FFCP PHASE1:Hg19::chr20:36793663..36793735,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7052 | |EntrezGene=7052 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11778 | |HGNC=11778 | ||
|TSSclassifier=strong | |||
|UniProt=B4DIT7,F5H6P0,P21980 | |UniProt=B4DIT7,F5H6P0,P21980 | ||
|association_with_transcript=0bp_to_ENST00000468262,ENST00000485572,ENST00000536701,ENST00000536724,NM_004613,NM_198951,uc002xhr.2,uc002xhs.1,uc002xht.2,uc002xhu.3,uc010zvx.1,uc010zvy.1_5end | |association_with_transcript=0bp_to_ENST00000468262,ENST00000485572,ENST00000536701,ENST00000536724,NM_004613,NM_198951,uc002xhr.2,uc002xhs.1,uc002xht.2,uc002xhu.3,uc010zvx.1,uc010zvy.1_5end | ||
|cluster_id=chr20:36793663..36793735,- | |||
|coexpression_cluster_id=C454 | |coexpression_cluster_id=C454 | ||
|description=CAGE_peak_1_at_TGM2_5end | |description=CAGE_peak_1_at_TGM2_5end | ||
|id=chr20:36793663..36793735,- | |id=chr20:36793663..36793735,- | ||
|ontology_enrichment_celltype=CL:0000222!1.53e-19!119;CL:0000192!7.84e-16!42;CL:0000514!7.84e-16!42;CL:0000115!1.36e-13!35;CL:0000359!6.73e-13!32;CL:0002139!9.37e-13!24;CL:0000183!1.74e-12!59;CL:0002078!2.22e-12!44;CL:0000187!2.45e-11!54;CL:0000680!4.20e-11!57;CL:0000056!4.20e-11!57;CL:0000355!4.20e-11!57;CL:0000071!4.25e-10!18;CL:0002546!4.25e-10!18;CL:0000220!8.68e-09!246;CL:0000213!8.98e-09!57;CL:0000215!8.98e-09!57;CL:0002321!2.81e-08!248;CL:0000393!3.69e-08!60;CL:0000211!3.69e-08!60;CL:1000497!4.76e-08!18;CL:0002518!4.76e-08!18;CL:1000449!6.84e-08!16;CL:0002681!4.65e-07!13;CL:0002584!4.65e-07!13 | |ontology_enrichment_celltype=CL:0000222!1.53e-19!119;CL:0000192!7.84e-16!42;CL:0000514!7.84e-16!42;CL:0000115!1.36e-13!35;CL:0000359!6.73e-13!32;CL:0002139!9.37e-13!24;CL:0000183!1.74e-12!59;CL:0002078!2.22e-12!44;CL:0000187!2.45e-11!54;CL:0000680!4.20e-11!57;CL:0000056!4.20e-11!57;CL:0000355!4.20e-11!57;CL:0000071!4.25e-10!18;CL:0002546!4.25e-10!18;CL:0000220!8.68e-09!246;CL:0000213!8.98e-09!57;CL:0000215!8.98e-09!57;CL:0002321!2.81e-08!248;CL:0000393!3.69e-08!60;CL:0000211!3.69e-08!60;CL:1000497!4.76e-08!18;CL:0002518!4.76e-08!18;CL:1000449!6.84e-08!16;CL:0002681!4.65e-07!13;CL:0002584!4.65e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002139;8.20e-13;24!CL:0000359;3.57e-12;32!CL:0000192;6.38e-12;43!CL:0000115;6.73e-12;36!CL:0000071;3.84e-10;18!CL:0000349;7.68e-09;19!CL:0002078;1.85e-08;45!CL:1000497;7.09e-08;17!CL:0002518;7.09e-08;17!CL:1000449;1.00e-07;15!CL:0002681;6.72e-07;12!CL:0002584;6.72e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.95e-20,121;CL:0000192,3.95e-16,43;CL:0000514,3.95e-16,43;CL:0000115,3.70e-14,36;CL:0000359,5.90e-13,32;CL:0002078,7.45e-13,45;CL:0002139,8.22e-13,24;CL:0000187,1.27e-11,55;CL:0000680,2.20e-11,58;CL