FFCP PHASE1:Hg19::chr17:38859668..38859679,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=192666 | |EntrezGene=192666 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18527 | |HGNC=18527 | ||
|TSSclassifier=strong | |||
|UniProt=Q2M2I5 | |UniProt=Q2M2I5 | ||
|association_with_transcript=297bp_to_BC111964,BC111968_5end | |association_with_transcript=297bp_to_BC111964,BC111968_5end | ||
|cluster_id=chr17:38859668..38859679,- | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_4_at_KRT24_5end | |description=CAGE_peak_4_at_KRT24_5end | ||
|id=chr17:38859668..38859679,- | |id=chr17:38859668..38859679,- | ||
|ontology_enrichment_celltype=CL:0002541!6.51e-34!3;CL:0002623!1.50e-33!3;CL:0002537!4.92e-21!5;CL:0000622!1.34e-20!5;CL:0000154!2.38e-17!6;CL:0000150!6.51e-12!9;CL:0000349!1.30e-09!3;CL:0002577!1.30e-09!3 | |ontology_enrichment_celltype=CL:0002541!6.51e-34!3;CL:0002623!1.50e-33!3;CL:0002537!4.92e-21!5;CL:0000622!1.34e-20!5;CL:0000154!2.38e-17!6;CL:0000150!6.51e-12!9;CL:0000349!1.30e-09!3;CL:0002577!1.30e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.83e-42;19!CL:0002537;1.81e-40;5!CL:0002541;1.03e-17;3!CL:0002577;1.03e-17;3!CL:0000134;3.79e-07;55!CL:0000723;5.85e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.83e-42,19;CL:0002537,1.81e-40,5;CL:0002541,9.46e-18,3;CL:0002577,1.12e-17,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.04e-63!14;UBERON:0000158!2.04e-63!14;UBERON:0003124!1.88e-56!7;UBERON:0000478!3.60e-37!24;UBERON:0000476!6.51e-34!3;UBERON:0000920!6.51e-34!3;UBERON:0001987!1.62e-25!4;UBERON:0004340!1.62e-25!4;UBERON:0001044!2.38e-17!6;UBERON:0003293!2.38e-17!6;UBERON:0003294!2.38e-17!6;UBERON:0010047!2.38e-17!6;UBERON:0000167!2.38e-17!6;UBERON:0004923!8.45e-16!57;UBERON:0000305!2.47e-15!7;UBERON:0004871!1.51e-13!8;UBERON:0003408!8.06e-11!10 | |ontology_enrichment_uberon=UBERON:0005631!2.04e-63!14;UBERON:0000158!2.04e-63!14;UBERON:0003124!1.88e-56!7;UBERON:0000478!3.60e-37!24;UBERON:0000476!6.51e-34!3;UBERON:0000920!6.51e-34!3;UBERON:0001987!1.62e-25!4;UBERON:0004340!1.62e-25!4;UBERON:0001044!2.38e-17!6;UBERON:0003293!2.38e-17!6;UBERON:0003294!2.38e-17!6;UBERON:0010047!2.38e-17!6;UBERON:0000167!2.38e-17!6;UBERON:0004923!8.45e-16!57;UBERON:0000305!2.47e-15!7;UBERON:0004871!1.51e-13!8;UBERON:0003408!8.06e-11!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.50e-45;10!UBERON:0000158;4.50e-45;10!UBERON:0000478;1.33e-33;24!UBERON:0000305;2.74e-29;7!UBERON:0003124;1.03e-17;3!UBERON:0000920;1.03e-17;3!UBERON:0001987;1.21e-13;4!UBERON:0004923;2.60e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.13e-57,14;UBERON:0000158,9.13e-57,14;UBERON:0000478,1.33e-33,24;UBERON:0000305,2.74e-29,7;UBERON:0003124,4.86e-29,7;UBERON:0004871,8.65e-26,8;UBERON:0000920,9.46e-18,3;UBERON:0001987,1.29e-13,4;UBERON:0004340,1.29e-13,4;UBERON:0004923,7.62e-13,66 | |||
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|short_description=p4@KRT24 | |short_description=p4@KRT24 | ||
}} | }} |
Latest revision as of 03:16, 20 September 2015
Short description: | p4@KRT24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KRT24_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 297bp_to_BC111964, BC111968_5end |
EntrezGene: | KRT24 |
HGNC: | 18527 |
UniProt: | Q2M2I5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.83e-42 | 19 |
amnion mesenchymal stem cell | 1.81e-40 | 5 |
chorionic membrane mesenchymal stem cell | 9.46e-18 | 3 |
placental epithelial cell | 1.12e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.13e-57 | 14 |
membranous layer | 9.13e-57 | 14 |
extraembryonic structure | 1.33e-33 | 24 |
amnion | 2.74e-29 | 7 |
chorion | 4.86e-29 | 7 |
somatic layer of lateral plate mesoderm | 8.65e-26 | 8 |
egg chorion | 9.46e-18 | 3 |
placenta | 1.29e-13 | 4 |
allantois | 1.29e-13 | 4 |
organ component layer | 7.62e-13 | 66 |