FFCP PHASE1:Hg19::chr19:571340..571366,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=682 | |EntrezGene=682 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1116 | |HGNC=1116 | ||
|TSSclassifier=strong | |||
|UniProt=A6NJW1,P35613,Q54A51 | |UniProt=A6NJW1,P35613,Q54A51 | ||
|association_with_transcript=15bp_to_NM_198591,uc002loy.2_5end | |association_with_transcript=15bp_to_NM_198591,uc002loy.2_5end | ||
|cluster_id=chr19:571340..571366,+ | |||
|coexpression_cluster_id=C69 | |coexpression_cluster_id=C69 | ||
|description=CAGE_peak_6_at_BSG_5end | |description=CAGE_peak_6_at_BSG_5end | ||
|id=chr19:571340..571366,+ | |id=chr19:571340..571366,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.28e-07;2!CL:0000558;1.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.39e-07,2;CL:0000765,3.39e-07,2;CL:0000050,3.39e-07,2;CL:0000038,3.39e-07,2;CL:0000558,3.39e-07,2;CL:0000547,3.39e-07,2;CL:0000549,3.39e-07,2;CL:0000550,3.39e-07,2;CL:0000552,3.39e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.61e-14!235;DOID:305!6.47e-14!106;DOID:14566!9.07e-14!239;DOID:0050687!2.96e-13!143;DOID:0050686!2.92e-07!137 | |ontology_enrichment_disease=DOID:162!1.61e-14!235;DOID:305!6.47e-14!106;DOID:14566!9.07e-14!239;DOID:0050687!2.96e-13!143;DOID:0050686!2.92e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:5093;2.53e-08;4!DOID:1612;2.53e-08;4!DOID:3910;1.28e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.64e-10,235;DOID:14566,4.05e-10,239;DOID:305,3.49e-09,106;DOID:0050686,9.81e-09,137;DOID:5093,1.32e-08,4;DOID:1612,1.32e-08,4;DOID:0050687,4.26e-08,143;DOID:3910,5.79e-08,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.28e-07;2!UBERON:0002173;1.28e-07;2!UBERON:0002186;1.28e-07;2!UBERON:0000945;8.11e-07;5!UBERON:0010039;8.11e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,5.79e-08,2;UBERON:0002173,5.79e-08,2;UBERON:0002186,5.79e-08,2 | |||
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| ||
|short_description=p6@BSG | |short_description=p6@BSG | ||
}} | }} |
Latest revision as of 04:34, 20 September 2015
Short description: | p6@BSG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_BSG_5end |
Coexpression cluster: | C69_anaplastic_CD14_cord_hairy_mycosis_adult_NK |
Association with transcript: | 15bp_to_NM_198591, uc002loy.2_5end |
EntrezGene: | BSG |
HGNC: | 1116 |
UniProt: | A6NJW1P35613Q54A51 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.39e-07 | 2 |
erythroblast | 3.39e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 3.39e-07 | 2 |
erythroid progenitor cell | 3.39e-07 | 2 |
reticulocyte | 3.39e-07 | 2 |
proerythroblast | 3.39e-07 | 2 |
basophilic erythroblast | 3.39e-07 | 2 |
polychromatophilic erythroblast | 3.39e-07 | 2 |
orthochromatic erythroblast | 3.39e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 5.79e-08 | 2 |
alveolar duct | 5.79e-08 | 2 |
bronchiole | 5.79e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.64e-10 | 235 |
disease of cellular proliferation | 4.05e-10 | 239 |
carcinoma | 3.49e-09 | 106 |
organ system cancer | 9.81e-09 | 137 |
thoracic cancer | 1.32e-08 | 4 |
breast cancer | 1.32e-08 | 4 |
cell type cancer | 4.26e-08 | 143 |
lung adenocarcinoma | 5.79e-08 | 2 |