FFCP PHASE1:Hg19::chr17:42988700..42988738,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt=P14136 | |UniProt=P14136 | ||
|association_with_transcript=-22bp_to_M26638_5end | |association_with_transcript=-22bp_to_M26638_5end | ||
|cluster_id=chr17:42988700..42988738,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_3_at_GFAP_5end | |description=CAGE_peak_3_at_GFAP_5end | ||
|id=chr17:42988700..42988738,- | |id=chr17:42988700..42988738,- | ||
|ontology_enrichment_celltype=CL:0000128!6.83e-08!7;CL:0000126!6.83e-08!7;CL:0000127!6.83e-08!7;CL:0002453!6.83e-08!7;CL:0002605!8.61e-08!3 | |ontology_enrichment_celltype=CL:0000128!6.83e-08!7;CL:0000126!6.83e-08!7;CL:0000127!6.83e-08!7;CL:0002453!6.83e-08!7;CL:0002605!8.61e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002605;3.78e-11;3!CL:0002319;3.26e-08;25!CL:0000128;5.10e-08;7!CL:0000126;5.10e-08;7!CL:0000127;5.10e-08;7!CL:0000047;3.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.65e-11,3;CL:0000047,9.88e-10,8;CL:0002319,3.13e-08,25;CL:0000128,4.96e-08,7;CL:0000126,4.96e-08,7;CL:0000127,4.96e-08,7;CL:0002453,4.96e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.30e-20;82!UBERON:0006241;4.80e-12;3!UBERON:0003057;4.80e-12;3!UBERON:0010122;4.95e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.67e-97!57;UBERON:0005068!3.67e-97!57;UBERON:0006241!3.67e-97!57;UBERON:0007135!3.67e-97!57;UBERON:0001017!1.40e-91!82;UBERON:0005743!1.40e-86!86;UBERON:0002616!2.79e-81!59;UBERON:0000073!6.73e-80!94;UBERON:0001016!6.73e-80!94;UBERON:0000955!8.99e-76!69;UBERON:0006238!8.99e-76!69;UBERON:0002780!7.27e-75!41;UBERON:0001890!7.27e-75!41;UBERON:0006240!7.27e-75!41;UBERON:0003080!7.98e-73!42;UBERON:0003075!7.90e-67!86;UBERON:0007284!7.90e-67!86;UBERON:0002020!9.10e-66!34;UBERON:0003528!9.10e-66!34;UBERON:0001893!2.50e-65!34;UBERON:0002791!1.94e-63!33;UBERON:0002346!3.76e-63!90;UBERON:0001869!6.58e-61!32;UBERON:0007023!4.97e-50!115;UBERON:0003056!5.27e-49!61;UBERON:0000956!6.66e-47!25;UBERON:0000203!6.66e-47!25;UBERON:0000033!2.74e-46!123;UBERON:0004121!8.63e-46!169;UBERON:0000153!4.50e-45!129;UBERON:0007811!4.50e-45!129;UBERON:0000924!2.60e-44!173;UBERON:0006601!2.60e-44!173;UBERON:0002619!1.10e-40!22;UBERON:0001950!2.04e-36!20;UBERON:0003076!5.01e-24!15;UBERON:0003057!5.01e-24!15;UBERON:0000025!1.10e-20!194;UBERON:0002308!6.07e-20!9;UBERON:0000125!6.07e-20!9;UBERON:0004732!1.04e-19!13;UBERON:0002420!1.65e-19!9;UBERON:0007245!1.65e-19!9;UBERON:0010009!1.65e-19!9;UBERON:0010011!1.65e-19!9;UBERON:0000454!1.65e-19!9;UBERON:0004733!1.35e-17!12;UBERON:0002028!1.35e-17!12;UBERON:0007277!1.35e-17!12;UBERON:0004111!5.49e-16!241;UBERON:0009663!1.31e-15!7;UBERON:0000477!1.71e-14!286;UBERON:0002298!2.81e-14!8;UBERON:0000200!3.84e-13!6;UBERON:0000475!4.44e-13!365;UBERON:0001871!5.63e-13!7;UBERON:0000064!5.19e-12!219;UBERON:0000349!1.46e-11!5;UBERON:0000483!1.60e-11!309;UBERON:0002680!1.72e-11!9;UBERON:0001895!1.72e-11!9;UBERON:0010092!1.72e-11!9;UBERON:0000119!2.92e-11!312;UBERON:0001894!8.67e-11!7;UBERON:0006222!8.67e-11!7;UBERON:0001872!1.17e-10!5;UBERON:0002021!1.22e-10!5;UBERON:0000369!2.09e-09!4;UBERON:0002435!2.09e-09!4;UBERON:0000204!2.09e-09!4;UBERON:0010082!2.09e-09!4;UBERON:0002240!2.30e-08!3;UBERON:0006331!3.32e-08!3;UBERON:0001896!3.48e-08!3;UBERON:0005290!3.48e-08!3;UBERON:0010096!3.48e-08!3;UBERON:0005174!5.72e-08!5;UBERON:0001137!5.72e-08!5;UBERON:0000988!7.70e-08!3;UBERON:0005383!1.15e-07!3;UBERON:0005382!1.15e-07!3;UBERON:0002771!1.49e-07!3;UBERON:0000922!6.86e-07!612;UBERON:0000923!9.12e-07!604;UBERON:0005291!9.12e-07!604;UBERON:0006598!9.12e-07!604;UBERON:0002532!9.12e-07!604;UBERON:0000467!9.23e-07!625 | |ontology_enrichment_uberon=UBERON:0001049!3.67e-97!57;UBERON:0005068!3.67e-97!57;UBERON:0006241!3.67e-97!57;UBERON:0007135!3.67e-97!57;UBERON:0001017!1.40e-91!82;UBERON:0005743!1.40e-86!86;UBERON:0002616!2.79e-81!59;UBERON:0000073!6.73e-80!94;UBERON:0001016!6.73e-80!94;UBERON:0000955!8.99e-76!69;UBERON:0006238!8.99e-76!69;UBERON:0002780!7.27e-75!41;UBERON:0001890!7.27e-75!41;UBERON:0006240!7.27e-75!41;UBERON:0003080!7.98e-73!42;UBERON:0003075!7.90e-67!86;UBERON:0007284!7.90e-67!86;UBERON:0002020!9.10e-66!34;UBERON:0003528!9.10e-66!34;UBERON:0001893!2.50e-65!34;UBERON:0002791!1.94e-63!33;UBERON:0002346!3.76e-63!90;UBERON:0001869!6.58e-61!32;UBERON:0007023!4.97e-50!115;UBERON:0003056!5.27e-49!61;UBERON:0000956!6.66e-47!25;UBERON:0000203!6.66e-47!25;UBERON:0000033!2.74e-46!123;UBERON:0004121!8.63e-46!169;UBERON:0000153!4.50e-45!129;UBERON:0007811!4.50e-45!129;UBERON:0000924!2.60e-44!173;UBERON:0006601!2.60e-44!173;UBERON:0002619!1.10e-40!22;UBERON:0001950!2.04e-36!20;UBERON:0003076!5.01e-24!15;UBERON:0003057!5.01e-24!15;UBERON:0000025!1.10e-20!194;UBERON:0002308!6.07e-20!9;UBERON:0000125!6.07e-20!9;UBERON:0004732!1.04e-19!13;UBERON:0002420!1.65e-19!9;UBERON:0007245!1.65e-19!9;UBERON:0010009!1.65e-19!9;UBERON:0010011!1.65e-19!9;UBERON:0000454!1.65e-19!9;UBERON:0004733!1.35e-17!12;UBERON:0002028!1.35e-17!12;UBERON:0007277!1.35e-17!12;UBERON:0004111!5.49e-16!241;UBERON:0009663!1.31e-15!7;UBERON:0000477!1.71e-14!286;UBERON:0002298!2.81e-14!8;UBERON:0000200!3.84e-13!6;UBERON:0000475!4.44e-13!365;UBERON:0001871!5.63e-13!7;UBERON:0000064!5.19e-12!219;UBERON:0000349!1.46e-11!5;UBERON:0000483!1.60e-11!309;UBERON:0002680!1.72e-11!9;UBERON:0001895!1.72e-11!9;UBERON:0010092!1.72e-11!9;UBERON:0000119!2.92e-11!312;UBERON:0001894!8.67e-11!7;UBERON:0006222!8.67e-11!7;UBERON:0001872!1.17e-10!5;UBERON:0002021!1.22e-10!5;UBERON:0000369!2.09e-09!4;UBERON:0002435!2.09e-09!4;UBERON:0000204!2.09e-09!4;UBERON:0010082!2.09e-09!4;UBERON:0002240!2.30e-08!3;UBERON:0006331!3.32e-08!3;UBERON:0001896!3.48e-08!3;UBERON:0005290!3.48e-08!3;UBERON:0010096!3.48e-08!3;UBERON:0005174!5.72e-08!5;UBERON:0001137!5.72e-08!5;UBERON:0000988!7.70e-08!3;UBERON:0005383!1.15e-07!3;UBERON:0005382!1.15e-07!3;UBERON:0002771!1.49e-07!3;UBERON:0000922!6.86e-07!612;UBERON:0000923!9.12e-07!604;UBERON:0005291!9.12e-07!604;UBERON:0006598!9.12e-07!604;UBERON:0002532!9.12e-07!604;UBERON:0000467!9.23e-07!625 | ||
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| ||
|short_description=p3@GFAP | |short_description=p3@GFAP | ||
}} | }} |
Latest revision as of 23:38, 24 September 2015
Short description: | p3@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GFAP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -22bp_to_M26638_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | P14136 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.65e-11 | 3 |
neuronal stem cell | 9.88e-10 | 8 |
neural cell | 3.13e-08 | 25 |
oligodendrocyte | 4.96e-08 | 7 |
macroglial cell | 4.96e-08 | 7 |
astrocyte | 4.96e-08 | 7 |
oligodendrocyte precursor cell | 4.96e-08 | 7 |