FFCP PHASE1:Hg19::chr2:163008749..163008765,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2641 | |EntrezGene=2641 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4191 | |HGNC=4191 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002ucc.2_5end | |association_with_transcript=0bp_to_uc002ucc.2_5end | ||
|cluster_id=chr2:163008749..163008765,- | |||
|coexpression_cluster_id=C112 | |coexpression_cluster_id=C112 | ||
|description=CAGE_peak_1_at_GCG_5end | |description=CAGE_peak_1_at_GCG_5end | ||
|id=chr2:163008749..163008765,- | |id=chr2:163008749..163008765,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.62e-11;1!UBERON:0001045;1.54e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.40e-19!35;UBERON:0000160!3.39e-14!27;UBERON:0000059!4.52e-12!11;UBERON:0000341!4.05e-11!2;UBERON:0001155!9.60e-10!9;UBERON:0000974!2.62e-08!10;UBERON:0004177!4.60e-07!7;UBERON:0004921!5.00e-07!129;UBERON:0004185!5.00e-07!129 | |ontology_enrichment_uberon=UBERON:0005409!3.40e-19!35;UBERON:0000160!3.39e-14!27;UBERON:0000059!4.52e-12!11;UBERON:0000341!4.05e-11!2;UBERON:0001155!9.60e-10!9;UBERON:0000974!2.62e-08!10;UBERON:0004177!4.60e-07!7;UBERON:0004921!5.00e-07!129;UBERON:0004185!5.00e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;3.43e-40;22!UBERON:0000160;5.37e-33;17!UBERON:0004921;7.17e-25;33!UBERON:0000059;1.77e-21;11!UBERON:0002108;3.95e-18;4!UBERON:0001155;4.22e-17;9!UBERON:0001555;1.13e-10;54!UBERON:0001154;1.54e-10;1!UBERON:0001153;1.54e-10;1!UBERON:0009854;1.54e-10;1!UBERON:0000922;2.67e-09;49!UBERON:0000945;9.01e-09;5!UBERON:0010039;9.01e-09;5!UBERON:0004907;1.89e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.15e-35,25;UBERON:0000160,5.49e-33,17;UBERON:0000059,1.81e-21,11;UBERON:0002108,3.95e-18,4;UBERON:0001155,4.31e-17,9;UBERON:0001154,1.61e-10,1;UBERON:0001153,1.61e-10,1;UBERON:0001045,1.61e-10,1;UBERON:0004921,1.03e-09,118;UBERON:0004907,1.93e-08,5;UBERON:0011216,3.43e-08,223;UBERON:0001007,1.46e-07,145;UBERON:0001555,1.46e-07,145;UBERON:0007026,1.46e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24605133930215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54657762555539,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606802608747567,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9099766904916,8.93421401483726,93.4876121748447,0,0,0,0,0.802577647298789,0,0,0,0,0,488.802492836602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3501.04013500354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0.76280561296425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30402446176905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23457967189298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,676.009619716625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1763331306994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4794432940146,0.485710993059139,0,0,124.033654681004,0,0,0,38.8957756864041,47.2088650688548,0,0,0,0,0,0,0,0,0.386747327841463,0,0,0,0,34.3258102475863,0,0,0,0,0,655.464255398581,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,1.42838658878244,0.193766729508018,4.46937942930177,0,0,0.404234377916439,0,0.342233301085281,0,0,0,0,0,0,0,4.69281884806909,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24605133930215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54657762555539,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606802608747567,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9099766904916,8.93421401483726,93.4876121748447,0,0,0,0,0.802577647298789,0,0,0,0,0,488.802492836602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3501.04013500354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0.76280561296425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30402446176905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23457967189298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,676.009619716625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1763331306994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4794432940146,0.485710993059139,0,0,124.033654681004,0,0,0,38.8957756864041,47.2088650688548,0,0,0,0,0,0,0,0,0.386747327841463,0,0,0,0,34.3258102475863,0,0,0,0,0,655.464255398581,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,1.42838658878244,0.193766729508018,4.46937942930177,0,0,0.404234377916439,0,0.342233301085281,0,0,0,0,0,0,0,4.69281884806909,0,0,0,0,0 | ||
|short_description=p1@GCG | |short_description=p1@GCG | ||
}} | }} |
Latest revision as of 21:40, 17 September 2015
Short description: | p1@GCG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GCG_5end |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | 0bp_to_uc002ucc.2_5end |
EntrezGene: | GCG |
HGNC: | 4191 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.15e-35 | 25 |
intestine | 5.49e-33 | 17 |
large intestine | 1.81e-21 | 11 |
small intestine | 3.95e-18 | 4 |
colon | 4.31e-17 | 9 |
vermiform appendix | 1.61e-10 | 1 |
caecum | 1.61e-10 | 1 |
midgut | 1.61e-10 | 1 |
subdivision of digestive tract | 1.03e-09 | 118 |
lower digestive tract | 1.93e-08 | 5 |
organ system subdivision | 3.43e-08 | 223 |
digestive system | 1.46e-07 | 145 |
digestive tract | 1.46e-07 | 145 |
primitive gut | 1.46e-07 | 145 |