FFCP PHASE1:Hg19::chr19:4456764..4456784,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:4456764..4456784,+ | |||
|coexpression_cluster_id=C73 | |coexpression_cluster_id=C73 | ||
|description=CAGE_peak_at_chr19:4456764..4456784,+ | |description=CAGE_peak_at_chr19:4456764..4456784,+ | ||
|id=chr19:4456764..4456784,+ | |id=chr19:4456764..4456784,+ | ||
|ontology_enrichment_celltype=CL:0000057!8.18e-11!75;CL:0000055!3.18e-09!180;CL:0002620!1.61e-07!23 | |ontology_enrichment_celltype=CL:0000057!8.18e-11!75;CL:0000055!3.18e-09!180;CL:0002620!1.61e-07!23 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;4.25e-07;3!DOID:127;4.25e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.16e-07,3;DOID:127,2.16e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000468!4.59e-09!659;UBERON:0002780!1.04e-07!41;UBERON:0001890!1.04e-07!41;UBERON:0006240!1.04e-07!41;UBERON:0001049!2.12e-07!57;UBERON:0005068!2.12e-07!57;UBERON:0006241!2.12e-07!57;UBERON:0007135!2.12e-07!57;UBERON:0000467!2.48e-07!625;UBERON:0003056!2.72e-07!61;UBERON:0003080!3.06e-07!42;UBERON:0000480!3.45e-07!626;UBERON:0000475!5.37e-07!365;UBERON:0007023!6.08e-07!115;UBERON:0000955!7.15e-07!69;UBERON:0006238!7.15e-07!69;UBERON:0002097!7.79e-07!40 | |ontology_enrichment_uberon=UBERON:0000468!4.59e-09!659;UBERON:0002780!1.04e-07!41;UBERON:0001890!1.04e-07!41;UBERON:0006240!1.04e-07!41;UBERON:0001049!2.12e-07!57;UBERON:0005068!2.12e-07!57;UBERON:0006241!2.12e-07!57;UBERON:0007135!2.12e-07!57;UBERON:0000467!2.48e-07!625;UBERON:0003056!2.72e-07!61;UBERON:0003080!3.06e-07!42;UBERON:0000480!3.45e-07!626;UBERON:0000475!5.37e-07!365;UBERON:0007023!6.08e-07!115;UBERON:0000955!7.15e-07!69;UBERON:0006238!7.15e-07!69;UBERON:0002097!7.79e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;2.14e-10;4!UBERON:0010133;2.14e-10;4!UBERON:0000349;2.23e-10;5!UBERON:0002780;7.29e-10;41!UBERON:0001890;7.29e-10;41!UBERON:0002791;1.73e-09;32!UBERON:0001869;3.65e-09;32!UBERON:0000369;5.33e-09;4!UBERON:0002435;5.33e-09;4!UBERON:0000204;5.33e-09;4!UBERON:0003528;5.58e-09;34!UBERON:0002020;5.58e-09;34!UBERON:0001893;1.36e-08;34!UBERON:0002619;2.36e-08;22!UBERON:0002420;3.00e-08;9!UBERON:0007245;3.00e-08;9!UBERON:0010009;3.00e-08;9!UBERON:0010011;3.00e-08;9!UBERON:0000454;3.00e-08;9!UBERON:0005383;2.32e-07;3!UBERON:0005382;2.32e-07;3!UBERON:0000956;4.01e-07;25!UBERON:0000203;4.01e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,8.52e-14,41;UBERON:0001890,8.52e-14,41;UBERON:0003080,8.52e-14,41;UBERON:0006240,8.52e-14,41;UBERON:0000349,3.61e-11,5;UBERON:0003056,6.17e-11,61;UBERON:0002791,9.29e-11,32;UBERON:0001869,9.29e-11,32;UBERON:0003296,2.12e-10,4;UBERON:0010133,2.12e-10,4;UBERON:0003528,6.26e-10,34;UBERON:0002020,6.26e-10,34;UBERON:0001893,6.26e-10,34;UBERON:0000073,1.33e-09,53;UBERON:0002616,1.33e-09,53;UBERON:0000369,1.88e-09,4;UBERON:0002435,1.88e-09,4;UBERON:0000204,1.88e-09,4;UBERON:0010082,1.88e-09,4;UBERON:0001049,7.64e-09,56;UBERON:0005068,7.64e-09,56;UBERON:0006241,7.64e-09,56;UBERON:0007135,7.64e-09,56;UBERON:0002420,1.06e-08,9;UBERON:0007245,1.06e-08,9;UBERON:0010009,1.06e-08,9;UBERON:0010011,1.06e-08,9;UBERON:0000454,1.06e-08,9;UBERON:0002619,1.42e-08,22;UBERON:0005383,1.53e-07,3;UBERON:0005382,1.53e-07,3;UBERON:0000956,2.60e-07,25;UBERON:0000203,2.60e-07,25;UBERON:0000955,3.05e-07,68;UBERON:0006238,3.05e-07,68;UBERON:0010314,4.46e-07,132;UBERON:0003075,8.79e-07,82;UBERON:0007284,8.79e-07,82 | |||
|phase1_expression=1.2717486548939,0.214100523890983,0.986680828671798,0,1.34088328328186,0.872338524100369,0,0,0.783556884599516,0,0,0,0.263766978228454,0.247532705920093,0,0.672325146451775,0.602694528023977,1.46062018077475,2.92759679274304,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0.739508020333575,0,0,0,0,0.401088894940283,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0,0,0.464858073811369,0.411167888021826,0.309706370895104,0.28769239232215,0,0,0,0.645484683583826,0,0.188242339542605,0,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0,0,0.56738522469114,0,0.251248665256743,0,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0,0.209658645508376,0.336985893439485,0.150176892841506,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,1.44575660953827,0,0.289693037921647,0,0.486634870302636,0.283604451492204,0,0.263504357079378,0.0654895377