FFCP PHASE1:Hg19::chr19:15923954..15923958,-: Difference between revisions
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|id=chr19:15923954..15923958,-
|short_description=p@chr19:15923954..15923958,-
|description=CAGE_peak_at_chr19:15923954..15923958,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:15923954..15923958,- | |||
|coexpression_cluster_id=C367 | |||
|description=CAGE_peak_at_chr19:15923954..15923958,- | |||
|id=chr19:15923954..15923958,- | |||
|ontology_enrichment_celltype=CL:0000342!2.04e-08!1;CL:0002565!2.04e-08!1;CL:1001319!1.14e-07!1;CL:1000600!1.14e-07!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.33e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:4929;1.55e-98;2!DOID:3119;1.43e-15;14!DOID:299;2.15e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.55e-98,2;DOID:3119,1.43e-15,14;DOID:299,2.15e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0004913!1.65e-08!1;UBERON:0003703!1.65e-08!1;UBERON:0001174!1.65e-08!1;UBERON:0004914!1.65e-08!1;UBERON:0002146!1.77e-08!1;UBERON:0005623!1.77e-08!1;UBERON:0002506!2.04e-08!1;UBERON:0001769!2.04e-08!1;UBERON:0006834!5.05e-08!1;UBERON:0000997!8.69e-08!1;UBERON:0005056!8.69e-08!1;UBERON:0004645!1.14e-07!1;UBERON:0001256!1.14e-07!1;UBERON:0001259!1.14e-07!1;UBERON:0003343!1.75e-07!4;UBERON:0004785!1.75e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;5.42e-195;1!UBERON:0003703;5.42e-195;1!UBERON:0001174;5.42e-195;1!UBERON:0004914;5.42e-195;1!UBERON:0002114;2.39e-66;2!UBERON:0002394;3.10e-50;4!UBERON:0003928;3.10e-50;4!UBERON:0002108;1.48e-40;4!UBERON:0002294;1.78e-29;7!UBERON:0001173;1.78e-29;7!UBERON:0000058;3.81e-21;10!UBERON:0000160;1.85e-12;17!UBERON:0005409;4.42e-10;22!UBERON:0002423;2.15e-09;25!UBERON:0004921;4.53e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,5.42e-195,1;UBERON:0003703,5.42e-195,1;UBERON:0001174,5.42e-195,1;UBERON:0004914,5.42e-195,1;UBERON:0002114,2.39e-66,2;UBERON:0002108,1.48e-40,4;UBERON:0002394,4.27e-34,6;UBERON:0003928,4.27e-34,6;UBERON:0002294,2.62e-23,9;UBERON:0001173,2.62e-23,9;UBERON:0004912,2.62e-23,9;UBERON:0000160,1.85e-12,17;UBERON:0000058,6.95e-12,19;UBERON:0008835,1.80e-10,22;UBERON:0003894,1.80e-10,22;UBERON:0009854,4.42e-10,23;UBERON:0007499,2.15e-09,25;UBERON:0009497,2.15e-09,25;UBERON:0000015,2.15e-09,25;UBERON:0002423,2.15e-09,25;UBERON:0006235,2.15e-09,25;UBERON:0004161,2.15e-09,25;UBERON:0009856,4.34e-09,26;UBERON:0005409,4.34e-09,25 | |||
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|short_description=p@chr19:15923954..15923958,- | |||
}} | }} |
Latest revision as of 04:37, 26 July 2015
Short description: | p@chr19:15923954..15923958, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:15923954..15923958, - |
Coexpression cluster: | C367_papillotubular_Macrophage_clear_pharyngeal_Renal_endometrial_tubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 5.42e-195 | 1 |
extrahepatic bile duct | 5.42e-195 | 1 |
common bile duct | 5.42e-195 | 1 |
duodenal papilla | 5.42e-195 | 1 |
duodenum | 2.39e-66 | 2 |
small intestine | 1.48e-40 | 4 |
bile duct | 4.27e-34 | 6 |
digestive system duct | 4.27e-34 | 6 |
biliary system | 2.62e-23 | 9 |
biliary tree | 2.62e-23 | 9 |
biliary bud | 2.62e-23 | 9 |
intestine | 1.85e-12 | 17 |
duct | 6.95e-12 | 19 |
hepatic diverticulum | 1.80e-10 | 22 |
liver primordium | 1.80e-10 | 22 |
digestive tract diverticulum | 4.42e-10 | 23 |
epithelial sac | 2.15e-09 | 25 |
epithelium of foregut-midgut junction | 2.15e-09 | 25 |
anatomical boundary | 2.15e-09 | 25 |
hepatobiliary system | 2.15e-09 | 25 |
foregut-midgut junction | 2.15e-09 | 25 |
septum transversum | 2.15e-09 | 25 |
sac | 4.34e-09 | 26 |
gastrointestinal system | 4.34e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.55e-98 | 2 |
gastrointestinal system cancer | 1.43e-15 | 14 |
adenocarcinoma | 2.15e-09 | 25 |