FFCP PHASE1:Hg19::chr21:40361134..40361189,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:40361134..40361189,- | |||
|coexpression_cluster_id=C400 | |coexpression_cluster_id=C400 | ||
|description=CAGE_peak_at_chr21:40361134..40361189,- | |description=CAGE_peak_at_chr21:40361134..40361189,- | ||
|id=chr21:40361134..40361189,- | |id=chr21:40361134..40361189,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002127;3.85e-12;1!CL:0000911;3.85e-12;1!CL:0000814;3.85e-12;1!CL:0000817;5.62e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,4.06e-12,1;CL:0000914,4.06e-12,1;CL:0000911,4.06e-12,1;CL:0000814,4.06e-12,1;CL:0002042,4.06e-12,1;CL:0002039,4.06e-12,1;CL:0002040,4.06e-12,1;CL:0002041,4.06e-12,1 | |||
|ontology_enrichment_development_v019=UBERON:0008801;8.19e-12;1 | |||
|ontology_enrichment_disease=DOID:1240!1.65e-11!39;DOID:2531!5.38e-08!51;DOID:0060083!5.38e-08!51;DOID:8692!1.74e-07!31 | |ontology_enrichment_disease=DOID:1240!1.65e-11!39;DOID:2531!5.38e-08!51;DOID:0060083!5.38e-08!51;DOID:8692!1.74e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;4.92e-19;39!DOID:2531;1.32e-14;51!DOID:0060083;1.32e-14;51!DOID:9119;2.93e-12;1!DOID:8692;3.59e-12;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,4.30e-21,39;DOID:2531,7.27e-16,51;DOID:0060083,7.27e-16,51;DOID:9119,2.93e-12,1;DOID:8692,4.01e-12,31;DOID:0050686,9.70e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0002370!2.18e-07!4;UBERON:0005058!2.18e-07!4;UBERON:0009113!2.18e-07!4;UBERON:0003295!2.18e-07!4;UBERON:0005562!2.18e-07!4;UBERON:0004177!9.32e-07!7 | |ontology_enrichment_uberon=UBERON:0002370!2.18e-07!4;UBERON:0005058!2.18e-07!4;UBERON:0009113!2.18e-07!4;UBERON:0003295!2.18e-07!4;UBERON:0005562!2.18e-07!4;UBERON:0004177!9.32e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001831;8.19e-12;1!UBERON:0001567;8.19e-12;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,8.64e-12,1;UBERON:0001567,8.64e-12,1;UBERON:0008801,8.64e-12,1;UBERON:0002370,1.82e-11,4;UBERON:0005058,1.82e-11,4;UBERON:0009113,1.82e-11,4;UBERON:0003295,1.82e-11,4;UBERON:0005562,1.82e-11,4;UBERON:0003408,5.12e-10,10;UBERON:0003351,6.16e-08,6;UBERON:0004177,6.39e-07,7;UBERON:0005057,6.39e-07,7 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0.164201178899891,0,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,1.12101712596307,1.58030450865046,0,0,0,0,0,0,0,0.445641827540694,0,0,0,0.384273959177026,0.780356085359269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.1596700302006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.3221900480085,20.4888508843433,0,65.6616132013967,0.191505370132367,31.9627109913063,0,369.248289219198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,103.585382047322,4.22961015263549,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0.274792780205587,0,0,22.9191174336736,0,0.225595660617181,0,0,0,0.476809736941136,0,0,0,1.94749775767882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81538247097931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0.107824811396682,0,0,0.169732529954025,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,2.19303106742873,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66855397145913,0,0,0.513314034281235,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,1.10440093535229,0.0679914901909147,0,0.5290268405154,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0.476128862927481,0.968833647540092,1.36564371450887,0,0,0,0,0,0,0.215166616178029,1.33064142618405,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr21:40361134..40361189,- | |short_description=p@chr21:40361134..40361189,- | ||
}} | }} |
Latest revision as of 17:55, 28 July 2015
Short description: | p@chr21:40361134..40361189, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:40361134..40361189, - |
Coexpression cluster: | C400_acute_leukemia_chronic_myelodysplastic_NK_pancreas_duodenum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 4.06e-12 | 1 |
immature NK T cell | 4.06e-12 | 1 |
effector T cell | 4.06e-12 | 1 |
mature NK T cell | 4.06e-12 | 1 |
immature NK T cell stage IV | 4.06e-12 | 1 |
immature NK T cell stage I | 4.06e-12 | 1 |
immature NK T cell stage II | 4.06e-12 | 1 |
immature NK T cell stage III | 4.06e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 8.64e-12 | 1 |
cheek | 8.64e-12 | 1 |
parotid gland primordium | 8.64e-12 | 1 |
thymus | 1.82e-11 | 4 |
hemolymphoid system gland | 1.82e-11 | 4 |
thymic region | 1.82e-11 | 4 |
pharyngeal gland | 1.82e-11 | 4 |
thymus primordium | 1.82e-11 | 4 |
gland of gut | 5.12e-10 | 10 |
pharyngeal epithelium | 6.16e-08 | 6 |
hemopoietic organ | 6.39e-07 | 7 |
immune organ | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
leukemia | 4.30e-21 | 39 |
hematologic cancer | 7.27e-16 | 51 |
immune system cancer | 7.27e-16 | 51 |
acute myeloid leukemia | 2.93e-12 | 1 |
myeloid leukemia | 4.01e-12 | 31 |
organ system cancer | 9.70e-08 | 137 |