FFCP PHASE1:Hg19::chr22:37420056..37420068,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4357 | |EntrezGene=4357 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7223 | |HGNC=7223 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-164bp_to_uc003aqn.2,uc003aqo.2_5end | |association_with_transcript=-164bp_to_uc003aqn.2,uc003aqo.2_5end | ||
|cluster_id=chr22:37420056..37420068,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_6_at_MPST_5end | |description=CAGE_peak_6_at_MPST_5end | ||
|id=chr22:37420056..37420068,+ | |id=chr22:37420056..37420068,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.64e-17!12;CL:0000417!1.64e-17!12;CL:0000668!1.64e-17!12;CL:0000414!1.64e-17!12;CL:0000412!1.64e-17!12;CL:0000182!1.64e-17!12;CL:0000313!2.52e-07!1 | |ontology_enrichment_celltype=CL:0000181!1.64e-17!12;CL:0000417!1.64e-17!12;CL:0000668!1.64e-17!12;CL:0000414!1.64e-17!12;CL:0000412!1.64e-17!12;CL:0000182!1.64e-17!12;CL:0000313!2.52e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000313;4.22e-11;1!CL:0000182;2.51e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,4.01e-11,1;CL:0000182,2.54e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0001045;4.22e-11;1 | |||
|ontology_enrichment_disease=DOID:3493!6.32e-13!2;DOID:299!5.46e-08!25;DOID:2152!2.52e-07!1;DOID:12603!4.89e-07!1 | |ontology_enrichment_disease=DOID:3493!6.32e-13!2;DOID:299!5.46e-08!25;DOID:2152!2.52e-07!1;DOID:12603!4.89e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:2152;4.22e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,4.01e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0009854!2.06e-24!23;UBERON:0009497!2.88e-22!25;UBERON:0000015!2.88e-22!25;UBERON:0002423!2.88e-22!25;UBERON:0006235!2.88e-22!25;UBERON:0004161!2.88e-22!25;UBERON:0009856!2.17e-21!26;UBERON:0005057!3.77e-21!26;UBERON:0008835!9.53e-21!22;UBERON:0003894!9.53e-21!22;UBERON:0002107!2.78e-19!19;UBERON:0006925!2.78e-19!19;UBERON:0008836!2.78e-19!19;UBERON:0007499!4.45e-18!25;UBERON:0005409!6.03e-18!35;UBERON:0000160!7.87e-16!27;UBERON:0004921!3.94e-14!129;UBERON:0004185!3.94e-14!129;UBERON:0000059!1.79e-13!11;UBERON:0005172!2.46e-13!55;UBERON:0005173!2.46e-13!55;UBERON:0001007!1.97e-12!155;UBERON:0001555!1.97e-12!155;UBERON:0007026!1.97e-12!155;UBERON:0002368!2.04e-12!35;UBERON:0002417!8.53e-12!61;UBERON:0000916!8.53e-12!61;UBERON:0002365!2.36e-11!31;UBERON:0002330!2.36e-11!31;UBERON:0003929!2.68e-11!54;UBERON:0004119!4.78e-11!169;UBERON:0000925!4.78e-11!169;UBERON:0006595!4.78e-11!169;UBERON:0001155!6.37e-11!9;UBERON:0000949!2.51e-09!45;UBERON:0004911!2.52e-07!1;UBERON:0001154!2.67e-07!1;UBERON:0001153!2.67e-07!1;UBERON:0000077!3.42e-07!130;UBERON:0004913!3.85e-07!1;UBERON:0003703!3.85e-07!1;UBERON:0001174!3.85e-07!1;UBERON:0004914!3.85e-07!1;UBERON:0002530!9.07e-07!59;UBERON:0005911!9.26e-07!82 | |ontology_enrichment_uberon=UBERON:0009854!2.06e-24!23;UBERON:0009497!2.88e-22!25;UBERON:0000015!2.88e-22!25;UBERON:0002423!2.88e-22!25;UBERON:0006235!2.88e-22!25;UBERON:0004161!2.88e-22!25;UBERON:0009856!2.17e-21!26;UBERON:0005057!3.77e-21!26;UBERON:0008835!9.53e-21!22;UBERON:0003894!9.53e-21!22;UBERON:0002107!2.78e-19!19;UBERON:0006925!2.78e-19!19;UBERON:0008836!2.78e-19!19;UBERON:0007499!4.45e-18!25;UBERON:0005409!6.03e-18!35;UBERON:0000160!7.87e-16!27;UBERON:0004921!3.94e-14!129;UBERON:0004185!3.94e-14!129;UBERON:0000059!1.79e-13!11;UBERON:0005172!2.46e-13!55;UBERON:0005173!2.46e-13!55;UBERON:0001007!1.97e-12!155;UBERON:0001555!1.97e-12!155;UBERON:0007026!1.97e-12!155;UBERON:0002368!2.04e-12!35;UBERON:0002417!8.53e-12!61;UBERON:0000916!8.53e-12!61;UBERON:0002365!2.36e-11!31;UBERON:0002330!2.36e-11!31;UBERON:0003929!2.68e-11!54;UBERON:0004119!4.78e-11!169;UBERON:0000925!4.78e-11!169;UBERON:0006595