53e-07,5;DOID:450,4.53e-07,5;DOID:66,4.53e-07,5;DOID:423,4.53e-07,5;DOID:0080000,4.53e-07,5;DOID:11722,4.53e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.82e-13!83;UBERON:0002329!4.82e-13!83;UBERON:0003077!4.82e-13!83;UBERON:0003059!4.82e-13!83;UBERON:0007282!4.82e-13!83;UBERON:0009618!4.82e-13!83;UBERON:0007285!4.82e-13!83;UBERON:0004290!1.59e-12!70;UBERON:0002385!2.72e-12!63;UBERON:0001015!2.72e-12!63;UBERON:0000383!2.72e-12!63;UBERON:0001134!1.03e-11!61;UBERON:0002036!1.03e-11!61;UBERON:0003082!1.03e-11!61;UBERON:0000486!1.63e-10!82;UBERON:0002199!1.03e-08!45;UBERON:0002416!1.03e-08!45;UBERON:0004872!2.51e-08!84;UBERON:0005256!2.70e-08!143;UBERON:0000475!3.95e-08!365;UBERON:0003102!1.22e-07!95;UBERON:0002097!3.47e-07!40 | |ontology_enrichment_uberon=UBERON:0000914!4.82e-13!83;UBERON:0002329!4.82e-13!83;UBERON:0003077!4.82e-13!83;UBERON:0003059!4.82e-13!83;UBERON:0007282!4.82e-13!83;UBERON:0009618!4.82e-13!83;UBERON:0007285!4.82e-13!83;UBERON:0004290!1.59e-12!70;UBERON:0002385!2.72e-12!63;UBERON:0001015!2.72e-12!63;UBERON:0000383!2.72e-12!63;UBERON:0001134!1.03e-11!61;UBERON:0002036!1.03e-11!61;UBERON:0003082!1.03e-11!61;UBERON:0000486!1.63e-10!82;UBERON:0002199!1.03e-08!45;UBERON:0002416!1.03e-08!45;UBERON:0004872!2.51e-08!84;UBERON:0005256!2.70e-08!143;UBERON:0000475!3.95e-08!365;UBERON:0003102!1.22e-07!95;UBERON:0002097!3.47e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.23e-08;4!UBERON:0000415;1.23e-08;4!UBERON:0007240;1.23e-08;4!UBERON:0005742;1.23e-08;4!UBERON:0005734;1.23e-08;4!UBERON:0004664;1.23e-08;4!UBERON:0004663;1.23e-08;4!UBERON:0004457;6.57e-08;9!UBERON:0000042;6.57e-08;9!UBERON:0000948;4.27e-07;22!UBERON:0002199;6.94e-07;46!UBERON:0002416;6.94e-07;46!UBERON:0003978;9.76e-07;3!UBERON:0000946;9.76e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004797,8.49e-14,7;UBERON:0002199,1.31e-10,46;UBERON:0002416,1.31e-10,46;UBERON:0003102,3.49e-10,99;UBERON:0000415,8.32e-09,4;UBERON:0007240,8.32e-09,4;UBERON:0005742,8.32e-09,4;UBERON:0005734,8.32e-09,4;UBERON:0004664,8.32e-09,4;UBERON:0004663,8.32e-09,4;UBERON:0002097,1.51e-07,41;UBERON:0000948,2.29e-07,24;UBERON:0005498,2.29e-07,24;UBERON:0004140,2.29e-07,24;UBERON:0009881,2.29e-07,24;UBERON:0004141,2.29e-07,24;UBERON:0003084,2.29e-07,24;UBERON:0007005,2.29e-07,24;UBERON:0004139,2.29e-07,24;UBERON:0004291,2.29e-07,24 | |||
|phase1_expression=0.363356758541113,4.49611100171065,1.12763523276777,0,4.02264984984559,2.61701557230111,0,1.89515962028049,1.30592814099919,0,0,0.218441372130172,0.527533956456907,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0,0.369363174230364,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,0,1.15076305659177,0.722878304769133,2.00535164254356,1.44846518960824,0.795285947051099,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,1.77282716330412,2.64818361626438,10.0392817262085,2.4826786753885,2.80338800071154,1.06748995729705,0.49333509683432,0,0.134710672069688,0,0,1.15235184896,0,0,0.570471821544449,0.448346041655403,0.704606991862589,0.647491777472526,0.140450806702248,0.61246251376468,0,1.13658359293342,0,0,0,0,0,0.125118519871964,1.38532057742091,1.31693286264251,0.612975591598039,0,0,2.69084453533293,0.640672166455702,2.96704661623387,4.20127534518163,1.75189299705346,2.57640540045629,0.930584281657949,2.36286865137773,1.65642908774038,3.28163906517349,1.10459878370759,1.93975268182574,4.61512470271599,2.92181084860157,0.508681776931463,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0.928735856063958,3.60939740834793,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0.285826432630578,0,0,0.1466765716419,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0.285955987316295,0,0,0.977208552881205,0.355391948742546,0,0.301439377059586,0,0.899756920638513,0,0,0,0.239624855491583,1.14861935834114,2.85273810081437,1.44781306667579,1.2328579353023,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0.500170521059677,0,0.207970861530807,3.7470087647404,0.315404830067869,1.40569697991256,0.902838299183157,0,0,0,0.737476674166813,0.0868836144680828,0,0,0,0,0,0,0,0.604780586659361,0.744323423456331,1.38115775959256,1.12264037773229,2.94720043288112,0,4.02134802859019,0,1.3878872442239,1.24293207719189,1.72467027628999,0