FFCP PHASE1:Hg19::chr17:41623692..41623715,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2118 | |EntrezGene=2118 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3493 | |HGNC=3493 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z5J3 | |UniProt=B7Z5J3 | ||
|association_with_transcript=-1bp_to_ENST00000545954_5end | |association_with_transcript=-1bp_to_ENST00000545954_5end | ||
|cluster_id=chr17:41623692..41623715,- | |||
|coexpression_cluster_id=C3635 | |coexpression_cluster_id=C3635 | ||
|description=CAGE_peak_1_at_ETV4_5end | |description=CAGE_peak_1_at_ETV4_5end | ||
|id=chr17:41623692..41623715,- | |id=chr17:41623692..41623715,- | ||
|ontology_enrichment_celltype=CL:0000066!1.79e-38!254;CL:0002321!1.65e-25!248;CL:0000220!1.01e-24!246;CL:0000548!2.06e-11!679;CL:0000004!2.06e-11!679;CL:0000255!2.06e-11!679;CL:0000012!1.21e-10!682;CL:0000223!1.34e-09!59;CL:0000076!4.72e-09!62;CL:0000221!6.51e-08!71;CL:0002076!9.31e-08!43;CL:0000222!1.38e-07!119;CL:0000055!7.03e-07!180;CL:0002078!8.00e-07!44 | |ontology_enrichment_celltype=CL:0000066!1.79e-38!254;CL:0002321!1.65e-25!248;CL:0000220!1.01e-24!246;CL:0000548!2.06e-11!679;CL:0000004!2.06e-11!679;CL:0000255!2.06e-11!679;CL:0000012!1.21e-10!682;CL:0000223!1.34e-09!59;CL:0000076!4.72e-09!62;CL:0000221!6.51e-08!71;CL:0002076!9.31e-08!43;CL:0000222!1.38e-07!119;CL:0000055!7.03e-07!180;CL:0002078!8.00e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:1000449;7.61e-07;15!CL:0000071;9.36e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.35e-39,253;CL:0002321,4.04e-25,250;CL:0000223,1.96e-10,58;CL:0000076,8.14e-09,63;CL:0002076,3.10e-08,42;CL:0002078,2.18e-07,45;CL:0000221,2.23e-07,72;CL:0000222,2.93e-07,121;CL:0000115,5.92e-07,36;CL:0000071,8.87e-07,18;CL:0002546,8.87e-07,18;CL:1000449,8.94e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;9.36e-07;18 | |||
|ontology_enrichment_disease=DOID:162!3.24e-16!235;DOID:14566!2.76e-15!239;DOID:305!7.74e-14!106;DOID:0050687!5.67e-13!143;DOID:0050686!4.20e-07!137 | |ontology_enrichment_disease=DOID:162!3.24e-16!235;DOID:14566!2.76e-15!239;DOID:305!7.74e-14!106;DOID:0050687!5.67e-13!143;DOID:0050686!4.20e-07!137 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.88e-16,235;DOID:14566,1.21e-15,239;DOID:305,1.03e-13,106;DOID:0050687,5.04e-13,143;DOID:0050686,3.39e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0000119!2.06e-13!312;UBERON:0000483!1.50e-12!309;UBERON:0003104!5.93e-12!238;UBERON:0009142!5.93e-12!238;UBERON:0003914!2.27e-11!118;UBERON:0000481!3.55e-11!347;UBERON:0004119!1.83e-10!169;UBERON:0000925!1.83e-10!169;UBERON:0006595!1.83e-10!169;UBERON:0000490!2.04e-09!138;UBERON:0002100!2.35e-09!216;UBERON:0001048!2.42e-09!168;UBERON:0000466!4.69e-09!126;UBERON:0001007!7.59e-09!155;UBERON:0001555!7.59e-09!155;UBERON:0007026!7.59e-09!155;UBERON:0005256!1.75e-08!143;UBERON:0005177!1.96e-08!107;UBERON:0000077!3.19e-08!130;UBERON:0000475!3.36e-08!365;UBERON:0000477!1.31e-07!286;UBERON:0000487!2.04e-07!22;UBERON:0000464!2.24e-07!104;UBERON:0004111!3.35e-07!241;UBERON:0002049!5.35e-07!79;UBERON:0007798!5.35e-07!79;UBERON:0005911!6.68e-07!82 | |ontology_enrichment_uberon=UBERON:0000119!2.06e-13!312;UBERON:0000483!1.50e-12!309;UBERON:0003104!5.93e-12!238;UBERON:0009142!5.93e-12!238;UBERON:0003914!2.27e-11!118;UBERON:0000481!3.55e-11!347;UBERON:0004119!1.83e-10!169;UBERON:0000925!1.83e-10!169;UBERON:0006595!1.83e-10!169;UBERON:0000490!2.04e-09!138;UBERON:0002100!2.35e-09!216;UBERON:0001048!2.42e-09!168;UBERON:0000466!4.69e-09!126;UBERON:0001007!7.59e-09!155;UBERON:0001555!7.59e-09!155;UBERON:0007026!7.59e-09!155;UBERON:0005256!1.75e-08!143;UBERON:0005177!1.96e-08!107;UBERON:0000077!3.19e-08!130;UBERON:0000475!3.36e-08!365;UBERON:0000477!1.31e-07!286;UBERON:0000487!2.04e-07!22;UBERON:0000464!2.24e-07!104;UBERON:0004111!3.35e-07!241;UBERON:0002049!5.35e-07!79;UBERON:0007798!5.35e-07!79;UBERON:0005911!6.68e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0000490;9.10e-08;33!UBERON:0000487;1.45e-07;22!UBERON:0006555;7.61e-07;15!UBERON:0004819;7.61e-07;15!UBERON:0001285;7.61e-07;15!UBERON:0007684;7.61e-07;15!UBERON:0004638;9.36e-07;18!UBERON:0001986;9.36e-07;18!UBERON:0004852;9.36e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.12e-11,117;UBERON:0000119,6.50e-10,309;UBERON:0000490,9.01e-10,148;UBERON:0005177,2.95e-09,101;UBERON:0000483,3.62e-09,306;UBERON:0002100,1.98e-08,199;UBERON:0004119,8.35e-08,160;UBERON:0000925,8.35e-08,160;UBERON:0006595,8.35e-08,160;UBERON:0000487,1.26e-07,22;UBERON:0004638,8.87e-07,18;UBERON:0001986,8.87e-07,18;UBERON:0004852,8.87e-07,18;UBERON:0004211,8.94e-07,15;UBERON:0009773,8.94e-07,15;UBERON:0001231,8.94e-07,15;UBERON:0001285,8.94e-07,15;UBERON:0007684,8.94e-07,15;UBERON:0004208,8.94e-07,15 | |||
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| ||
|short_description=p1@ETV4 | |short_description=p1@ETV4 | ||
}} | }} |
Latest revision as of 18:34, 24 September 2015
Short description: | p1@ETV4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ETV4_5end |
Coexpression cluster: | C3635_testicular_hepatoblastoma_hepatocellular_lung_gastric_prostate_Trabecular |
Association with transcript: | -1bp_to_ENST00000545954_5end |
EntrezGene: | ETV4 |
HGNC: | 3493 |
UniProt: | B7Z5J3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.35e-39 | 253 |
embryonic cell | 4.04e-25 | 250 |
endodermal cell | 1.96e-10 | 58 |
squamous epithelial cell | 8.14e-09 | 63 |
endo-epithelial cell | 3.10e-08 | 42 |
meso-epithelial cell | 2.18e-07 | 45 |
ectodermal cell | 2.23e-07 | 72 |
mesodermal cell | 2.93e-07 | 121 |
endothelial cell | 5.92e-07 | 36 |
blood vessel endothelial cell | 8.87e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.87e-07 | 18 |
epithelial cell of nephron | 8.94e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 2.12e-11 | 117 |
cell layer | 6.50e-10 | 309 |
unilaminar epithelium | 9.01e-10 | 148 |
trunk region element | 2.95e-09 | 101 |
epithelium | 3.62e-09 | 306 |
trunk | 1.98e-08 | 199 |
endoderm-derived structure | 8.35e-08 | 160 |
endoderm | 8.35e-08 | 160 |
presumptive endoderm | 8.35e-08 | 160 |
simple squamous epithelium | 1.26e-07 | 22 |
blood vessel endothelium | 8.87e-07 | 18 |
endothelium | 8.87e-07 | 18 |
cardiovascular system endothelium | 8.87e-07 | 18 |
nephron epithelium | 8.94e-07 | 15 |
renal tubule | 8.94e-07 | 15 |
nephron tubule | 8.94e-07 | 15 |
nephron | 8.94e-07 | 15 |
uriniferous tubule | 8.94e-07 | 15 |
nephrogenic mesenchyme | 8.94e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.88e-16 | 235 |
disease of cellular proliferation | 1.21e-15 | 239 |
carcinoma | 1.03e-13 | 106 |
cell type cancer | 5.04e-13 | 143 |
organ system cancer | 3.39e-07 | 137 |