FFCP PHASE1:Hg19::chr2:154449717..154449762,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=38bp_to_ENST00000424322_5end | |association_with_transcript=38bp_to_ENST00000424322_5end | ||
|cluster_id=chr2:154449717..154449762,- | |||
|coexpression_cluster_id=C479 | |coexpression_cluster_id=C479 | ||
|description=CAGE_peak_3_at_ENST00000424322_5end | |description=CAGE_peak_3_at_ENST00000424322_5end | ||
|id=chr2:154449717..154449762,- | |id=chr2:154449717..154449762,- | ||
|ontology_enrichment_celltype=CL:0000054!5.51e-12!2;CL:0000137!5.51e-12!2;CL:0000092!5.51e-12!2;CL:0002178!3.95e-08!3;CL:0000319!5.13e-07!1;CL:0000066!5.48e-07!254;CL:1001319!9.48e-07!1;CL:1000600!9.48e-07!1 | |ontology_enrichment_celltype=CL:0000054!5.51e-12!2;CL:0000137!5.51e-12!2;CL:0000092!5.51e-12!2;CL:0002178!3.95e-08!3;CL:0000319!5.13e-07!1;CL:0000066!5.48e-07!254;CL:1001319!9.48e-07!1;CL:1000600!9.48e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000319;8.01e-18;1!CL:0000054;1.38e-09;2!CL:0000159;1.38e-09;2!CL:0000137;1.38e-09;2!CL:0000092;1.38e-09;2!CL:1000415;1.38e-09;2!CL:0000082;1.70e-08;19!CL:0000322;6.14e-07;3!CL:0002178;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,5.26e-18,1;CL:0000054,9.46e-10,2;CL:0000137,9.46e-10,2;CL:0000092,9.46e-10,2;CL:1000415,1.03e-09,2;CL:0000159,1.12e-09,2;CL:0000082,1.62e-08,19;CL:0000322,6.14e-07,3;CL:0002178,9.12e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0001041;6.07e-14;30!UBERON:0004161;5.07e-07;11 | |||
|ontology_enrichment_disease=DOID:305!1.14e-17!106;DOID:0050687!2.46e-16!143;DOID:162!1.64e-15!235;DOID:14566!4.67e-15!239;DOID:200!5.51e-12!2;DOID:4305!5.51e-12!2;DOID:0050615!1.88e-08!16;DOID:7!1.24e-07!39;DOID:299!2.95e-07!25;DOID:5662!4.09e-07!1;DOID:0060085!4.58e-07!1;DOID:3165!4.58e-07!1;DOID:0060121!4.58e-07!1;DOID:2438!4.58e-07!1;DOID:4418!4.58e-07!1;DOID:3030!5.13e-07!1;DOID:0050619!6.08e-07!1;DOID:1357!6.08e-07!1 | |ontology_enrichment_disease=DOID:305!1.14e-17!106;DOID:0050687!2.46e-16!143;DOID:162!1.64e-15!235;DOID:14566!4.67e-15!239;DOID:200!5.51e-12!2;DOID:4305!5.51e-12!2;DOID:0050615!1.88e-08!16;DOID:7!1.24e-07!39;DOID:299!2.95e-07!25;DOID:5662!4.09e-07!1;DOID:0060085!4.58e-07!1;DOID:3165!4.58e-07!1;DOID:0060121!4.58e-07!1;DOID:2438!4.58e-07!1;DOID:4418!4.58e-07!1;DOID:3030!5.13e-07!1;DOID:0050619!6.08e-07!1;DOID:1357!6.08e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:5662;2.66e-18;1!DOID:0060085;8.01e-18;1!DOID:0050619;8.01e-18;1!DOID:3165;8.01e-18;1!DOID:0060121;8.01e-18;1!DOID:2438;8.01e-18;1!DOID:3030;8.01e-18;1!DOID:4418;8.01e-18;1!DOID:1357;8.01e-18;1!DOID:0050615;6.54e-17;16!DOID:1324;1.31e-10;15!DOID:3910;8.68e-10;2!DOID:200;1.38e-09;2!DOID:4305;1.38e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,2.66e-18,1;DOID:0060085,3.75e-18,1;DOID:3165,3.75e-18,1;DOID:0060121,3.75e-18,1;DOID:2438,3.75e-18,1;DOID:4418,3.75e-18,1;DOID:3030,5.26e-18,1;DOID:0050619,8.72e-18,1;DOID:1357,8.72e-18,1;DOID:0050615,6.15e-17,16;DOID:1324,1.23e-10,15;DOID:3910,8.69e-10,2;DOID:200,9.46e-10,2;DOID:4305,9.46e-10,2;DOID:305,1.80e-09,106;DOID:0050687,7.53e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002294!2.53e-07!7;UBERON:0001173!2.53e-07!7;UBERON:0004912!2.53e-07!7;UBERON:0000344!3.91e-07!12;UBERON:0001764!6.08e-07!1;UBERON:0001825!6.08e-07!1;UBERON:0007195!7.60e-07!1;UBERON:0004645!9.48e-07!1;UBERON:0001256!9.48e-07!1;UBERON:0001259!9.48e-07!1 | |ontology_enrichment_uberon=UBERON:0002294!2.53e-07!7;UBERON:0001173!2.53e-07!7;UBERON:0004912!2.53e-07!7;UBERON:0000344!3.91e-07!12;UBERON:0001764!6.08e-07!1;UBERON:0001825!6.08e-07!1;UBERON:0007195!7.60e-07!1;UBERON:0004645!9.48e-07!1;UBERON:0001256!9.48e-07!1;UBERON:0001259!9.48e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;8.01e-18;1!UBERON:0001764;8.01e-18;1!UBERON:0001825;8.01e-18;1!UBERON:0004903;8.68e-10;2!UBERON:0002173;8.68e-10;2!UBERON:0002186;8.68e-10;2!UBERON:0004802;1.70e-08;19!UBERON:0000115;1.70e-08;19!UBERON:0002048;2.07e-07;22!UBERON:0004807;2.07e-07;22!UBERON:0000117;2.07e-07;22!UBERON:0000171;2.07e-07;22!UBERON:0000170;2.07e-07;22!UBERON:0004821;6.14e-07;3!UBERON:0007499;6.14e-07;3!UBERON:0003215;6.14e-07;3!UBERON:0010368;6.14e-07;3!UBERON:0009911;6.14e-07;3!UBERON:0002299;6.14e-07;3!UBERON:0006524;6.14e-07;3!UBERON:0008874;6.14e-07;3!UBERON:0002169;6.14e-07;3!UBERON:0004894;6.14e-07;3!UBERON:0002110;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,8.72e-18,1;UBERON:0001825,8.72e-18,1;UBERON:0007195,1.70e-17,1;UBERON:0004903,8.69e-10,2;UBERON:0002173,8.69e-10,2;UBERON:0002186,8.69e-10,2;UBERON:0004802,1.62e-08,19;UBERON:0000115,1.62e-08,19;UBERON:0002048,1.98e-07,22;UBERON:0000117,1.98e-07,22;UBERON:0000171,1.98e-07,22;UBERON:0000170,1.98e-07,22;UBERON:0005597,1.98e-07,22;UBERON:0000118,1.98e-07,22;UBERON:0005911,4.14e-07,82;UBERON:0004821,6.14e-07,3;UBERON:0003215,6.14e-07,3;UBERON:0010368,6.14e-07,3;UBERON:0009911,6.14e-07,3;UBERON:0002299,6.14e-07,3;UBERON:0006524,6.14e-07,3;UBERON:0008874,6.14e-07,3;UBERON:0002169,6.14e-07,3;UBERON:0004894,6.14e-07,3;UBERON:0002110,6.88e-07,3;UBERON:0006242,6.88e-07,3 | |||
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|short_description=p3@ENST00000424322 | |short_description=p3@ENST00000424322 | ||
}} | }} |
Latest revision as of 01:31, 29 July 2015
Short description: | p3@ENST00000424322 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000424322_5end |
Coexpression cluster: | C479_pleomorphic_mesothelioma_cholangiocellular_melanoma_Saos2_serous_glioblastoma |
Association with transcript: | 38bp_to_ENST00000424322_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 5.26e-18 | 1 |
bone matrix secreting cell | 9.46e-10 | 2 |
osteocyte | 9.46e-10 | 2 |
osteoclast | 9.46e-10 | 2 |
epithelial cell of gall bladder | 1.03e-09 | 2 |
seromucus secreting cell | 1.12e-09 | 2 |
epithelial cell of lung | 1.62e-08 | 19 |
pneumocyte | 6.14e-07 | 3 |
epithelial cell of stomach | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 8.72e-18 | 1 |
paranasal sinus | 8.72e-18 | 1 |
stroma of bone marrow | 1.70e-17 | 1 |
bronchoalveolar duct junction | 8.69e-10 | 2 |
alveolar duct | 8.69e-10 | 2 |
bronchiole | 8.69e-10 | 2 |
respiratory tract epithelium | 1.62e-08 | 19 |
lung epithelium | 1.62e-08 | 19 |
lung | 1.98e-07 | 22 |
respiratory tube | 1.98e-07 | 22 |
respiration organ | 1.98e-07 | 22 |
pair of lungs | 1.98e-07 | 22 |
lung primordium | 1.98e-07 | 22 |
lung bud | 1.98e-07 | 22 |
endo-epithelium | 4.14e-07 | 82 |
pulmonary alveolus epithelium | 6.14e-07 | 3 |
alveolus | 6.14e-07 | 3 |
pulmonary lobule | 6.14e-07 | 3 |
lobule | 6.14e-07 | 3 |
alveolus of lung | 6.14e-07 | 3 |
alveolar system | 6.14e-07 | 3 |
pulmonary acinus | 6.14e-07 | 3 |
alveolar sac | 6.14e-07 | 3 |
alveolar wall | 6.14e-07 | 3 |
gallbladder | 6.88e-07 | 3 |
gall bladder primordium | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 2.66e-18 | 1 |
organ system benign neoplasm | 3.75e-18 | 1 |
skin benign neoplasm | 3.75e-18 | 1 |
integumentary system benign neoplasm | 3.75e-18 | 1 |
dermis tumor | 3.75e-18 | 1 |
cutaneous fibrous histiocytoma | 3.75e-18 | 1 |
mucinous adenocarcinoma | 5.26e-18 | 1 |
paranasal sinus cancer | 8.72e-18 | 1 |
maxillary sinus cancer | 8.72e-18 | 1 |
respiratory system cancer | 6.15e-17 | 16 |
lung cancer | 1.23e-10 | 15 |
lung adenocarcinoma | 8.69e-10 | 2 |
giant cell tumor | 9.46e-10 | 2 |
bone giant cell tumor | 9.46e-10 | 2 |
carcinoma | 1.80e-09 | 106 |
cell type cancer | 7.53e-07 | 143 |