FFCP PHASE1:Hg19::chr19:1652555..1652568,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:1652555..1652568,-
|short_description=p2@TCF3
|description=CAGE_peak_2_at_TCF3_5end
|association_with_transcript=-227bp_to_NM_003200_5end
|EntrezGene=692...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6929 | |EntrezGene=6929 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11633 | |HGNC=11633 | ||
|TSSclassifier=strong | |||
|UniProt=P15923 | |UniProt=P15923 | ||
|association_with_transcript=-227bp_to_NM_003200_5end | |||
|cluster_id=chr19:1652555..1652568,- | |||
|description=CAGE_peak_2_at_TCF3_5end | |||
|id=chr19:1652555..1652568,- | |||
|ontology_enrichment_celltype=CL:0000548!2.40e-18!679;CL:0000004!2.40e-18!679;CL:0000255!2.40e-18!679;CL:0000012!2.40e-18!682;CL:0002321!4.56e-16!248;CL:0000144!1.04e-15!625;CL:0000220!2.48e-15!246;CL:0000003!6.80e-14!722;CL:0000115!3.33e-11!35;CL:0002371!3.50e-11!591;CL:0000213!4.13e-11!57;CL:0000215!4.13e-11!57;CL:0000222!4.63e-11!119;CL:0000071!1.92e-10!18;CL:0002546!1.92e-10!18;CL:0002139!2.44e-10!24;CL:0000066!1.21e-09!254;CL:0002078!2.09e-09!44;CL:0000945!4.30e-09!24;CL:0000826!4.30e-09!24;CL:0000055!1.21e-08!180;CL:0000076!3.48e-08!62 | |||
|ontology_enrichment_celltype_v019=CL:0000071;1.60e-10;18!CL:0002139;2.13e-10;24!CL:0000115;3.61e-10;36!CL:0000945;3.81e-09;24!CL:0000213;3.26e-07;58!CL:0000215;3.26e-07;58!CL:0002078;9.80e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.35e-16,250;CL:0000115,3.85e-12,36;CL:0000213,4.85e-12,58;CL:0000215,4.85e-12,58;CL:0000222,3.20e-11,121;CL:0000071,1.53e-10,18;CL:0002546,1.53e-10,18;CL:0002139,1.95e-10,24;CL:0002078,2.48e-10,45;CL:0000066,9.11e-10,253;CL:0000945,3.54e-09,24;CL:0000826,3.54e-09,24;CL:0000076,8.75e-08,63;CL:0000236,9.15e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002546;1.60e-10;18 | |||
|ontology_enrichment_disease=DOID:2531!3.88e-09!51;DOID:0060083!3.88e-09!51;DOID:162!3.50e-08!235;DOID:14566!1.84e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.50e-09,51;DOID:0060083,2.50e-09,51;DOID:162,7.34e-08,235;DOID:14566,4.65e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001986!1.92e-10!18;UBERON:0004638!1.92e-10!18;UBERON:0004852!1.92e-10!18;UBERON:0004535!3.48e-10!110;UBERON:0002049!1.32e-09!79;UBERON:0007798!1.32e-09!79;UBERON:0000487!1.93e-09!22;UBERON:0001009!2.92e-09!113;UBERON:0000055!9.10e-09!69;UBERON:0006914!3.53e-08!25;UBERON:0001981!6.62e-08!60;UBERON:0007500!6.62e-08!60;UBERON:0004537!6.62e-08!60;UBERON:0006965!6.62e-08!60;UBERON:0004872!8.55e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.60e-10;18!UBERON:0001986;1.60e-10;18!UBERON:0004852;1.60e-10;18!UBERON:0000487;1.98e-09;22!UBERON:0006914;2.68e-08;25!UBERON:0000490;1.14e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.53e-10,18;UBERON:0001986,1.53e-10,18;UBERON:0004852,1.53e-10,18;UBERON:0004535,6.22e-10,109;UBERON:0000487,1.72e-09,22;UBERON:0002049,2.68e-09,78;UBERON:0007798,2.68e-09,78;UBERON:0001009,4.75e-09,112;UBERON:0000055,1.46e-08,68;UBERON:0006914,2.33e-08,25;UBERON:0007500,1.08e-07,59;UBERON:0001981,1.08e-07,59;UBERON:0004537,1.08e-07,59;UBERON:0006965,1.08e-07,59 | |||
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| ||
|short_description=p2@TCF3 | |||
}} | }} |
Latest revision as of 09:59, 16 September 2015
Short description: | p2@TCF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TCF3_5end |
Coexpression cluster: | NA |
Association with transcript: | -227bp_to_NM_003200_5end |
EntrezGene: | TCF3 |
HGNC: | 11633 |
UniProt: | P15923 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.35e-16 | 250 |
endothelial cell | 3.85e-12 | 36 |
lining cell | 4.85e-12 | 58 |
barrier cell | 4.85e-12 | 58 |
mesodermal cell | 3.20e-11 | 121 |
blood vessel endothelial cell | 1.53e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.53e-10 | 18 |
endothelial cell of vascular tree | 1.95e-10 | 24 |
meso-epithelial cell | 2.48e-10 | 45 |
epithelial cell | 9.11e-10 | 253 |
lymphocyte of B lineage | 3.54e-09 | 24 |
pro-B cell | 3.54e-09 | 24 |
squamous epithelial cell | 8.75e-08 | 63 |
B cell | 9.15e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.53e-10 | 18 |
endothelium | 1.53e-10 | 18 |
cardiovascular system endothelium | 1.53e-10 | 18 |
cardiovascular system | 6.22e-10 | 109 |
simple squamous epithelium | 1.72e-09 | 22 |
vasculature | 2.68e-09 | 78 |
vascular system | 2.68e-09 | 78 |
circulatory system | 4.75e-09 | 112 |
vessel | 1.46e-08 | 68 |
squamous epithelium | 2.33e-08 | 25 |
epithelial tube open at both ends | 1.08e-07 | 59 |
blood vessel | 1.08e-07 | 59 |
blood vasculature | 1.08e-07 | 59 |
vascular cord | 1.08e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.50e-09 | 51 |
immune system cancer | 2.50e-09 | 51 |
cancer | 7.34e-08 | 235 |
disease of cellular proliferation | 4.65e-07 | 239 |