FFCP PHASE1:Hg19::chr19:3600549..3600592,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6915 | |EntrezGene=6915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11608 | |HGNC=11608 | ||
|TSSclassifier=strong | |||
|UniProt=P21731 | |UniProt=P21731 | ||
|association_with_transcript=39bp_to_AY429110_5end | |association_with_transcript=39bp_to_AY429110_5end | ||
|cluster_id=chr19:3600549..3600592,- | |||
|coexpression_cluster_id=C302 | |coexpression_cluster_id=C302 | ||
|description=CAGE_peak_5_at_TBXA2R_5end | |description=CAGE_peak_5_at_TBXA2R_5end | ||
|id=chr19:3600549..3600592,- | |id=chr19:3600549..3600592,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002593;5.69e-21;2!CL:0002188;2.74e-09;5!CL:0002595;3.22e-09;5!CL:1000746;5.38e-07;7!CL:1000612;5.38e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,6.96e-21,2;CL:0002188,2.74e-09,5;CL:0002595,3.49e-09,5;CL:1000746,5.38e-07,7;CL:1000612,5.38e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1240;4.67e-12;39!DOID:8692;4.71e-12;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.48e-12,31;DOID:1240,5.72e-10,39;DOID:2531,8.40e-08,51;DOID:0060083,8.40e-08,51 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;5.69e-21;2!UBERON:0003834;3.22e-09;5!UBERON:0001533;3.22e-09;5!UBERON:0000074;5.38e-07;7!UBERON:0001229;5.38e-07;7!UBERON:0003513;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,6.96e-21,2;UBERON:0003834,3.49e-09,5;UBERON:0001533,3.49e-09,5;UBERON:0010532,5.38e-07,7;UBERON:0000074,5.38e-07,7;UBERON:0001229,5.38e-07,7;UBERON:0001230,5.38e-07,7;UBERON:0003220,5.38e-07,7;UBERON:0005749,5.38e-07,7;UBERON:0004199,5.38e-07,7;UBERON:0004209,5.38e-07,7;UBERON:0004198,5.38e-07,7;UBERON:0003513,6.39e-07,7 | |||
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| ||
|short_description=p5@TBXA2R | |short_description=p5@TBXA2R | ||
}} | }} |
Latest revision as of 12:23, 17 September 2015
Short description: | p5@TBXA2R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TBXA2R_5end |
Coexpression cluster: | C302_acute_peripheral_Neutrophils_NK_myelodysplastic_CD34_carcinoid |
Association with transcript: | 39bp_to_AY429110_5end |
EntrezGene: | TBXA2R |
HGNC: | 11608 |
UniProt: | P21731 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 6.96e-21 | 2 |
glomerular endothelial cell | 2.74e-09 | 5 |
smooth muscle cell of the subclavian artery | 3.49e-09 | 5 |
glomerular cell | 5.38e-07 | 7 |
kidney corpuscule cell | 5.38e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 6.96e-21 | 2 |
thoracic segment blood vessel | 3.49e-09 | 5 |
subclavian artery | 3.49e-09 | 5 |
primitive nephron | 5.38e-07 | 7 |
renal glomerulus | 5.38e-07 | 7 |
renal corpuscle | 5.38e-07 | 7 |
glomerular capsule | 5.38e-07 | 7 |
metanephric mesenchyme | 5.38e-07 | 7 |
glomerular tuft | 5.38e-07 | 7 |
S-shaped body | 5.38e-07 | 7 |
renal vesicle | 5.38e-07 | 7 |
comma-shaped body | 5.38e-07 | 7 |
trunk blood vessel | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.48e-12 | 31 |
leukemia | 5.72e-10 | 39 |
hematologic cancer | 8.40e-08 | 51 |
immune system cancer | 8.40e-08 | 51 |