FFCP PHASE1:Hg19::chr2:242716231..242716254,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64090 | |EntrezGene=64090 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24869 | |HGNC=24869 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H3Q3 | |UniProt=Q9H3Q3 | ||
|association_with_transcript=0bp_to_ENST00000192314,NM_022134,uc002wcj.1_5end | |association_with_transcript=0bp_to_ENST00000192314,NM_022134,uc002wcj.1_5end | ||
|cluster_id=chr2:242716231..242716254,+ | |||
|coexpression_cluster_id=C201 | |coexpression_cluster_id=C201 | ||
|description=CAGE_peak_1_at_GAL3ST2_5end | |description=CAGE_peak_1_at_GAL3ST2_5end | ||
|id=chr2:242716231..242716254,+ | |id=chr2:242716231..242716254,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002253;3.59e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,3.48e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.78e-13;1!UBERON:0006242;3.76e-13;1!UBERON:0006595;7.60e-08;86 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;2.78e-13;1!DOID:1357;2.78e-13;1!DOID:3493;3.59e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.62e-13,1;DOID:1357,2.62e-13,1;DOID:3493,3.70e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000059!5.38e-19!11;UBERON:0004907!2.91e-14!5;UBERON:0000160!1.65e-13!27;UBERON:0004921!9.89e-13!129;UBERON:0004185!9.89e-13!129;UBERON:0001155!1.96e-12!9;UBERON:0005409!2.73e-12!35;UBERON:0001007!8.66e-11!155;UBERON:0001555!8.66e-11!155;UBERON:0007026!8.66e-11!155;UBERON:0001052!2.37e-10!4;UBERON:0003127!8.75e-10!2;UBERON:0000341!1.18e-09!2;UBERON:0004119!1.98e-09!169;UBERON:0000925!1.98e-09!169;UBERON:0006595!1.98e-09!169;UBERON:0006562!6.70e-09!11;UBERON:0000077!3.80e-07!130 | |ontology_enrichment_uberon=UBERON:0000059!5.38e-19!11;UBERON:0004907!2.91e-14!5;UBERON:0000160!1.65e-13!27;UBERON:0004921!9.89e-13!129;UBERON:0004185!9.89e-13!129;UBERON:0001155!1.96e-12!9;UBERON:0005409!2.73e-12!35;UBERON:0001007!8.66e-11!155;UBERON:0001555!8.66e-11!155;UBERON:0007026!8.66e-11!155;UBERON:0001052!2.37e-10!4;UBERON:0003127!8.75e-10!2;UBERON:0000341!1.18e-09!2;UBERON:0004119!1.98e-09!169;UBERON:0000925!1.98e-09!169;UBERON:0006595!1.98e-09!169;UBERON:0006562!6.70e-09!11;UBERON:0000077!3.80e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0000059;1.98e-38;11!UBERON:0001155;4.58e-33;9!UBERON:0004921;2.71e-26;33!UBERON:0005409;1.27e-24;22!UBERON:0003127;6.39e-24;2!UBERON:0000341;9.63e-24;2!UBERON:0000160;2.08e-23;17!UBERON:0004907;1.04e-21;5!UBERON:0001154;2.78e-13;1!UBERON:0001153;2.78e-13;1!UBERON:0001764;2.78e-13;1!UBERON:0009854;2.78e-13;1!UBERON:0001825;2.78e-13;1!UBERON:0002372;3.33e-13;1!UBERON:0001961;3.33e-13;1!UBERON:0001744;3.33e-13;1!UBERON:0001042;3.33e-13;1!UBERON:0001735;3.33e-13;1!UBERON:0001052;1.27e-12;4!UBERON:0001555;1.92e-09;54!UBERON:0000974;1.47e-08;6!UBERON:0001007;1.25e-07;81!UBERON:0003126;1.65e-07;7!UBERON:0001005;1.65e-07;7!UBERON:0006562;3.09e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,2.12e-38,11;UBERON:0001155,4.58e-33,9;UBERON:0003127,5.35e-24,2;UBERON:0000341,1.22e-23,2;UBERON:0000160,2.17e-23,17;UBERON:0005409,1.06e-21,25;UBERON:0004907,1.11e-21,5;UBERON:0001764,2.62e-13,1;UBERON:0001825,2.62e-13,1;UBERON:0001154,2.95e-13,1;UBERON:0001153,2.95e-13,1;UBERON:0001045,2.95e-13,1;UBERON:0002372,3.33e-13,1;UBERON:0001961,3.33e-13,1;UBERON:0001744,3.33e-13,1;UBERON:0001735,3.33e-13,1;UBERON:0001052,1.31e-12,4;UBERON:0004921,1.70e-10,118;UBERON:0001007,5.56e-10,145;UBERON:0001555,5.56e-10,145;UBERON:0007026,5.56e-10,145;UBERON:0004119,6.78e-09,160;UBERON:0000925,6.78e-09,160;UBERON:0006595,6.78e-09,160;UBERON:0003126,1.57e-07,7;UBERON:0001005,1.57e-07,7 | |||
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| ||
|short_description=p1@GAL3ST2 | |short_description=p1@GAL3ST2 | ||
}} | }} |
Latest revision as of 11:26, 16 September 2015
Short description: | p1@GAL3ST2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GAL3ST2_5end |
Coexpression cluster: | C201_colon_small_adenocarcinoma_duodenum_temporal_signet_gall |
Association with transcript: | 0bp_to_ENST00000192314, NM_022134, uc002wcj.1_5end |
EntrezGene: | GAL3ST2 |
HGNC: | 24869 |
UniProt: | Q9H3Q3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 3.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
large intestine | 2.12e-38 | 11 |
colon | 4.58e-33 | 9 |
open tracheal system trachea | 5.35e-24 | 2 |
throat | 1.22e-23 | 2 |
intestine | 2.17e-23 | 17 |
gastrointestinal system | 1.06e-21 | 25 |
lower digestive tract | 1.11e-21 | 5 |
maxillary sinus | 2.62e-13 | 1 |
paranasal sinus | 2.62e-13 | 1 |
vermiform appendix | 2.95e-13 | 1 |
caecum | 2.95e-13 | 1 |
midgut | 2.95e-13 | 1 |
tonsil | 3.33e-13 | 1 |
mucosa-associated lymphoid tissue | 3.33e-13 | 1 |
lymphoid tissue | 3.33e-13 | 1 |
tonsillar ring | 3.33e-13 | 1 |
rectum | 1.31e-12 | 4 |
subdivision of digestive tract | 1.70e-10 | 118 |
digestive system | 5.56e-10 | 145 |
digestive tract | 5.56e-10 | 145 |
primitive gut | 5.56e-10 | 145 |
endoderm-derived structure | 6.78e-09 | 160 |
endoderm | 6.78e-09 | 160 |
presumptive endoderm | 6.78e-09 | 160 |
trachea | 1.57e-07 | 7 |
respiratory airway | 1.57e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.62e-13 | 1 |
maxillary sinus cancer | 2.62e-13 | 1 |
signet ring cell adenocarcinoma | 3.70e-07 | 2 |