FFCP PHASE1:Hg19::chr19:47105424..47105433,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=808 | |EntrezGene=808 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1449 | |HGNC=1449 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_uc010xyc.1_5end | |association_with_transcript=16bp_to_uc010xyc.1_5end | ||
|cluster_id=chr19:47105424..47105433,+ | |||
|coexpression_cluster_id=C1242 | |coexpression_cluster_id=C1242 | ||
|description=CAGE_peak_32_at_CALM3_5end | |description=CAGE_peak_32_at_CALM3_5end | ||
|id=chr19:47105424..47105433,+ | |id=chr19:47105424..47105433,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.44e-13;5!CL:0000163;8.17e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.52e-13,5;CL:0002028,2.52e-13,5;CL:0000163,8.31e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.86e-09;2!UBERON:0006601;5.22e-08;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!6.05e-41!34;UBERON:0002020!1.51e-40!34;UBERON:0003528!1.51e-40!34;UBERON:0001869!6.28e-40!32;UBERON:0002780!9.46e-40!41;UBERON:0001890!9.46e-40!41;UBERON:0006240!9.46e-40!41;UBERON:0003080!1.14e-38!42;UBERON:0002791!3.20e-38!33;UBERON:0001049!1.16e-34!57;UBERON:0005068!1.16e-34!57;UBERON:0006241!1.16e-34!57;UBERON:0007135!1.16e-34!57;UBERON:0002619!1.51e-33!22;UBERON:0002616!2.95e-33!59;UBERON:0000955!1.63e-31!69;UBERON:0006238!1.63e-31!69;UBERON:0000956!3.53e-29!25;UBERON:0000203!3.53e-29!25;UBERON:0001950!4.12e-28!20;UBERON:0005743!8.56e-28!86;UBERON:0001017!1.52e-27!82;UBERON:0003056!6.46e-27!61;UBERON:0000073!3.28e-26!94;UBERON:0001016!3.28e-26!94;UBERON:0003075!2.82e-24!86;UBERON:0007284!2.82e-24!86;UBERON:0002346!7.28e-23!90;UBERON:0007023!7.29e-21!115;UBERON:0000200!2.92e-19!6;UBERON:0002420!1.07e-17!9;UBERON:0007245!1.07e-17!9;UBERON:0010009!1.07e-17!9;UBERON:0010011!1.07e-17!9;UBERON:0000454!1.07e-17!9;UBERON:0000349!3.22e-17!5;UBERON:0000153!3.71e-17!129;UBERON:0007811!3.71e-17!129;UBERON:0000033!4.47e-17!123;UBERON:0001871!1.94e-14!7;UBERON:0002308!1.05e-12!9;UBERON:0000125!1.05e-12!9;UBERON:0009663!6.03e-12!7;UBERON:0004121!3.47e-11!169;UBERON:0000924!9.38e-11!173;UBERON:0006601!9.38e-11!173;UBERON:0002771!4.38e-10!3;UBERON:0000369!1.13e-08!4;UBERON:0002435!1.13e-08!4;UBERON:0000204!1.13e-08!4;UBERON:0010082!1.13e-08!4;UBERON:0000025!3.24e-08!194;UBERON:0001876!6.44e-08!2;UBERON:0001870!6.65e-08!2;UBERON:0001954!9.27e-08!2;UBERON:0003022!9.27e-08!2;UBERON:0002421!9.27e-08!2;UBERON:0002600!9.27e-08!2 | |ontology_enrichment_uberon=UBERON:0001893!6.05e-41!34;UBERON:0002020!1.51e-40!34;UBERON:0003528!1.51e-40!34;UBERON:0001869!6.28e-40!32;UBERON:0002780!9.46e-40!41;UBERON:0001890!9.46e-40!41;UBERON:0006240!9.46e-40!41;UBERON:0003080!1.14e-38!42;UBERON:0002791!3.20e-38!33;UBERON:0001049!1.16e-34!57;UBERON:0005068!1.16e-34!57;UBERON:0006241!1.16e-34!57;UBERON:0007135!1.16e-34!57;UBERON:0002619!1.51e-33!22;UBERON:0002616!2.95e-33!59;UBERON:0000955!1.63e-31!69;UBERON:0006238!1.63e-31!69;UBERON:0000956!3.53e-29!25;UBERON:0000203!3.53e-29!25;UBERON:0001950!4.12e-28!20;UBERON:0005743!8.56e-28!86;UBERON:0001017!1.52e-27!82;UBERON:0003056!6.46e-27!61;UBERON:0000073!3.28e-26!94;UBERON:0001016!3.28e-26!94;UBERON:0003075!2.82e-24!86;UBERON:0007284!2.82e-24!86;UBERON:0002346!7.28e-23!90;UBERON:0007023!7.29e-21!115;UBERON:0000200!2.92e-19!6;UBERON:0002420!1.07e-17!9;UBERON:0007245!1.07e-17!9;UBERON:0010009!1.07e-17!9;UBERON:0010011!1.07e-17!9;UBERON:0000454!1.07e-17!9;UBERON:0000349!3.22e-17!5;UBERON:0000153!3.71e-17!129;UBERON:0007811!3.71e-17!129;UBERON:0000033!4.47e-17!123;UBERON:0001871!1.94e-14!7;UBERON:0002308!1.05e-12!9;UBERON:0000125!1.05e-12!9;UBERON:0009663!6.03e-12!7;UBERON:0004121!3.47e-11!169;UBERON:0000924!9.38e-11!173;UBERON:0006601!9.38e-11!173;UBERON:0002771!4.38e-10!3;UBERON:0000369!1.13e-08!4;UBERON:0002435!1.13e-08!4;UBERON:0000204!1.13e-08!4;UBERON:0010082!1.13e-08!4;UBERON:0000025!3.24e-08!194;UBERON:0001876!6.44e-08!2;UBERON:0001870!6.65e-08!2;UBERON:0001954!9.27e-08!2;UBERON:0003022!9.27e-08!2;UBERON:0002421!9.27e-08!2;UBERON:0002600!9.27e-08!