FFCP PHASE1:Hg19::chr2:220492638..220492673,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6508 | |EntrezGene=6508 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11029 | |HGNC=11029 | ||
|TSSclassifier=strong | |||
|UniProt=B4DR53,P48751 | |UniProt=B4DR53,P48751 | ||
|association_with_transcript=-6bp_to_AK299109,BC136384,BC171760_5end | |association_with_transcript=-6bp_to_AK299109,BC136384,BC171760_5end | ||
|cluster_id=chr2:220492638..220492673,+ | |||
|coexpression_cluster_id=C56 | |coexpression_cluster_id=C56 | ||
|description=CAGE_peak_5_at_SLC4A3_5end | |description=CAGE_peak_5_at_SLC4A3_5end | ||
|id=chr2:220492638..220492673,+ | |id=chr2:220492638..220492673,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002032;1.42e-08;1!CL:0000557;1.42e-08;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;9.08e-18;4!UBERON:0007284;9.08e-18;4!UBERON:0004140;3.06e-09;1!UBERON:0010227;3.58e-09;1!UBERON:0010226;6.90e-09;1!UBERON:0006601;1.08e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;1.73e-16;2!DOID:178;4.52e-09;1!DOID:326;4.52e-09;1!DOID:3978;4.52e-09;1!DOID:3394;4.52e-09;1!DOID:5844;4.52e-09;1!DOID:1287;1.09e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.73e-16,2;DOID:178,4.52e-09,1;DOID:326,4.52e-09,1;DOID:3978,4.52e-09,1;DOID:3394,4.52e-09,1;DOID:5844,4.52e-09,1;DOID:1287,1.09e-08,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0007100;1.57e-23;25!UBERON:0003978;1.75e-23;3!UBERON:0000946;1.75e-23;3!UBERON:0004151;1.81e-23;3!UBERON:0000369;4.35e-17;4!UBERON:0002435;4.35e-17;4!UBERON:0003296;4.35e-17;4!UBERON:0010133;4.35e-17;4!UBERON:0000204;4.35e-17;4!UBERON:0002081;2.44e-16;2!UBERON:0002133;3.06e-16;2!UBERON:0000007;9.50e-16;2!UBERON:0002420;2.43e-13;9!UBERON:0007245;2.43e-13;9!UBERON:0010009;2.43e-13;9!UBERON:0010011;2.43e-13;9!UBERON:0000454;2.43e-13;9!UBERON:0000948;4.45e-12;22!UBERON:0005383;8.26e-11;3!UBERON:0005382;8.26e-11;3!UBERON:0000073;3.34e-10;53!UBERON:0002616;3.34e-10;53!UBERON:0001894;5.32e-10;7!UBERON:0009663;5.32e-10;7!UBERON:0002079;3.58e-09;1!UBERON:0002135;4.52e-09;1!UBERON:0002146;5.28e-09;1!UBERON:0005623;5.28e-09;1!UBERON:0002084;6.90e-09;1!UBERON:0001874;6.90e-09;1!UBERON:0002134;6.90e-09;1!UBERON:0002082;6.90e-09;1!UBERON:0005208;6.90e-09;1!UBERON:0004145;6.90e-09;1!UBERON:0005946;6.90e-09;1!UBERON:0005965;6.90e-09;1!UBERON:0002078;6.90e-09;1!UBERON:0001882;1.42e-08;1!UBERON:0005403;1.42e-08;1!UBERON:0002780;3.93e-08;41!UBERON:0001890;3.93e-08;41!UBERON:0000125;6.94e-08;9!UBERON:0002308;6.94e-08;9!UBERON:0010313;2.10e-07;10!UBERON:0000349;8.05e-07;5!UBERON:0000955;9.51e-07;68 | |||
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| ||
|short_description=p5@SLC4A3 | |short_description=p5@SLC4A3 | ||
}} | }} |
Latest revision as of 22:26, 24 September 2015
Short description: | p5@SLC4A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC4A3_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | -6bp_to_AK299109, BC136384, BC171760_5end |
EntrezGene: | SLC4A3 |
HGNC: | 11029 |
UniProt: | B4DR53P48751 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.73e-16 | 2 |
vascular disease | 4.52e-09 | 1 |
ischemia | 4.52e-09 | 1 |
extrinsic cardiomyopathy | 4.52e-09 | 1 |
myocardial ischemia | 4.52e-09 | 1 |
myocardial infarction | 4.52e-09 | 1 |
cardiovascular system disease | 1.09e-08 | 4 |