488563,0,0,0.649094787309367,0.348259474598534,0.398873881556595,1.43094374583205,0,0.74291500265913,0,0,0,0,0,0.825354125820202,0,1.03366703667732,0,0,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0.17859945656816,0,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0.12663051166458,3.57504788195691,2.58152958673932,1.06400514659507,0,1.06748995729705,0.74000264525148,0.933633106199299,0,0.817309515567294,0.151357427644931,0.576175924479999,0.234321431833797,1.5608003841516,2.2818872861778,0.448346041655403,0.117434498643765,0,0.280901613404497,0.204154171254893,0.245668634623536,0.103325781175765,0,0.247266929278557,3.64064544775211,1.43723628363248,0.168336113954066,0.375355559615893,0.277064115484183,0.438977620880838,0.30648779579902,0.150238058906597,0,2.33206526395521,0.213557388818567,0.635795703478686,0.300091096084402,0.515262646192195,2.83404594050192,0.930584281657949,1.18143432568886,0.487185025805993,0.504867548488229,0.644349290496095,1.45481451136931,1.42003837006646,0.604512589365842,0.508681776931463,0.386521706326594,0,0.286804595389004,0,0,0,0.10366105501537,0,0,1.56449532329816,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,1.2347220339942,0,0,0,0,0,0,0.343135620597051,0.768251997860379,0,0.201057944823262,0.185176890317059,0.325808305310325,1.03993478527958,0,0.231860809950154,0.352226082707465,0,0,0,0,0,0,0.702012795417713,0,0,0.503946384596579,0,0.268675568108545,0.290633938513962,0,0.985326475791887,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0,0,0,0.448524337381443,0,0,1.29271715757778,0,1.690605505112,0.531876233169741,0,0,0,0.799266537048298,0.57191197463259,0.542621605391443,2.46972101034231,0.65147236858747,0,0,0.904318131178758,1.74306691720059,0.399891964728228,0,0,2.10833939483032,0.479249710983165,0,0,0.579125226670317,0,0.358121926479791,0,0.197030760201927,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,1.24782516918484,0.713715955188647,1.10391690523754,0.35142424497814,0.902838299183157,0,0,0.664225598535437,0.184369168541703,0.781952530212746,0.195801157462741,0,0.413536052245775,0,0.106727557803444,0,0,0.604780586659361,0.992431231275107,2.14846762603287,0.841980283299221,0.640695746278505,1.02341449813341,0.482561763430822,0,0.308419387605311,0.710246901252508,0.574890092096664,0,0.232420756919918,0,1.00253235151642,0,0.34444334449382,0.364182336013434,0.393373244878272,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0.219259876645935,0.522870902049801,0,0.328014645699706,0,0,0.183138929636687,0.247528499761764,1.14853107599234,0,0,0,0.154048617114644,0,0.413509717453592,0.429680979473094,0.290033387828457,0.170453254832202,0.356128142586949,0.330569830721956,0.960950336825531,1.14851441245126,0.6069466851333,1.39453664789186,2.83331112147576,0.6970372701606,0.308033580176089,0.532306030317022,0,0.18532421910392,0.429374660225974,0,0.632758849437452,0,0.255897791311334,0.42793898803392,0.95460974377781,0,0.539617372749944,0.274537029736055,0.235624804691373,1.01091240786658,1.58510321173008,0,0,0.974853958525138,0,0.136499911407986,1.1312434556297,0,0.551365343546124,0,1.31535265576129,0,0,0.811641507850816,0.30982349809975,0,0.286822704408103,0.0982490410131212,0.7133421029625,0,0.422215270595328,0.658589785919804,0.379473173765715,0.349934720244983,0.192444225451024,0,0,0,0,0,0,0.689170200620878,4.56702848308952,2.29391162142713,2.27858874869665,0.952927101831156,0.822724546172388,0.648473311192717,2.70015718619057,3.17250070517708,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.333698283423817,0,0.556812347790485,0,1.08182271390393,0,0,0,0.146508179271894,0,0,0,0,0,0.614321404198464,1.9882952955326,3.09472716103128,0.667852230137435,0,1.05562704063997,0,0.552567831062295,0.251932747854276,0.20453736500431,0,1.24415835064723,0.179736702294654,0,0,0.394573622547734,0,1.11136990144637,0,0.185536196323703,0,0,0.08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| ||
|short_description=p@chr19:4456764..4456784,+ | |short_description=p@chr19:4456764..4456784,+ | ||
}} | }} |
Latest revision as of 14:37, 27 July 2015
Short description: | p@chr19:4456764..4456784, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:4456764..4456784, + |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.16e-07 | 3 |
leiomyoma | 2.16e-07 | 3 |