FFCP PHASE1:Hg19::chr18:904443..904454,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116 | |EntrezGene=116 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=241 | |HGNC=241 | ||
|TSSclassifier=strong | |||
|UniProt=P18509 | |UniProt=P18509 | ||
|association_with_transcript=-489bp_to_NM_001099733,uc010dkg.2_5end | |association_with_transcript=-489bp_to_NM_001099733,uc010dkg.2_5end | ||
|cluster_id=chr18:904443..904454,+ | |||
|coexpression_cluster_id=C12 | |coexpression_cluster_id=C12 | ||
|description=CAGE_peak_6_at_ADCYAP1_5end | |description=CAGE_peak_6_at_ADCYAP1_5end | ||
|id=chr18:904443..904454,+ | |id=chr18:904443..904454,+ | ||
|ontology_enrichment_celltype=CL:0002274!5.91e-10!5;CL:0000457!5.91e-10!5;CL:0002191!5.91e-10!5;CL:0000097!5.91e-10!5;CL:0000831!5.91e-10!5;CL:0002028!5.91e-10!5 | |ontology_enrichment_celltype=CL:0002274!5.91e-10!5;CL:0000457!5.91e-10!5;CL:0002191!5.91e-10!5;CL:0000097!5.91e-10!5;CL:0000831!5.91e-10!5;CL:0002028!5.91e-10!5 | ||
|ontology_enrichment_celltype_v019=CL:0000097;3.45e-22;5!CL:0000163;1.32e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.84e-22,5;CL:0002028,3.84e-22,5;CL:0000163,1.40e-12,9 | |||
|ontology_enrichment_development_v019=UBERON:0006242;7.68e-13;1!UBERON:0006601;2.51e-08;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p6@ADCYAP1 | |short_description=p6@ADCYAP1 | ||
}} | }} |
Latest revision as of 21:04, 24 September 2015
Short description: | p6@ADCYAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ADCYAP1_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -489bp_to_NM_001099733, uc010dkg.2_5end |
EntrezGene: | ADCYAP1 |
HGNC: | 241 |
UniProt: | P18509 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.84e-22 | 5 |
basophil mast progenitor cell | 3.84e-22 | 5 |
endocrine cell | 1.40e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
brainstem | 3.55e-49 | 6 |
medulla oblongata | 4.27e-36 | 3 |
myelencephalon | 4.27e-36 | 3 |
future myelencephalon | 4.27e-36 | 3 |
posterior neural tube | 5.70e-28 | 15 |
chordal neural plate | 5.70e-28 | 15 |
locus ceruleus | 1.02e-24 | 2 |
brainstem nucleus | 1.02e-24 | 2 |
hindbrain nucleus | 1.02e-24 | 2 |
segmental subdivision of hindbrain | 1.19e-24 | 12 |
hindbrain | 1.19e-24 | 12 |
presumptive hindbrain | 1.19e-24 | 12 |
segmental subdivision of nervous system | 9.31e-23 | 13 |
pons | 7.90e-17 | 3 |
neural tube | 1.03e-15 | 56 |
neural rod | 1.03e-15 | 56 |
future spinal cord | 1.03e-15 | 56 |
neural keel | 1.03e-15 | 56 |
regional part of nervous system | 3.45e-13 | 53 |
regional part of brain | 3.45e-13 | 53 |
central nervous system | 6.66e-13 | 81 |
surface | 7.68e-13 | 1 |
nervous system | 1.62e-11 | 89 |
neural plate | 1.87e-10 | 82 |
presumptive neural plate | 1.87e-10 | 82 |
brain | 5.61e-10 | 68 |
future brain | 5.61e-10 | 68 |
ecto-epithelium | 6.07e-10 | 104 |
neurectoderm | 6.34e-10 | 86 |
adult organism | 4.79e-09 | 114 |
pituitary gland | 2.58e-07 | 2 |
amygdala | 3.09e-07 | 2 |
middle frontal gyrus | 3.93e-07 | 2 |
open tracheal system trachea | 4.98e-07 | 2 |