FFCP PHASE1:Hg19::chr18:53068982..53068993,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt=B4DUG3 | |UniProt=B4DUG3 | ||
|association_with_transcript=-61bp_to_ENST00000537856,uc010xdu.1_5end | |association_with_transcript=-61bp_to_ENST00000537856,uc010xdu.1_5end | ||
|cluster_id=chr18:53068982..53068993,- | |||
|coexpression_cluster_id=C1237 | |coexpression_cluster_id=C1237 | ||
|description=CAGE_peak_20_at_TCF4_5end | |description=CAGE_peak_20_at_TCF4_5end | ||
|id=chr18:53068982..53068993,- | |id=chr18:53068982..53068993,- | ||
|ontology_enrichment_celltype=CL:0002139!1.56e-24!24;CL:0000115!4.66e-20!35;CL:0000071!7.22e-19!18;CL:0002546!7.22e-19!18;CL:0002078!6.42e-18!44;CL:0000213!1.50e-14!57;CL:0000215!1.50e-14!57;CL:1000413!3.21e-10!9;CL:0000222!3.58e-09!119;CL:0002543!2.14e-07!6;CL:0002544!2.23e-07!6;CL:0005020!3.26e-07!6;CL:0002138!3.26e-07!6;CL:0005022!3.26e-07!6 | |ontology_enrichment_celltype=CL:0002139!1.56e-24!24;CL:0000115!4.66e-20!35;CL:0000071!7.22e-19!18;CL:0002546!7.22e-19!18;CL:0002078!6.42e-18!44;CL:0000213!1.50e-14!57;CL:0000215!1.50e-14!57;CL:1000413!3.21e-10!9;CL:0000222!3.58e-09!119;CL:0002543!2.14e-07!6;CL:0002544!2.23e-07!6;CL:0005020!3.26e-07!6;CL:0002138!3.26e-07!6;CL:0005022!3.26e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.98e-53;24!CL:0000115;1.31e-41;36!CL:0000071;6.58e-41;18!CL:0002078;8.02e-28;45!CL:1000413;2.96e-21;9!CL:0000213;3.42e-18;58!CL:0000215;3.42e-18;58!CL:0002544;7.90e-15;6!CL:0002543;9.74e-15;6!CL:0002138;5.95e-14;6!CL:0002618;1.21e-08;3!CL:0002144;3.68e-08;3!CL:0002188;1.02e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.00e-54,24;CL:0000115,4.90e-50,36;CL:0002078,4.19e-41,45;CL:0000071,6.45e-41,18;CL:0002546,6.45e-41,18;CL:0000213,9.43e-30,58;CL:0000215,9.43e-30,58;CL:1000413,3.41e-21,9;CL:0002543,8.51e-15,6;CL:0002544,9.34e-15,6;CL:0005020,2.20e-14,6;CL:0002138,2.20e-14,6;CL:0005022,2.20e-14,6;CL:0000222,2.73e-12,121;CL:0002618,1.26e-08,3;CL:0002144,3.59e-08,3;CL:0000076,5.57e-08,63;CL:0002188,1.04e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;6.58e-41;18!CL:0005022;5.95e-14;6!UBERON:0004872;1.40e-07;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.00e-30!115;UBERON:0000025!1.32e-26!194;UBERON:0004111!1.68e-25!241;UBERON:0000477!1.09e-21!286;UBERON:0001049!5.60e-19!57;UBERON:0005068!5.60e-19!57;UBERON:0006241!5.60e-19!57;UBERON:0007135!5.60e-19!57;UBERON:0001986!7.22e-19!18;UBERON:0004638!7.22e-19!18;UBERON:0004852!7.22e-19!18;UBERON:0001017!1.24e-18!82;UBERON:0000055!1.13e-17!69;UBERON:0005743!1.23e-17!86;UBERON:0000073!2.89e-17!94;UBERON:0001016!2.89e-17!94;UBERON:0004872!3.51e-17!84;UBERON:0000955!6.08e-17!69;UBERON:0006238!6.08e-17!69;UBERON:0003080!8.37e-17!42;UBERON:0001893!1.71e-16!34;UBERON:0002020!3.35e-16!34;UBERON:0003528!3.35e-16!34;UBERON:0002780!4.21e-16!41;UBERON:0001890!4.21e-16!41;UBERON:0006240!4.21e-16!41;UBERON:0002791!8.83e-16!33;UBERON:0002616!1.13e-15!59;UBERON:0001869!2.05e-15!32;UBERON:0001981!8.17e-15!60;UBERON:0007500!8.17e-15!60;UBERON:0004537!8.17e-15!60;UBERON:0006965!8.17e-15!60;UBERON:0000483!1.04e-14!309;UBERON:0000119!1.49e-14!312;UBERON:0006914!4.05e-14!25;UBERON:0000487!5.84e-14!22;UBERON:0002049!6.22e-14!79;UBERON:0007798!6.22e-14!79;UBERON:0002346!8.26e-14!90;UBERON:0000956!1.04e-13!25;UBERON:0000203!1.04e-13!25;UBERON:0003075!3.34e-13!86;UBERON:0007284!3.34e-13!86;UBERON:0001009!7.25e-13!113;UBERON:0000468!1.98e-12!659;UBERON:0002619!5.37e-12!22;UBERON:0004535!7.50e-12!110;UBERON:0003914!9.83e-12!118;UBERON:0001950!1.31e-10!20;UBERON