:0000056,2.20e-11,58;CL:0000355,2.20e-11,58;CL:0000071,3.85e-10,18;CL:0002546,3.85e-10,18;CL:0000213,3.93e-09,58;CL:0000215,3.93e-09,58;CL:0000349,7.74e-09,19;CL:0002321,1.99e-08,250;CL:0000393,3.89e-08,61;CL:0000211,3.89e-08,61;CL:1000497,7.12e-08,17;CL:0002518,7.12e-08,17;CL:1000449,1.00e-07,15;CL:0002681,6.73e-07,12;CL:0002584,6.73e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;6.38e-12;43!CL:0002546;3.84e-10;18!CL:0000222;9.61e-07;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!6.85e-36!118;UBERON:0002049!2.25e-31!79;UBERON:0007798!2.25e-31!79;UBERON:0000477!3.97e-28!286;UBERON:0000055!4.22e-27!69;UBERON:0000119!1.95e-26!312;UBERON:0004872!4.51e-26!84;UBERON:0000468!6.75e-26!659;UBERON:0004111!8.95e-26!241;UBERON:0000483!1.60e-25!309;UBERON:0001009!4.82e-25!113;UBERON:0001981!1.57e-24!60;UBERON:0007500!1.57e-24!60;UBERON:0004537!1.57e-24!60;UBERON:0006965!1.57e-24!60;UBERON:0004535!1.28e-23!110;UBERON:0000490!1.78e-23!138;UBERON:0000467!2.87e-23!625;UBERON:0000480!8.02e-23!626;UBERON:0000025!2.30e-22!194;UBERON:0005256!2.34e-22!143;UBERON:0000481!1.17e-21!347;UBERON:0002100!2.07e-20!216;UBERON:0002050!5.97e-18!605;UBERON:0005423!5.97e-18!605;UBERON:0000923!1.22e-17!604;UBERON:0005291!1.22e-17!604;UBERON:0006598!1.22e-17!604;UBERON:0002532!1.22e-17!604;UBERON:0003104!1.79e-17!238;UBERON:0009142!1.79e-17!238;UBERON:0000926!2.74e-17!448;UBERON:0004120!2.74e-17!448;UBERON:0006603!2.74e-17!448;UBERON:0001637!6.32e-17!42;UBERON:0003509!6.32e-17!42;UBERON:0004572!6.32e-17!42;UBERON:0000922!7.03e-17!612;UBERON:0000475!7.50e-14!365;UBERON:0004573!1.24e-13!33;UBERON:0004571!1.24e-13!33;UBERON:0002385!4.36e-11!63;UBERON:0001015!4.36e-11!63;UBERON:0000383!4.36e-11!63;UBERON:0000914!7.43e-11!83;UBERON:0002329!7.43e-11!83;UBERON:0003077!7.43e-11!83;UBERON:0003059!7.43e-11!83;UBERON:0007282!7.43e-11!83;UBERON:0009618!7.43e-11!83;UBERON:0007285!7.43e-11!83;UBERON:0000486!8.76e-11!82;UBERON:0001134!8.83e-11!61;UBERON:0002036!8.83e-11!61;UBERON:0003082!8.83e-11!61;UBERON:0000487!3.22e-10!22;UBERON:0001986!4.25e-10!18;UBERON:0004638!4.25e-10!18;UBERON:0004852!4.25e-10!18;UBERON:0004290!5.44e-10!70;UBERON:0003103!6.32e-10!69;UBERON:0003081!9.48e-10!216;UBERON:0000947!4.06e-09!21;UBERON:0010191!4.06e-09!21;UBERON:0000062!5.00e-09!511;UBERON:0001008!8.47e-09!45;UBERON:0005631!9.35e-09!14;UBERON:0000158!9.35e-09!14;UBERON:0000479!1.02e-08!787;UBERON:0003064!1.22e-08!37;UBERON:0006554!1.26e-08!44;UBERON:0006914!1.48e-08!25;UBERON:0009569!1.80e-08!113;UBERON:0000064!1.82e-08!219;UBERON:0000058!1.93e-08!26;UBERON:0000353!2.75e-08!17;UBERON:0006555!5.13e-08!17;UBERON:0005103!5.13e-08!17;UBERON:0000083!5.13e-08!17;UBERON:0009201!5.13e-08!17;UBERON:0004819!5.13e-08!17;UBERON:0006553!5.13e-