FFCP PHASE1:Hg19::chr22:46373004..46373016,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7477 | |EntrezGene=7477 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12787 | |HGNC=12787 | ||
|TSSclassifier=strong | |||
|UniProt=P56706 | |UniProt=P56706 | ||
|association_with_transcript=0bp_to_ENST00000339464,NM_058238,uc003bgo.2_5end | |association_with_transcript=0bp_to_ENST00000339464,NM_058238,uc003bgo.2_5end | ||
|cluster_id=chr22:46373004..46373016,- | |||
|coexpression_cluster_id=C4107 | |coexpression_cluster_id=C4107 | ||
|description=CAGE_peak_3_at_WNT7B_5end | |description=CAGE_peak_3_at_WNT7B_5end | ||
|id=chr22:46373004..46373016,- | |id=chr22:46373004..46373016,- | ||
|ontology_enrichment_celltype=CL:0000066!5.14e-43!254;CL:0002076!1.21e-21!43;CL:0000223!1.18e-16!59;CL:0002368!1.00e-13!13;CL:0002202!4.32e-10!9;CL:0002632!4.32e-10!9;CL:0000082!6.42e-10!19;CL:1000507!6.66e-09!12;CL:1000494!6.66e-09!12;CL:1000497!8.62e-08!18;CL:0002518!8.62e-08!18;CL:0000076!1.00e-07!62;CL:0002251!1.29e-07!21;CL:1000449!1.53e-07!16 | |ontology_enrichment_celltype=CL:0000066!5.14e-43!254;CL:0002076!1.21e-21!43;CL:0000223!1.18e-16!59;CL:0002368!1.00e-13!13;CL:0002202!4.32e-10!9;CL:0002632!4.32e-10!9;CL:0000082!6.42e-10!19;CL:1000507!6.66e-09!12;CL:1000494!6.66e-09!12;CL:1000497!8.62e-08!18;CL:0002518!8.62e-08!18;CL:0000076!1.00e-07!62;CL:0002251!1.29e-07!21;CL:1000449!1.53e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0002076;7.29e-22;42!CL:0002368;1.21e-15;13!CL:0002202;1.40e-11;9!CL:0002632;1.40e-11;9!CL:0002251;1.37e-10;20!CL:0002621;5.55e-08;3!CL:0000307;1.36e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.37e-40,253;CL:0002076,1.73e-30,42;CL:0000223,3.79e-26,58;CL:0002368,2.13e-15,13;CL:0002202,2.24e-11,9;CL:0002632,2.24e-11,9;CL:0002251,1.62e-10,20;CL:0000076,1.20e-09,63;CL:0002621,6.09e-08,3;CL:0000068,1.29e-07,3;CL:0000069,1.29e-07,3;CL:0000307,1.29e-07,3;CL:0000377,1.29e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;4.71e-15;58!CL:0000377;1.36e-07;3 | |||
|ontology_enrichment_disease=DOID:305!4.40e-41!106;DOID:0050687!1.07e-29!143;DOID:162!3.97e-18!235;DOID:14566!3.45e-17!239;DOID:1749!9.91e-15!14;DOID:299!2.27e-13!25 | |ontology_enrichment_disease=DOID:305!4.40e-41!106;DOID:0050687!1.07e-29!143;DOID:162!3.97e-18!235;DOID:14566!3.45e-17!239;DOID:1749!9.91e-15!14;DOID:299!2.27e-13!25 | ||
|ontology_enrichment_disease_v019=DOID:1749;4.57e-23;14!DOID:299;2.22e-11;25!DOID:305;2.46e-09;106!DOID:170;9.11e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.89e-31,106;DOID:1749,2.78e-23,14;DOID:0050687,3.91e-21,143;DOID:162,1.50e-12,235;DOID:14566,5.01e-12,239;DOID:299,2.27e-11,25;DOID:7,1.84e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0001004!8.89e-24!72;UBERON:0000065!1.33e-23!53;UBERON:0004119!3.59e-22!169;UBERON:0000925!3.59e-22!169;UBERON:0006595!3.59e-22!169;UBERON:0008947!7.35e-21!38;UBERON:0003258!7.35e-21!38;UBERON:0000072!1.25e-19!46;UBERON:0001007!4.18e-18!155;UBERON:0001555!4.18e-18!155;UBERON:0007026!4.18e-18!155;UBERON:0000077!1.67e-14!130;UBERON:0001041!1.97e-13!98;UBERON:0004921!2.42e-13!129;UBERON:0004185!2.42e-13!129;UBERON:0005178!3.19e-13!34;UBERON:0002224!3.19e-13!34;UBERON:0005177!1.13e-12!107;UBERON:0005181!1.25e-12!35;UBERON:0000464!2.72e-12!104;UBERON:0001008!8.67e-12!45;UBERON:0005911!1.58e-11!82;UBERON:0006554!3.48e-11!44;UBERON:0000064!6.32e-11!219;UBERON:0002048!1.87e-10!22;UBERON:0000117!1.87e-10!22;UBERON:0000171!1.87e-10!22;UBERON:0000170!1.87e-10!22;UBERON:0005597!1.87e-10!22;UBERON:0000118!1.87e-10!22;UBERON:0009569!1.95e-10!113;UBERON:0004807!6.11e-10!28;UBERON:0004802!6.42e-10!19;UBERON:0000115!6.42e-10!19;UBERON:0000466!6.73e-10!126;UBERON:0000915!6.86e-10!52;UBERON:0005153!6.97e-10!37;UBERON:0001737!1.30e-09!9;UBERON:0009773!6.66e-09!12;UBERON:0001231!6.66e-09!12;UBERON:0004810!6.66e-09!12;UBERON:0001557!7.25e-09!19;UBERON:0000062!9.89e-09!511;UBERON:0003064!9.90e-09!37;UBERON:0000058!1.01e-08!26;UBERON:0007196!1.47e-08!14;UBERON:0001558!1.47e-08!14;UBERON:0000161!1.57e-08!35;UBERON:0005157!1.59e-08!51;UBERON:0000481!2.92e-08!347;UBERON:0003104!3.12e-08!238;UBERON:0009142!3.12e-08!238;UBERON:0000475!1.07e-07!365;UBERON:0000063!1.18e-07!97;UBERON:0004211!1.53e-07!16;UBERON:0001285!1.53e-07!16;UBERON:0007684!1.53e-07!16;UBERON:0003220!1.53e-07!16;UBERON:0004208!1.53e-07!16;UBERON:0003729!2.00e-07!5;UBERON:0000489!2.69e-07!32;UBERON:0002113!3.14e-07!27;UBERON:0003918!3.14e-07!27;UBERON:0005095!3.14e-07!27;UBERON:0007687!3.14e-07!27;UBERON:0006555!6.39e-07!17;UBERON:0005103!6.39e-07!17;UBERON:0000083!6.39e-07!17;UBERON:0009201!6.39e-07!17;UBERON:0004819!6.39e-07!17;UBERON:0006553!6.39e-07!17;UBERON:0003074!6.39e-07!17;UBERON:0003060!6.39e-07!17 | |ontology_enrichment_uberon=UBERON:0001004!8.89e-24!72;UBERON:0000065!1.33e-23!53;UBERON:0004119!3.59e-22!169;UBERON:0000925!3.59e-22!169;UBERON:0006595!3.59e-22!169;UBERON:0008947!7.35e-21!38;UBERON:0003258!7.35e-21!38;UBERON:0000072!1.25e-19!46;UBERON:0001007!4.18e-18!155;UBERON:0001555!4.18e-18!155;UBERON:0007026!4.18e-18!155;UBERON:0000077!1.67e-14!130;UBERON:0001041!1.97e-13!98;UBERON:0004921!2.42e-13!129;UBERON:0004185!2.42e-13!129;UBERON:0005178!3.19e-13!34;UBERON:0002224!3.19e-13!34;UBERON:0005177!1.13e-12!107;UBERON:0005181!1.25e-12!35;UBERON:0000464!2.72e-12!104;UBERON:0001008!8.67e-12!45;UBERON:0005911!1.58e-11!82;UBERON:0006554!3.48e-11!44;UBERON:0000064!6.32e-11!219;UBERON:0002048!1.87e-10!22;UBERON:0000117!1.87e-10!22;UBERON:0000171!1.87e-10!22;UBERON:0000170!1.87e-10!22;UBERON:0005597!1.87e-10!22;UBERON:0000118!1.87e-10!22;UBERON:0009569!1.95e-10!113;UBERON:0004807!6.11e-10!28;UBERON:0004802!6.42e-10!19;UBERON:0000115!6.42e-10!19;UBERON:0000466!6.73e-10!126;UBERON:0000915!6.86e-10!52;UBERON:0005153!6.97e-10!37;UBERON:0001737!1.30e-09!9;UBERON:0009773!6.66e-09!12;UBERON:0001231!6.66e-09!12;UBERON:0004810!6.66e-09!12;UBERON:0001557!7.25e-09!19;UBERON:0000062!9.89e-09!511;UBERON:0003064!9.90e-09!37;UBERON:0000058!1.01e-08!26;UBERON:0007196!1.47e-08!14;UBERON:0001558!1.47e-08!14;UBERON:0000161!1.57e-08!35;UBERON:0005157!1.59e-08!51;UBERON:0000481!2.92e-08!347;UBERON:0003104!3.12e-08!238;UBERON:0009142!3.12e-08!238;UBERON:0000475!1.07e-07!365;UBERON:0000063!1.18e-07!97;UBERON:0004211!1.53e-07!16;UBERON:0001285!1.53e-07!16;UBERON:0007684!1.53e-07!16;UBERON:0003220!1.53e-07!16;UBERON:0004208!1.53e-07!16;UBERON:0003729!2.00e-07!5;UBERON:0000489!2.69e-07!32;UBERON:0002113!3.14e-07!27;UBERON:0003918!3.14e-07!27;UBERON:0005095!3.14e-07!27;UBERON:0007687!3.14e-07!27;UBERON:0006555!6.39e-07!17;UBERON:0005103!6.39e-07!17;UBERON:0000083!6.39e-07!17;UBERON:0009201!6.39e-07!17;UBERON:0004819!6.39e-07!17;UBERON:0006553!6.39e-07!17;UBERON:0003074!6.39e-07!17;UBERON:0003060!6.39e-07!17 | ||
