FFCP PHASE1:Hg19::chr1:158323920..158323926,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=913 | |EntrezGene=913 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1638 | |HGNC=1638 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-43bp_to_ENST00000464822_5end | |association_with_transcript=-43bp_to_ENST00000464822_5end | ||
|cluster_id=chr1:158323920..158323926,+ | |||
|coexpression_cluster_id=C419 | |coexpression_cluster_id=C419 | ||
|description=CAGE_peak_23_at_CD1E_5end | |description=CAGE_peak_23_at_CD1E_5end | ||
|id=chr1:158323920..158323926,+ | |id=chr1:158323920..158323926,+ | ||
|ontology_enrichment_celltype=CL:0000084!5.49e-09!25;CL:0000827!5.49e-09!25 | |ontology_enrichment_celltype=CL:0000084!5.49e-09!25;CL:0000827!5.49e-09!25 | ||
|ontology_enrichment_celltype_v019=CL:0000084;5.27e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,5.49e-09,25;CL:0000827,5.49e-09,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.49e-07!8 | |ontology_enrichment_disease=DOID:1036!1.49e-07!8 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.49e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.49e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0002370!5.14e-50!4;UBERON:0005058!5.14e-50!4;UBERON:0009113!5.14e-50!4;UBERON:0003295!5.14e-50!4;UBERON:0005562!5.14e-50!4;UBERON:0003351!8.35e-34!6;UBERON:0004177!3.65e-29!7;UBERON:0000974!8.54e-21!10;UBERON:0003408!8.54e-21!10;UBERON:0001042!8.54e-21!10;UBERON:0009145!8.54e-21!10;UBERON:0006562!5.14e-19!11;UBERON:0009722!5.14e-19!11;UBERON:0007690!5.14e-19!11;UBERON:0008814!2.94e-14!15;UBERON:0001557!1.72e-11!19;UBERON:0005057!1.11e-08!26;UBERON:0004807!3.92e-08!28 | |ontology_enrichment_uberon=UBERON:0002370!5.14e-50!4;UBERON:0005058!5.14e-50!4;UBERON:0009113!5.14e-50!4;UBERON:0003295!5.14e-50!4;UBERON:0005562!5.14e-50!4;UBERON:0003351!8.35e-34!6;UBERON:0004177!3.65e-29!7;UBERON:0000974!8.54e-21!10;UBERON:0003408!8.54e-21!10;UBERON:0001042!8.54e-21!10;UBERON:0009145!8.54e-21!10;UBERON:0006562!5.14e-19!11;UBERON:0009722!5.14e-19!11;UBERON:0007690!5.14e-19!11;UBERON:0008814!2.94e-14!15;UBERON:0001557!1.72e-11!19;UBERON:0005057!1.11e-08!26;UBERON:0004807!3.92e-08!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.56e-98;2!UBERON:0005058;2.56e-98;2!UBERON:0009113;2.56e-98;2!UBERON:0004177;3.31e-40;5!UBERON:0005057;3.31e-40;5!UBERON:0000077;2.22e-08;27!UBERON:0002405;2.22e-08;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.14e-50,4;UBERON:0005058,5.14e-50,4;UBERON:0009113,5.14e-50,4;UBERON:0003295,5.14e-50,4;UBERON:0005562,5.14e-50,4;UBERON:0003351,8.35e-34,6;UBERON:0004177,3.65e-29,7;UBERON:0005057,3.65e-29,7;UBERON:0000974,8.54e-21,10;UBERON:0003408,8.54e-21,10;UBERON:0001042,8.54e-21,10;UBERON:0009145,8.54e-21,10;UBERON:0006562,5.14e-19,11;UBERON:0009722,5.14e-19,11;UBERON:0007690,5.14e-19,11;UBERON:0008814,4.55e-12,18;UBERON:0001557,1.72e-11,19;UBERON:0004807,3.92e-08,28;UBERON:0000077,6.91e-08,29 | |||
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|short_description=p23@CD1E | |short_description=p23@CD1E | ||
}} | }} |
Latest revision as of 21:01, 17 September 2015
Short description: | p23@CD1E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_CD1E_5end |
Coexpression cluster: | C419_acute_chronic_thymus_xeroderma_Burkitt_Hodgkin_CD4 |
Association with transcript: | -43bp_to_ENST00000464822_5end |
EntrezGene: | CD1E |
HGNC: | 1638 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 5.49e-09 | 25 |
pro-T cell | 5.49e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.14e-50 | 4 |
hemolymphoid system gland | 5.14e-50 | 4 |
thymic region | 5.14e-50 | 4 |
pharyngeal gland | 5.14e-50 | 4 |
thymus primordium | 5.14e-50 | 4 |
pharyngeal epithelium | 8.35e-34 | 6 |
hemopoietic organ | 3.65e-29 | 7 |
immune organ | 3.65e-29 | 7 |
neck | 8.54e-21 | 10 |
gland of gut | 8.54e-21 | 10 |
chordate pharynx | 8.54e-21 | 10 |
pharyngeal region of foregut | 8.54e-21 | 10 |
pharynx | 5.14e-19 | 11 |
entire pharyngeal arch endoderm | 5.14e-19 | 11 |
early pharyngeal endoderm | 5.14e-19 | 11 |
pharyngeal arch system | 4.55e-12 | 18 |
upper respiratory tract | 1.72e-11 | 19 |
respiratory system epithelium | 3.92e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 6.91e-08 | 29 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.49e-07 | 8 |