08!17;UBERON:0003074!5.13e-08!17;UBERON:0003060!5.13e-08!17;UBERON:0001048!5.93e-08!168;UBERON:0004211!6.84e-08!16;UBERON:0001285!6.84e-08!16;UBERON:0007684!6.84e-08!16;UBERON:0003220!6.84e-08!16;UBERON:0004208!6.84e-08!16;UBERON:0004119!8.34e-08!169;UBERON:0000925!8.34e-08!169;UBERON:0006595!8.34e-08!169;UBERON:0000466!1.09e-07!126;UBERON:0002417!1.13e-07!61;UBERON:0000916!1.13e-07!61;UBERON:0000080!1.22e-07!18;UBERON:0002120!1.22e-07!18;UBERON:0004875!1.22e-07!18;UBERON:0005721!1.22e-07!18;UBERON:0005754!1.22e-07!18;UBERON:0007297!1.22e-07!18;UBERON:0005177!3.27e-07!107;UBERON:0004876!3.82e-07!20;UBERON:0001225!4.65e-07!13;UBERON:0008987!4.65e-07!13;UBERON:0005172!5.11e-07!55;UBERON:0005173!5.11e-07!55;UBERON:0000478!5.34e-07!24;UBERON:0001135!9.38e-07!15 | |ontology_enrichment_uberon=UBERON:0003914!6.85e-36!118;UBERON:0002049!2.25e-31!79;UBERON:0007798!2.25e-31!79;UBERON:0000477!3.97e-28!286;UBERON:0000055!4.22e-27!69;UBERON:0000119!1.95e-26!312;UBERON:0004872!4.51e-26!84;UBERON:0000468!6.75e-26!659;UBERON:0004111!8.95e-26!241;UBERON:0000483!1.60e-25!309;UBERON:0001009!4.82e-25!113;UBERON:0001981!1.57e-24!60;UBERON:0007500!1.57e-24!60;UBERON:0004537!1.57e-24!60;UBERON:0006965!1.57e-24!60;UBERON:0004535!1.28e-23!110;UBERON:0000490!1.78e-23!138;UBERON:0000467!2.87e-23!625;UBERON:0000480!8.02e-23!626;UBERON:0000025!2.30e-22!194;UBERON:0005256!2.34e-22!143;UBERON:0000481!1.17e-21!347;UBERON:0002100!2.07e-20!216;UBERON:0002050!5.97e-18!605;UBERON:0005423!5.97e-18!605;UBERON:0000923!1.22e-17!604;UBERON:0005291!1.22e-17!604;UBERON:0006598!1.22e-17!604;UBERON:0002532!1.22e-17!604;UBERON:0003104!1.79e-17!238;UBERON:0009142!1.79e-17!238;UBERON:0000926!2.74e-17!448;UBERON:0004120!2.74e-17!448;UBERON:0006603!2.74e-17!448;UBERON:0001637!6.32e-17!42;UBERON:0003509!6.32e-17!42;UBERON:0004572!6.32e-17!42;UBERON:0000922!7.03e-17!612;UBERON:0000475!7.50e-14!365;UBERON:0004573!1.24e-13!33;UBERON:0004571!1.24e-13!33;UBERON:0002385!4.36e-11!63;UBERON:0001015!4.36e-11!63;UBERON:0000383!4.36e-11!63;UBERON:0000914!7.43e-11!83;UBERON:0002329!7.43e-11!83;UBERON:0003077!7.43e-11!83;UBERON:0003059!7.43e-11!83;UBERON:0007282!7.43e-11!83;UBERON:0009618!7.43e-11!83;UBERON:0007285!7.43e-11!83;UBERON:0000486!8.76e-11!82;UBERON:0001134!8.83e-11!61;UBERON:0002036!8.83e-11!61;UBERON:0003082!8.83e-11!61;UBERON:0000487!3.22e-10!22;UBERON:0001986!4.25e-10!18;UBERON:0004638!4.25e-10!18;UBERON:0004852!4.25e-10!18;UBERON:0004290!5.44e-10!70;UBERON:0003103!6.32e-10!69;UBERON:0003081!9.48e-10!216;UBERON:0000947!4.06e-09!21;UBERON:0010191!4.06e-09!21;UBERON:0000062!5.00e-09!511;UBERON:0001008!8.47e-09!45;UBERON:0005631!9.35e-09!14;UBERON:0000158!9.35e-09!14;UBERON:0000479!1.02e-08!787;UBERON:0003064!1.22e-08!37;UBERON:0