FFCP PHASE1:Hg19::chr18:35250432..35250444,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:35250432..35250444,+ | |||
|coexpression_cluster_id=C97 | |coexpression_cluster_id=C97 | ||
|description=CAGE_peak_at_chr18:35250432..35250444,+ | |description=CAGE_peak_at_chr18:35250432..35250444,+ | ||
|id=chr18:35250432..35250444,+ | |id=chr18:35250432..35250444,+ | ||
|ontology_enrichment_celltype=CL:0000039!1.35e-20!7;CL:0000586!1.35e-20!7;CL:0000242!1.14e-12!2 | |ontology_enrichment_celltype=CL:0000039!1.35e-20!7;CL:0000586!1.35e-20!7;CL:0000242!1.14e-12!2 | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.85e-12;2!CL:0000242;1.85e-12;2!CL:1000415;2.07e-12;2!CL:0000322;1.30e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.85e-12,2;CL:1000415,2.07e-12,2;CL:0000322,1.21e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4960!2.37e-07!1;DOID:0070004!2.37e-07!1;DOID:1036!3.94e-07!8;DOID:305!8.20e-07!106 | |ontology_enrichment_disease=DOID:4960!2.37e-07!1;DOID:0070004!2.37e-07!1;DOID:1036!3.94e-07!8;DOID:305!8.20e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:4960;4.10e-23;1!DOID:0070004;4.10e-23;1!DOID:1325;1.23e-13;7!DOID:3904;1.23e-13;7!DOID:3910;2.90e-12;2!DOID:3905;7.96e-11;9!DOID:3119;2.85e-07;14!DOID:5409;6.50e-07;4!DOID:1324;7.41e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,6.40e-23,1;DOID:0070004,6.40e-23,1;DOID:1325,1.15e-13,7;DOID:3904,1.15e-13,7;DOID:3910,2.59e-12,2;DOID:3905,7.58e-11,9;DOID:305,1.65e-07,106;DOID:0050687,1.95e-07,143;DOID:3119,2.68e-07,14;DOID:162,2.69e-07,235;DOID:14566,3.89e-07,239;DOID:5409,6.50e-07,4;DOID:1324,7.20e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0001950!1.13e-15!20;UBERON:0000200!2.28e-15!6;UBERON:0001869!4.71e-15!32;UBERON:0002619!3.27e-14!22;UBERON:0001893!4.28e-14!34;UBERON:0000956!1.93e-12!25;UBERON:0000203!1.93e-12!25;UBERON:0000473!9.21e-12!8;UBERON:0002791!1.08e-11!33;UBERON:0002780!1.85e-11!41;UBERON:0001890!1.85e-11!41;UBERON:0006240!1.85e-11!41;UBERON:0002020!2.56e-11!34;UBERON:0003528!2.56e-11!34;UBERON:0003080!3.75e-11!42;UBERON:0001872!1.29e-10!5;UBERON:0003135!1.39e-08!11;UBERON:0002771!2.19e-08!3;UBERON:0001049!7.86e-08!57;UBERON:0005068!7.86e-08!57;UBERON:0006241!7.86e-08!57;UBERON:0007135!7.86e-08!57;UBERON:0002616!1.63e-07!59;UBERON:0000955!1.79e-07!69;UBERON:0006238!1.79e-07!69;UBERON:0001017!2.95e-07!82;UBERON:0007190!3.20e-07!1;UBERON:0003056!3.22e-07!61;UBERON:0001282!3.40e-07!1;UBERON:0009842!3.40e-07!1;UBERON:0003704!3.40e-07!1;UBERON:0001171!3.40e-07!1;UBERON:0001172!3.40e-07!1;UBERON:0002581!5.14e-07!1;UBERON:0001874!7.29e-07!1;UBERON:0005743!7.90e-07!86;UBERON:0001871!9.21e-07!7 | |ontology_enrichment_uberon=UBERON:0001950!1.13e-15!20;UBERON:0000200!2.28e-15!6;UBERON:0001869!4.71e-15!32;UBERON:0002619!3.27e-14!22;UBERON:0001893!4.28e-14!34;UBERON:0000956!1.93e-12!25;UBERON:0000203!1.93e-12!25;UBERON:0000473!9.21e-12!8;UBERON:0002791!1.08e-11!33;UBERON:0002780!1.85e-11!41;UBERON:0001890!1.85e-11!41;UBERON:0006240!1.85e-11!41;UBERON:0002020!2.56e-11!34;UBERON:0003528!2.56e-11!34;UBERON:0003080!3.75e-11!42;UBERON:0001872!1.29e-10!5;UBERON:0003135!1.39e-08!11;UBERON:0002771!2.19e-08!3;UBERON:0001049!7.86e-08!57;UBERON:0005068!7.86e-08!57;UBERON:0006241!7.86e-08!57;UBERON:0007135!7.86e-08!57;UBERON:0002616!1.63e-07!59;UBERON:0000955!1.79e-07!69;UBERON:0006238!1.79e-07!69;UBERON:0001017!2.95e-07!82;UBERON:0007190!3.20e-07!1;UBERON:0003056!3.22e-07!61;UBERON:0001282!3.40e-07!1;UBERON:0009842!3.40e-07!1;UBERON:0003704!3.40e-07!1;UBERON:0001171!3.40e-07!1;UBERON:0001172!3.40e-07!1;UBERON:0002581!5.14e-07!1;UBERON:0001874!7.29e-07!1;UBERON:0005743!7.90e-07!86;UBERON:0001871!9.21e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.90e-12;2!UBERON:0002173;2.90e-12;2!UBERON:0002186;2.90e-12;2!UBERON:0002110;1.04e-08;3!UBERON:0004821;1.30e-08;3!UBERON:0007499;1.30e-08;3!UBERON:0003215;1.30e-08;3!UBERON:0010368;1.30e-08;3!UBERON:0009911;1.30e-08;3!UBERON:0002299;1.30e-08;3!UBERON:0006524;1.30e-08;3!UBERON:0008874;1.30e-08;3!UBERON:0002169;1.30e-08;3!UBERON:0004894;1.30e-08;3!UBERON:0009856;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.59e-12,2;UBERON:0002173,2.59e-12,2;UBERON:0002186,2.59e-12,2;UBERON:0002110,1.04e-08,3;UBERON:0006242,1.04e-08,3;UBERON:0004821,1.21e-08,3;UBERON:0003215,1.21e-08,3;UBERON:0010368,1.21e-08,3;UBERON:0009911,1.21e-08,3;UBERON:0002299,1.21e-08,3;UBERON:0006524,1.21e-08,3;UBERON:0008874,1.21e-08,3;UBERON:0002169,1.21e-08,3;UBERON:0004894,1.21e-08,3 | |||
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|short_description=p@chr18:35250432..35250444,+ | |short_description=p@chr18:35250432..35250444,+ | ||
}} | }} |
Latest revision as of 00:45, 26 July 2015
Short description: | p@chr18:35250432..35250444, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:35250432..35250444, + |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.85e-12 | 2 |
epithelial cell of gall bladder | 2.07e-12 | 2 |
pneumocyte | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.59e-12 | 2 |
alveolar duct | 2.59e-12 | 2 |
bronchiole | 2.59e-12 | 2 |
gallbladder | 1.04e-08 | 3 |
gall bladder primordium | 1.04e-08 | 3 |
pulmonary alveolus epithelium | 1.21e-08 | 3 |
alveolus | 1.21e-08 | 3 |
pulmonary lobule | 1.21e-08 | 3 |
lobule | 1.21e-08 | 3 |
alveolus of lung | 1.21e-08 | 3 |
alveolar system | 1.21e-08 | 3 |
pulmonary acinus | 1.21e-08 | 3 |
alveolar sac | 1.21e-08 | 3 |
alveolar wall | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 6.40e-23 | 1 |
myeloma | 6.40e-23 | 1 |
bronchus cancer | 1.15e-13 | 7 |
bronchogenic carcinoma | 1.15e-13 | 7 |
lung adenocarcinoma | 2.59e-12 | 2 |
lung carcinoma | 7.58e-11 | 9 |
carcinoma | 1.65e-07 | 106 |
cell type cancer | 1.95e-07 | 143 |
gastrointestinal system cancer | 2.68e-07 | 14 |
cancer | 2.69e-07 | 235 |
disease of cellular proliferation | 3.89e-07 | 239 |
lung small cell carcinoma | 6.50e-07 | 4 |
lung cancer | 7.20e-07 | 15 |