FFCP PHASE1:Hg19::chr2:106016186..106016205,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:106016186..106016205,+ | |||
|coexpression_cluster_id=C367 | |coexpression_cluster_id=C367 | ||
|description=CAGE_peak_at_chr2:106016186..106016205,+ | |description=CAGE_peak_at_chr2:106016186..106016205,+ | ||
|id=chr2:106016186..106016205,+ | |id=chr2:106016186..106016205,+ | ||
|ontology_enrichment_celltype=CL:0002178!6.50e-18!3;CL:0002541!1.21e-17!3;CL:0002251!2.88e-09!21;CL:0000223!7.14e-08!59;CL:0002076!2.64e-07!43;CL:1001319!2.99e-07!1;CL:1000600!2.99e-07!1 | |ontology_enrichment_celltype=CL:0002178!6.50e-18!3;CL:0002541!1.21e-17!3;CL:0002251!2.88e-09!21;CL:0000223!7.14e-08!59;CL:0002076!2.64e-07!43;CL:1001319!2.99e-07!1;CL:1000600!2.99e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:1001319;4.59e-23;1!CL:1000600;4.59e-23;1!CL:0002178;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,4.10e-23,1;CL:1000600,4.10e-23,1;CL:0002178,1.51e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008814;3.06e-12;2!UBERON:0010056;3.06e-12;2 | |||
|ontology_enrichment_disease=DOID:299!8.56e-14!25;DOID:305!1.82e-13!106;DOID:0050687!5.32e-13!143;DOID:4929!8.86e-13!2;DOID:170!5.33e-09!6;DOID:1325!1.10e-07!7;DOID:3904!1.10e-07!7;DOID:3111!2.22e-07!1;DOID:3603!2.22e-07!1;DOID:6193!2.36e-07!1;DOID:1799!4.01e-07!1;DOID:10165!4.01e-07!1;DOID:1798!4.01e-07!1;DOID:162!5.89e-07!235;DOID:3119!8.31e-07!14 | |ontology_enrichment_disease=DOID:299!8.56e-14!25;DOID:305!1.82e-13!106;DOID:0050687!5.32e-13!143;DOID:4929!8.86e-13!2;DOID:170!5.33e-09!6;DOID:1325!1.10e-07!7;DOID:3904!1.10e-07!7;DOID:3111!2.22e-07!1;DOID:3603!2.22e-07!1;DOID:6193!2.36e-07!1;DOID:1799!4.01e-07!1;DOID:10165!4.01e-07!1;DOID:1798!4.01e-07!1;DOID:162!5.89e-07!235;DOID:3119!8.31e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:3111;1.34e-23;1!DOID:3603;1.34e-23;1!DOID:6193;2.09e-23;1!DOID:299;3.11e-22;25!DOID:4929;1.48e-12;2!DOID:3350;2.07e-12;2!DOID:0050687;2.12e-07;143!DOID:3119;2.81e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,1.34e-23,1;DOID:3603,1.34e-23,1;DOID:6193,1.67e-23,1;DOID:299,3.25e-22,25;DOID:4929,1.48e-12,2;DOID:3350,1.85e-12,2;DOID:0050687,2.95e-12,143;DOID:305,4.80e-10,106;DOID:162,2.69e-07,235;DOID:3119,2.95e-07,14;DOID:14566,3.89e-07,239 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;1.07e-23;1!UBERON:0003703;1.07e-23;1!UBERON:0001174;1.07e-23;1!UBERON:0004914;1.07e-23;1!UBERON:0004645;4.59e-23;1!UBERON:0001256;4.59e-23;1!UBERON:0001259;4.59e-23;1!UBERON:0001255;3.06e-12;2!UBERON:0001556;3.06e-12;2!UBERON:0000344;1.45e-10;20!UBERON:0002114;8.31e-09;2!UBERON:0001723;1.35e-08;3!UBERON:0001033;1.35e-08;3!UBERON:0002394;6.50e-07;4!UBERON:0003928;6.50e-07;4!UBERON:0003343;9.36e-07;4!UBERON:0004785;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,1.07e-23,1;UBERON:0003703,1.07e-23,1;UBERON:0001174,1.07e-23,1;UBERON:0004914,1.07e-23,1;UBERON:0004645,4.10e-23,1;UBERON:0001256,4.10e-23,1;UBERON:0001259,4.10e-23,1;UBERON:0001255,2.90e-12,2;UBERON:0001556,2.90e-12,2;UBERON:0000344,1.45e-10,20;UBERON:0002114,8.31e-09,2;UBERON:0001723,1.40e-08,3;UBERON:0001033,1.40e-08,3;UBERON:0010056,1.40e-08,3;UBERON:0003343,9.63e-07,4;UBERON:0004785,9.63e-07,4 | |||
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|short_description=p@chr2:106016186..106016205,+ | |short_description=p@chr2:106016186..106016205,+ | ||
}} | }} |
Latest revision as of 23:00, 28 July 2015
Short description: | p@chr2:106016186..106016205, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:106016186..106016205, + |
Coexpression cluster: | C367_papillotubular_Macrophage_clear_pharyngeal_Renal_endometrial_tubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 4.10e-23 | 1 |
lower urinary tract cell | 4.10e-23 | 1 |
epithelial cell of stomach | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 1.07e-23 | 1 |
extrahepatic bile duct | 1.07e-23 | 1 |
common bile duct | 1.07e-23 | 1 |
duodenal papilla | 1.07e-23 | 1 |
urinary bladder urothelium | 4.10e-23 | 1 |
wall of urinary bladder | 4.10e-23 | 1 |
mucosa of urinary bladder | 4.10e-23 | 1 |
urinary bladder | 2.90e-12 | 2 |
lower urinary tract | 2.90e-12 | 2 |
mucosa | 1.45e-10 | 20 |
duodenum | 8.31e-09 | 2 |
tongue | 1.40e-08 | 3 |
gustatory system | 1.40e-08 | 3 |
future tongue | 1.40e-08 | 3 |
mucosa of oral region | 9.63e-07 | 4 |
respiratory system mucosa | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 1.34e-23 | 1 |
mucinous cystadenocarcinoma | 1.34e-23 | 1 |
epithelioid sarcoma | 1.67e-23 | 1 |
adenocarcinoma | 3.25e-22 | 25 |
tubular adenocarcinoma | 1.48e-12 | 2 |
mesenchymal cell neoplasm | 1.85e-12 | 2 |
cell type cancer | 2.95e-12 | 143 |
carcinoma | 4.80e-10 | 106 |
cancer | 2.69e-07 | 235 |
gastrointestinal system cancer | 2.95e-07 | 14 |
disease of cellular proliferation | 3.89e-07 | 239 |