!4.78e-11!169;UBERON:0001155!6.37e-11!9;UBERON:0000949!2.51e-09!45;UBERON:0004911!2.52e-07!1;UBERON:0001154!2.67e-07!1;UBERON:0001153!2.67e-07!1;UBERON:0000077!3.42e-07!130;UBERON:0004913!3.85e-07!1;UBERON:0003703!3.85e-07!1;UBERON:0001174!3.85e-07!1;UBERON:0004914!3.85e-07!1;UBERON:0002530!9.07e-07!59;UBERON:0005911!9.26e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.32e-26;22!UBERON:0000160;5.42e-26;17!UBERON:0002108;2.85e-18;4!UBERON:0001155;1.03e-17;9!UBERON:0004921;5.65e-16;33!UBERON:0000059;1.52e-14;11!UBERON:0002107;1.72e-13;19!UBERON:0006925;1.72e-13;19!UBERON:0001154;4.22e-11;1!UBERON:0001153;4.22e-11;1!UBERON:0004911;4.22e-11;1!UBERON:0009854;4.22e-11;1!UBERON:0002423;3.19e-10;25!UBERON:0001007;1.35e-09;81!UBERON:0002365;3.27e-08;31!UBERON:0002330;3.27e-08;31!UBERON:0002368;3.72e-07;33!UBERON:0005172;7.12e-07;52!UBERON:0005173;7.12e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.31e-26,17;UBERON:0005409,2.58e-23,25;UBERON:0002108,2.11e-18,4;UBERON:0001155,9.87e-18,9;UBERON:0009854,1.36e-15,23;UBERON:0000059,1.47e-14,11;UBERON:0009856,9.49e-14,26;UBERON:0002107,1.72e-13,19;UBERON:0006925,1.72e-13,19;UBERON:0008836,1.72e-13,19;UBERON:0004921,3.11e-12,118;UBERON:0008835,1.23e-11,22;UBERON:0003894,1.23e-11,22;UBERON:0004911,4.01e-11,1;UBERON:0001154,4.44e-11,1;UBERON:0001153,4.44e-11,1;UBERON:0001045,4.44e-11,1;UBERON:0007499,3.19e-10,25;UBERON:0009497,3.19e-10,25;UBERON:0000015,3.19e-10,25;UBERON:0002423,3.19e-10,25;UBERON:0006235,3.19e-10,25;UBERON:0004161,3.19e-10,25;UBERON:0001007,1.36e-09,145;UBERON:0001555,1.36e-09,145;UBERON:0007026,1.36e-09,145;UBERON:0005172,1.53e-08,54;UBERON:0005173,1.53e-08,54;UBERON:0004119,1.66e-08,160;UBERON:0000925,1.66e-08,160;UBERON:0006595,1.66e-08,160;UBERON:0002365,3.27e-08,31;UBERON:0002330,3.27e-08,31;UBERON:0002417,1.29e-07,60;UBERON:0000916,1.29e-07,60;UBERON:0002368,2.98e-07,35 | |||
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|short_description=p6@MPST | |short_description=p6@MPST | ||
}} | }} |
Latest revision as of 03:47, 20 September 2015
Short description: | p6@MPST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MPST_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -164bp_to_uc003aqn.2, uc003aqo.2_5end |
EntrezGene: | MPST |
HGNC: | 7223 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 4.01e-11 | 1 |
hepatocyte | 2.54e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.31e-26 | 17 |
gastrointestinal system | 2.58e-23 | 25 |
small intestine | 2.11e-18 | 4 |
colon | 9.87e-18 | 9 |
digestive tract diverticulum | 1.36e-15 | 23 |
large intestine | 1.47e-14 | 11 |
sac | 9.49e-14 | 26 |
liver | 1.72e-13 | 19 |
digestive gland | 1.72e-13 | 19 |
liver bud | 1.72e-13 | 19 |
subdivision of digestive tract | 3.11e-12 | 118 |
hepatic diverticulum | 1.23e-11 | 22 |
liver primordium | 1.23e-11 | 22 |
epithelium of female gonad | 4.01e-11 | 1 |
vermiform appendix | 4.44e-11 | 1 |
caecum | 4.44e-11 | 1 |
midgut | 4.44e-11 | 1 |
epithelial sac | 3.19e-10 | 25 |
epithelium of foregut-midgut junction | 3.19e-10 | 25 |
anatomical boundary | 3.19e-10 | 25 |
hepatobiliary system | 3.19e-10 | 25 |
foregut-midgut junction | 3.19e-10 | 25 |
septum transversum | 3.19e-10 | 25 |
digestive system | 1.36e-09 | 145 |
digestive tract | 1.36e-09 | 145 |
primitive gut | 1.36e-09 | 145 |
abdomen element | 1.53e-08 | 54 |
abdominal segment element | 1.53e-08 | 54 |
endoderm-derived structure | 1.66e-08 | 160 |
endoderm | 1.66e-08 | 160 |
presumptive endoderm | 1.66e-08 | 160 |
exocrine gland | 3.27e-08 | 31 |
exocrine system | 3.27e-08 | 31 |
abdominal segment of trunk | 1.29e-07 | 60 |
abdomen | 1.29e-07 | 60 |
endocrine gland | 2.98e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 4.01e-11 | 1 |