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000369;2.81e-35;4!UBERON:0002435;2.81e-35;4!UBERON:0000204;2.81e-35;4!UBERON:0001869;2.59e-31;32!UBERON:0001893;8.79e-31;34!UBERON:0002420;1.31e-27;9!UBERON:0007245;1.31e-27;9!UBERON:0010009;1.31e-27;9!UBERON:0010011;1.31e-27;9!UBERON:0000454;1.31e-27;9!UBERON:0002791;8.25e-27;32!UBERON:0003528;3.24e-25;34!UBERON:0002020;3.24e-25;34!UBERON:0005383;9.45e-22;3!UBERON:0005382;9.45e-22;3!UBERON:0009663;1.72e-20;7!UBERON:0002780;6.87e-20;41!UBERON:0001890;6.87e-20;41!UBERON:0001950;4.14e-18;20!UBERON:0001874;5.97e-17;1!UBERON:0002619;1.52e-16;22!UBERON:0002902;1.53e-16;1!UBERON:0001882;1.53e-16;1!UBERON:0002022;1.53e-16;1!UBERON:0009899;1.53e-16;1!UBERON:0007190;1.53e-16;1!UBERON:0005403;1.53e-16;1!UBERON:0000125;4.31e-16;9!UBERON:0002308;4.31e-16;9!UBERON:0000956;1.21e-14;25!UBERON:0000203;1.21e-14;25!UBERON:0000073;2.36e-14;53!UBERON:0002616;2.36e-14;53!UBERON:0000349;3.88e-13;5!UBERON:0001017;5.27e-11;75!UBERON:0000955;1.40e-10;68!UBERON:0001871;1.18e-09;6!UBERON:0001873;3.86e-09;2!UBERON:0001876;6.17e-09;2!UBERON:0002360;6.17e-09;2!UBERON:0000094;6.17e-09;2!UBERON:0010743;6.17e-09;2!UBERON:0001016;1.51e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.03e-36,32;UBERON:0000369,1.67e-35,4;UBERON:0002435,1.67e-35,4;UBERON:0000204,1.67e-35,4;UBERON:0010082,1.67e-35,4;UBERON:0001893,1.40e-34,34;UBERON:0002791,4.94e-29,32;UBERON:0002780,1.02e-28,41;UBERON:0001890,1.02e-28,41;UBERON:0003080,1.02e-28,41;UBERON:0006240,1.02e-28,41;UBERON:0002420,1.14e-27,9;UBERON:0007245,1.14e-27,9;UBERON:0010009,1.14e-27,9;UBERON:0010011,1.14e-27,9;UBERON:0000454,1.14e-27,9;UBERON:0003528,2.40e-27,34;UBERON:0002020,2.40e-27,34;UBERON:0000073,3.45e-22,53;UBERON:0002616,3.45e-22,53;UBERON:0005383,9.47e-22,3;UBERON:0005382,9.47e-22,3;UBERON:0001049,5.51e-21,56;UBERON:0005068,5.51e-21,56;UBERON:0006241,5.51e-21,56;UBERON:0007135,5.51e-21,56;UBERON:0009663,1.28e-20,7;UBERON:0003056,3.09e-19,61;UBERON:0001950,3.93e-18,20;UBERON:0001017,1.64e-17,81;UBERON:0001874,5.53e-17,1;UBERON:0000955,5.92e-17,68;UBERON:0006238,5.92e-17,68;UBERON:0001882,7.57e-17,1;UBERON:0005403,7.57e-17,1;UBERON:0007190,1.04e-16,1;UBERON:0002022,1.21e-16,1;UBERON:0002902,1.41e-16,1;UBERON:0009899,1.41e-16,1;UBERON:0002619,1.45e-16,22;UBERON:0000125,3.42e-16,9;UBERON:0002308,3.42e-16,9;UBERON:0001016,1.03e-15,89;UBERON:0000956,1.16e-14,25;UBERON:0000203,1.16e-14,25;UBERON:0003075,3.52e-14,82;UBERON:0007284,3.52e-14,82;UBERON:0002346,1.72e-13,86;UBERON:0000349,3.43e-13,5;UBERON:0007023,1.68e-12,114;UBERON:0010371,4.87e-11,104;UBERON:0001871,1.13e-09,6;UBERON:0001873,4.02e-09,2;UBERON:0010122,4.02e-09,2;UBERON:0001876,7.49e-09,2;UBERON:0002360,8.09e-09,2;UBERON:0000094,8.09e-09,2;UBERON:0010743,8.09e-09,2;UBERON:0010314,1.56e-08,132;UBERON:0004121,7.63e-08,171;UBERON:0000924,7.63e-08,171;UBERON:0006601,7.63e-08,171 | |||
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| ||
|short_description=p32@CALM3 | |short_description=p32@CALM3 | ||
}} | }} |
Latest revision as of 20:47, 18 September 2015
Short description: | p32@CALM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_CALM3_5end |
Coexpression cluster: | C1242_Mast_anaplastic_putamen_caudate_nucleus_occipital_insula |
Association with transcript: | 16bp_to_uc010xyc.1_5end |
EntrezGene: | CALM3 |
HGNC: | 1449 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.52e-13 | 5 |
basophil mast progenitor cell | 2.52e-13 | 5 |
endocrine cell | 8.31e-08 | 9 |