|ontology_enrichment_uberon_v019=UBERON:0003729;4.89e-11;13!UBERON:0003343;1.69e-10;4!UBERON:0004785;1.69e-10;4!UBERON:0000344;2.17e-10;20!UBERON:0000065;3.88e-09;44!UBERON:0000486;7.06e-09;12!UBERON:0000072;1.66e-08;37!UBERON:0001004;2.80e-08;65!UBERON:0001737;3.61e-08;9!UBERON:0001557;3.61e-08;9!UBERON:0001949;5.55e-08;3!UBERON:0000365;8.41e-08;5!UBERON:0006554;1.50e-07;30!UBERON:0001008;1.50e-07;30!UBERON:0004807;5.66e-07;22!UBERON:0000974;5.84e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.25e-14,160;UBERON:0000925,6.25e-14,160;UBERON:0006595,6.25e-14,160;UBERON:0001004,1.08e-13,74;UBERON:0000065,2.90e-11,54;UBERON:0003729,6.02e-11,13;UBERON:0001007,1.17e-10,145;UBERON:0001555,1.17e-10,145;UBERON:0007026,1.17e-10,145;UBERON:0003343,1.89e-10,4;UBERON:0004785,1.89e-10,4;UBERON:0000344,2.15e-10,20;UBERON:0008947,1.69e-09,38;UBERON:0003258,1.69e-09,38;UBERON:0000072,2.08e-09,47;UBERON:0000365,4.04e-08,5;UBERON:0001737,5.31e-08,9;UBERON:0001949,6.09e-08,3;UBERON:0004921,1.57e-07,118;UBERON:0005177,3.28e-07,101;UBERON:0001041,6.26e-07,87;UBERON:0006554,7.94e-07,47;UBERON:0005910,9.47e-07,6 | |||
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| ||
|short_description=p3@WNT7B | |short_description=p3@WNT7B | ||
}} | }} |
Latest revision as of 04:48, 25 September 2015
Short description: | p3@WNT7B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_WNT7B_5end |
Coexpression cluster: | C4107_Renal_pharyngeal_oral_cervical_tubular_keratoacanthoma_bronchial |
Association with transcript: | 0bp_to_ENST00000339464, NM_058238, uc003bgo.2_5end |
EntrezGene: | WNT7B |
HGNC: | 12787 |
UniProt: | P56706 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.37e-40 | 253 |
endo-epithelial cell | 1.73e-30 | 42 |
endodermal cell | 3.79e-26 | 58 |
respiratory epithelial cell | 2.13e-15 | 13 |
epithelial cell of tracheobronchial tree | 2.24e-11 | 9 |
epithelial cell of lower respiratory tract | 2.24e-11 | 9 |
epithelial cell of alimentary canal | 1.62e-10 | 20 |
squamous epithelial cell | 1.20e-09 | 63 |
gingival epithelial cell | 6.09e-08 | 3 |
duct epithelial cell | 1.29e-07 | 3 |
branched duct epithelial cell | 1.29e-07 | 3 |
tracheal epithelial cell | 1.29e-07 | 3 |
tracheoblast | 1.29e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 6.25e-14 | 160 |
endoderm | 6.25e-14 | 160 |
presumptive endoderm | 6.25e-14 | 160 |
respiratory system | 1.08e-13 | 74 |
respiratory tract | 2.90e-11 | 54 |
mouth mucosa | 6.02e-11 | 13 |
digestive system | 1.17e-10 | 145 |
digestive tract | 1.17e-10 | 145 |
primitive gut | 1.17e-10 | 145 |
mucosa of oral region | 1.89e-10 | 4 |
respiratory system mucosa | 1.89e-10 | 4 |
mucosa | 2.15e-10 | 20 |
respiratory primordium | 1.69e-09 | 38 |
endoderm of foregut | 1.69e-09 | 38 |
segment of respiratory tract | 2.08e-09 | 47 |
urothelium | 4.04e-08 | 5 |
larynx | 5.31e-08 | 9 |
gingival epithelium | 6.09e-08 | 3 |
subdivision of digestive tract | 1.57e-07 | 118 |
trunk region element | 3.28e-07 | 101 |
foregut | 6.26e-07 | 87 |
urinary system structure | 7.94e-07 | 47 |
transitional epithelium | 9.47e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.89e-31 | 106 |
squamous cell carcinoma | 2.78e-23 | 14 |
cell type cancer | 3.91e-21 | 143 |
cancer | 1.50e-12 | 235 |
disease of cellular proliferation | 5.01e-12 | 239 |
adenocarcinoma | 2.27e-11 | 25 |
disease of anatomical entity | 1.84e-07 | 39 |