:0003915!3.21e-10!9;UBERON:0004700!3.21e-10!9;UBERON:0001917!3.21e-10!9;UBERON:0000467!4.40e-10!625;UBERON:0000480!5.66e-10!626;UBERON:0003056!1.03e-09!61;UBERON:0000475!1.49e-07!365;UBERON:0001637!2.56e-07!42;UBERON:0003509!2.56e-07!42;UBERON:0004572!2.56e-07!42;UBERON:0000947!2.60e-07!21;UBERON:0010191!2.60e-07!21;UBERON:0001638!7.98e-07!9;UBERON:0003920!7.98e-07!9;UBERON:0004582!7.98e-07!9;UBERON:0001871!9.09e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!3.00e-30!115;UBERON:0000025!1.32e-26!194;UBERON:0004111!1.68e-25!241;UBERON:0000477!1.09e-21!286;UBERON:0001049!5.60e-19!57;UBERON:0005068!5.60e-19!57;UBERON:0006241!5.60e-19!57;UBERON:0007135!5.60e-19!57;UBERON:0001986!7.22e-19!18;UBERON:0004638!7.22e-19!18;UBERON:0004852!7.22e-19!18;UBERON:0001017!1.24e-18!82;UBERON:0000055!1.13e-17!69;UBERON:0005743!1.23e-17!86;UBERON:0000073!2.89e-17!94;UBERON:0001016!2.89e-17!94;UBERON:0004872!3.51e-17!84;UBERON:0000955!6.08e-17!69;UBERON:0006238!6.08e-17!69;UBERON:0003080!8.37e-17!42;UBERON:0001893!1.71e-16!34;UBERON:0002020!3.35e-16!34;UBERON:0003528!3.35e-16!34;UBERON:0002780!4.21e-16!41;UBERON:0001890!4.21e-16!41;UBERON:0006240!4.21e-16!41;UBERON:0002791!8.83e-16!33;UBERON:0002616!1.13e-15!59;UBERON:0001869!2.05e-15!32;UBERON:0001981!8.17e-15!60;UBERON:0007500!8.17e-15!60;UBERON:0004537!8.17e-15!60;UBERON:0006965!8.17e-15!60;UBERON:0000483!1.04e-14!309;UBERON:0000119!1.49e-14!312;UBERON:0006914!4.05e-14!25;UBERON:0000487!5.84e-14!22;UBERON:0002049!6.22e-14!79;UBERON:0007798!6.22e-14!79;UBERON:0002346!8.26e-14!90;UBERON:0000956!1.04e-13!25;UBERON:0000203!1.04e-13!25;UBERON:0003075!3.34e-13!86;UBERON:0007284!3.34e-13!86;UBERON:0001009!7.25e-13!113;UBERON:0000468!1.98e-12!659;UBERON:0002619!5.37e-12!22;UBERON:0004535!7.50e-12!110;UBERON:0003914!9.83e-12!118;UBERON:0001950!1.31e-10!20;UBERON:0003915!3.21e-10!9;UBERON:0004700!3.21e-10!9;UBERON:0001917!3.21e-10!9;UBERON:0000467!4.40e-10!625;UBERON:0000480!5.66e-10!626;UBERON:0003056!1.03e-09!61;UBERON:0000475!1.49e-07!365;UBERON:0001637!2.56e-07!42;UBERON:0003509!2.56e-07!42;UBERON:0004572!2.56e-07!42;UBERON:0000947!2.60e-07!21;UBERON:0010191!2.60e-07!21;UBERON:0001638!7.98e-07!9;UBERON:0003920!7.98e-07!9;UBERON:0004582!7.98e-07!9;UBERON:0001871!9.09e-07!7 | ||
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| ||
|short_description=p20@TCF4 | |short_description=p20@TCF4 | ||
}} | }} |
Latest revision as of 20:54, 19 September 2015
Short description: | p20@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_TCF4_5end |
Coexpression cluster: | C1237_Endothelial_Preadipocyte_Lymphatic_Renal_lung_heart_skin |
Association with transcript: | -61bp_to_ENST00000537856, uc010xdu.1_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | B4DUG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.00e-54 | 24 |
endothelial cell | 4.90e-50 | 36 |
meso-epithelial cell | 4.19e-41 | 45 |
blood vessel endothelial cell | 6.45e-41 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.45e-41 | 18 |
lining cell | 9.43e-30 | 58 |
barrier cell | 9.43e-30 | 58 |
endothelial cell of artery | 3.41e-21 | 9 |
vein endothelial cell | 8.51e-15 | 6 |
aortic endothelial cell | 9.34e-15 | 6 |
lymphangioblast | 2.20e-14 | 6 |
endothelial cell of lymphatic vessel | 2.20e-14 | 6 |
vascular lymphangioblast | 2.20e-14 | 6 |
mesodermal cell | 2.73e-12 | 121 |
endothelial cell of umbilical vein | 1.26e-08 | 3 |
capillary endothelial cell | 3.59e-08 | 3 |
squamous epithelial cell | 5.57e-08 | 63 |
glomerular endothelial cell | 1.04e-07 | 5 |