FFCP PHASE1:Hg19::chr19:20655841..20655854,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:20655841..20655854,+
|short_description=p@chr19:20655841..20655854,+
|description=CAGE_peak_at_chr19:20655841..20655854,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:20655841..20655854,+ | |||
|description=CAGE_peak_at_chr19:20655841..20655854,+ | |||
|id=chr19:20655841..20655854,+ | |||
|ontology_enrichment_celltype=CL:0000054!3.04e-07!2;CL:0000137!3.04e-07!2;CL:0000092!3.04e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000054;2.07e-10;2!CL:0000137;2.07e-10;2!CL:0000092;2.07e-10;2!CL:0000047;2.85e-10;2!CL:0002178;1.82e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,2.07e-10,2;CL:0000137,2.07e-10,2;CL:0000092,2.07e-10,2;CL:0002178,1.82e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.88e-07;3 | |||
|ontology_enrichment_disease=DOID:200!3.04e-07!2;DOID:4305!3.04e-07!2;DOID:154!6.19e-07!2;DOID:4236!6.19e-07!2;DOID:3350!9.28e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:0060085;1.88e-19;1!DOID:3165;1.88e-19;1!DOID:0060121;1.88e-19;1!DOID:2438;1.88e-19;1!DOID:4418;1.88e-19;1!DOID:200;2.07e-10;2!DOID:4305;2.07e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.88e-19,1;DOID:3165,1.88e-19,1;DOID:0060121,1.88e-19,1;DOID:2438,1.88e-19,1;DOID:4418,1.88e-19,1;DOID:200,2.07e-10,2;DOID:4305,2.07e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.71e-07!2;UBERON:0002757!1.71e-07!2;UBERON:0010134!1.71e-07!2;UBERON:0002784!1.71e-07!2;UBERON:0005408!1.71e-07!2;UBERON:0001899!1.71e-07!2;UBERON:0002950!4.89e-07!2;UBERON:0001891!4.89e-07!2;UBERON:0009616!4.89e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;6.82e-37;2!UBERON:0002757;6.82e-37;2!UBERON:0010134;6.82e-37;2!UBERON:0005408;6.82e-37;2!UBERON:0001899;6.82e-37;2!UBERON:0007195;1.08e-19;1!UBERON:0003296;5.15e-19;4!UBERON:0010133;5.15e-19;4!UBERON:0002784;5.15e-19;4!UBERON:0001894;2.69e-11;7!UBERON:0002371;5.00e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.94e-37,2;UBERON:0002757,3.94e-37,2;UBERON:0010134,3.94e-37,2;UBERON:0005408,3.94e-37,2;UBERON:0001899,3.94e-37,2;UBERON:0007195,1.08e-19,1;UBERON:0003296,3.92e-19,4;UBERON:0010133,3.92e-19,4;UBERON:0002784,3.92e-19,4;UBERON:0001894,2.30e-11,7;UBERON:0006222,2.30e-11,7 | |||
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| ||
|short_description=p@chr19:20655841..20655854,+ | |||
}} | }} |
Latest revision as of 05:37, 26 July 2015
Short description: | p@chr19:20655841..20655854, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:20655841..20655854, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 2.07e-10 | 2 |
osteocyte | 2.07e-10 | 2 |
osteoclast | 2.07e-10 | 2 |
epithelial cell of stomach | 1.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pineal body | 3.94e-37 | 2 |
regional part of epithalamus | 3.94e-37 | 2 |
secretory circumventricular organ | 3.94e-37 | 2 |
circumventricular organ | 3.94e-37 | 2 |
epithalamus | 3.94e-37 | 2 |
stroma of bone marrow | 1.08e-19 | 1 |
gland of diencephalon | 3.92e-19 | 4 |
neuroendocrine gland | 3.92e-19 | 4 |
regional part of diencephalon | 3.92e-19 | 4 |
diencephalon | 2.30e-11 | 7 |
future diencephalon | 2.30e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.88e-19 | 1 |
skin benign neoplasm | 1.88e-19 | 1 |
integumentary system benign neoplasm | 1.88e-19 | 1 |
dermis tumor | 1.88e-19 | 1 |
cutaneous fibrous histiocytoma | 1.88e-19 | 1 |
giant cell tumor | 2.07e-10 | 2 |
bone giant cell tumor | 2.07e-10 | 2 |