006554!1.26e-08!44;UBERON:0006914!1.48e-08!25;UBERON:0009569!1.80e-08!113;UBERON:0000064!1.82e-08!219;UBERON:0000058!1.93e-08!26;UBERON:0000353!2.75e-08!17;UBERON:0006555!5.13e-08!17;UBERON:0005103!5.13e-08!17;UBERON:0000083!5.13e-08!17;UBERON:0009201!5.13e-08!17;UBERON:0004819!5.13e-08!17;UBERON:0006553!5.13e-08!17;UBERON:0003074!5.13e-08!17;UBERON:0003060!5.13e-08!17;UBERON:0001048!5.93e-08!168;UBERON:0004211!6.84e-08!16;UBERON:0001285!6.84e-08!16;UBERON:0007684!6.84e-08!16;UBERON:0003220!6.84e-08!16;UBERON:0004208!6.84e-08!16;UBERON:0004119!8.34e-08!169;UBERON:0000925!8.34e-08!169;UBERON:0006595!8.34e-08!169;UBERON:0000466!1.09e-07!126;UBERON:0002417!1.13e-07!61;UBERON:0000916!1.13e-07!61;UBERON:0000080!1.22e-07!18;UBERON:0002120!1.22e-07!18;UBERON:0004875!1.22e-07!18;UBERON:0005721!1.22e-07!18;UBERON:0005754!1.22e-07!18;UBERON:0007297!1.22e-07!18;UBERON:0005177!3.27e-07!107;UBERON:0004876!3.82e-07!20;UBERON:0001225!4.65e-07!13;UBERON:0008987!4.65e-07!13;UBERON:0005172!5.11e-07!55;UBERON:0005173!5.11e-07!55;UBERON:0000478!5.34e-07!24;UBERON:0001135!9.38e-07!15 | ||
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| ||
|short_description=p1@TGM2 | |short_description=p1@TGM2 | ||
}} | }} |
Latest revision as of 03:14, 16 September 2015
Short description: | p1@TGM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TGM2_5end |
Coexpression cluster: | C454_Placental_Amniotic_Smooth_Mesenchymal_Lens_Renal_bile |
Association with transcript: | 0bp_to_ENST00000468262, ENST00000485572, ENST00000536701, ENST00000536724, NM_004613, NM_198951, uc002xhr.2, uc002xhs.1, uc002xht.2, uc002xhu.3, uc010zvx.1, uc010zvy.1_5end |
EntrezGene: | TGM2 |
HGNC: | 11778 |
UniProt: | B4DIT7F5H6P0P21980 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.95e-20 | 121 |
smooth muscle cell | 3.95e-16 | 43 |
smooth muscle myoblast | 3.95e-16 | 43 |
endothelial cell | 3.70e-14 | 36 |
vascular associated smooth muscle cell | 5.90e-13 | 32 |
meso-epithelial cell | 7.45e-13 | 45 |
endothelial cell of vascular tree | 8.22e-13 | 24 |
muscle cell | 1.27e-11 | 55 |
muscle precursor cell | 2.20e-11 | 58 |
myoblast | 2.20e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.20e-11 | 58 |
blood vessel endothelial cell | 3.85e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.85e-10 | 18 |
lining cell | 3.93e-09 | 58 |
barrier cell | 3.93e-09 | 58 |
extraembryonic cell | 7.74e-09 | 19 |
embryonic cell | 1.99e-08 | 250 |
electrically responsive cell | 3.89e-08 | 61 |
electrically active cell | 3.89e-08 | 61 |
kidney cell | 7.12e-08 | 17 |
kidney epithelial cell | 7.12e-08 | 17 |
epithelial cell of nephron | 1.00e-07 | 15 |
kidney cortical cell | 6.73e-07 | 12 |
renal cortical epithelial cell | 6.73e-07 | 12 |