.519254429183621,2.44041794765914,0,0,0.0920809889358963,2.75554675595056,3.09554985611419,2.49136388422906,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0.650060246036521,4.82051789532479,0,0.770243085573222,0.614014698904518,0.413509717453592,0.322260734604821,0.435050081742686,0.0852266274161009,0.178064071293475,0,0,0.127612712494584,0,2.32422774648643,8.81474571125792,0.6970372701606,0.924100740528266,0.532306030317022,0.869932992075073,0.18532421910392,1.14499909393593,0.372158369359667,0,0.571890581771475,0,1.71175595213568,0,0,0.359744915166629,0.54907405947211,0.117812402345686,1.2130948894399,0,0,0,0.974853958525138,1.05650146756755,2.04749867111979,1.69686518344455,1.13008116620243,0,0,1.31535265576129,0.578775534266688,1.31178950409327,0.811641507850816,0.92947049429925,1.12678241012897,0.860468113224309,0.392996164052485,0.35667105148125,0.709522128141196,2.11107635297664,2.30506425071931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0.140669416410513,0.111308705022906,0,0,1.19548792950642,0.276283915531148,0,0,0,2.79935628895627,0,0,0,0.789147245095469,0,3.33410970433911,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552896299656123,0.886642856860642,0,0,0,0.769502585037971,0,0,0.0897576444097721,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,2.16388639742091,0,0.265372693510018,0.611030144933625,0,0,0,0.202203398942031,1.60515529459758,0.468528891450678,0,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0.435296032902013,0.52418000472609,0.343972064943233,0,0,0,0.193978032976839,0,0,0.274083849293502,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0,0.229073192331831,0,0,0.869767748958028,0,0,0,0.203996435272644,0,0,0.273810757783986,0,0.429765441419957,0,3.0721064139948,1.14580212005842,2.87149209830726,0,0.429226048136571,0.223171457441873,0.134366944973453,2.88239906833923,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,2.17199840701485,0.864221491201268,1.95952416065645,0,0,0.681552087141687,0,0,0,0.517131825446202,0,0,0,0.106787412567695,0.314408610199332,0,0.992332043623902,0,0,0,1.08803560673895,1.0027595760908,0.306345576763462,0.327872630709804,0,0,0.122026264901963,0,1.72022758707021,0.332787154610557,0.434674820589684,0,0,0,0,0,0,0,0.597019211547496,1.8697064787778,1.66441758450784,1.7046270474758,2.26411111577318,0,3.66144109435078,2.26846385644859,0.466311601748341,0.887130899937803,0.159296767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| ||
|short_description=p29@CCDC80 | |short_description=p29@CCDC80 | ||
}} | }} |
Latest revision as of 14:11, 19 September 2015
Short description: | p29@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_CCDC80_5end |
Coexpression cluster: | C1078_Cardiac_Preadipocyte_Fibroblast_Chondrocyte_Synoviocyte_Ewing_Smooth |
Association with transcript: | -409bp_to_ENST00000461431_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.15e-18 | 76 |
skin fibroblast | 3.62e-10 | 23 |
preadipocyte | 6.61e-09 | 12 |
fibroblast of tunica adventitia of artery | 8.32e-09 | 4 |
fibroblast of the aortic adventitia | 8.32e-09 | 4 |
fat cell | 1.16e-08 | 15 |
multi fate stem cell | 1.32e-08 | 427 |
somatic stem cell | 3.13e-08 | 433 |
stem cell | 9.44e-08 | 441 |
prostate stromal cell | 3.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel layer | 8.49e-14 | 7 |
integument | 1.31e-10 | 46 |
integumental system | 1.31e-10 | 46 |
surface structure | 3.49e-10 | 99 |
artery wall | 8.32e-09 | 4 |
tunica adventitia of artery | 8.32e-09 | 4 |
adventitia | 8.32e-09 | 4 |
tunica adventitia of blood vessel | 8.32e-09 | 4 |
aorta tunica adventitia | 8.32e-09 | 4 |
aorta wall | 8.32e-09 | 4 |
skin of body | 1.51e-07 | 41 |
heart | 2.29e-07 | 24 |
primitive heart tube | 2.29e-07 | 24 |
primary heart field | 2.29e-07 | 24 |
anterior lateral plate mesoderm | 2.29e-07 | 24 |
heart tube | 2.29e-07 | 24 |
heart primordium | 2.29e-07 | 24 |
cardiac mesoderm | 2.29e-07 | 24 |
cardiogenic plate | 2.29e-07 | 24 |
heart rudiment | 2.29e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.53e-07 | 5 |
myotonic disease | 4.53e-07 | 5 |
muscle tissue disease | 4.53e-07 | 5 |
myopathy | 4.53e-07 | 5 |
muscular disease | 4.53e-07 | 5 |
myotonic dystrophy | 4.53e-07 | 5 |