FFCP PHASE1:Hg19::chr17:28661068..28661080,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388364 | |EntrezGene=388364 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32431 | |HGNC=32431 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UXZ0,F5H477 | |UniProt=Q6UXZ0,F5H477 | ||
|association_with_transcript=-3bp_to_ENST00000328886,ENST00000538566,NM_206832,uc002hfa.1,uc010csh.1_5end | |association_with_transcript=-3bp_to_ENST00000328886,ENST00000538566,NM_206832,uc002hfa.1,uc010csh.1_5end | ||
|cluster_id=chr17:28661068..28661080,- | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_1_at_TMIGD1_5end | |description=CAGE_peak_1_at_TMIGD1_5end | ||
|id=chr17:28661068..28661080,- | |id=chr17:28661068..28661080,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:178!2.11e-14!1;DOID:326!2.11e-14!1;DOID:3978!2.11e-14!1;DOID:3394!2.11e-14!1;DOID:5844!2.11e-14!1;DOID:114!7.52e-08!2 | |ontology_enrichment_disease=DOID:178!2.11e-14!1;DOID:326!2.11e-14!1;DOID:3978!2.11e-14!1;DOID:3394!2.11e-14!1;DOID:5844!2.11e-14!1;DOID:114!7.52e-08!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!1.92e-43!11;UBERON:0000160!1.03e-37!27;UBERON:0005409!3.69e-29!35;UBERON:0004907!1.20e-24!5;UBERON:0001155!3.93e-24!9;UBERON:0001154!1.23e-14!1;UBERON:0001153!1.23e-14!1;UBERON:0007029!1.41e-14!1;UBERON:0001052!2.11e-14!4;UBERON:0002363!3.15e-14!1;UBERON:0007647!3.15e-14!1;UBERON:0010115!3.15e-14!1;UBERON:0001046!1.86e-11!19;UBERON:0004921!3.80e-09!129;UBERON:0004185!3.80e-09!129;UBERON:0002360!9.19e-08!2;UBERON:0000094!9.19e-08!2;UBERON:0007645!9.19e-08!2;UBERON:0001007!2.03e-07!155;UBERON:0001555!2.03e-07!155;UBERON:0007026!2.03e-07!155 | |ontology_enrichment_uberon=UBERON:0000059!1.92e-43!11;UBERON:0000160!1.03e-37!27;UBERON:0005409!3.69e-29!35;UBERON:0004907!1.20e-24!5;UBERON:0001155!3.93e-24!9;UBERON:0001154!1.23e-14!1;UBERON:0001153!1.23e-14!1;UBERON:0007029!1.41e-14!1;UBERON:0001052!2.11e-14!4;UBERON:0002363!3.15e-14!1;UBERON:0007647!3.15e-14!1;UBERON:0010115!3.15e-14!1;UBERON:0001046!1.86e-11!19;UBERON:0004921!3.80e-09!129;UBERON:0004185!3.80e-09!129;UBERON:0002360!9.19e-08!2;UBERON:0000094!9.19e-08!2;UBERON:0007645!9.19e-08!2;UBERON:0001007!2.03e-07!155;UBERON:0001555!2.03e-07!155;UBERON:0007026!2.03e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;4.53e-55;17!UBERON:0005409;2.60e-43;22!UBERON:0000059;6.65e-33;11!UBERON:0002108;1.23e-32;4!UBERON:0004921;1.10e-26;33!UBERON:0001155;1.41e-18;9!UBERON:0001052;3.60e-11;4!UBERON:0004907;3.35e-09;5!UBERON:0001555;9.78e-09;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.53e-55,17;UBERON:0005409,2.01e-38,25;UBERON:0000059,6.65e-33,11;UBERON:0002108,1.23e-32,4;UBERON:0001155,1.35e-18,9;UBERON:0001052,3.79e-11,4;UBERON:0004907,3.49e-09,5;UBERON:0004921,6.01e-09,118;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160 | |||
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|short_description=p1@TMIGD1 | |short_description=p1@TMIGD1 | ||
}} | }} |
Latest revision as of 09:53, 19 September 2015
Short description: | p1@TMIGD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMIGD1_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -3bp_to_ENST00000328886, ENST00000538566, NM_206832, uc002hfa.1, uc010csh.1_5end |
EntrezGene: | TMIGD1 |
HGNC: | 32431 |
UniProt: | Q6UXZ0F5H477 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 4.53e-55 | 17 |
gastrointestinal system | 2.01e-38 | 25 |
large intestine | 6.65e-33 | 11 |
small intestine | 1.23e-32 | 4 |
colon | 1.35e-18 | 9 |
rectum | 3.79e-11 | 4 |
lower digestive tract | 3.49e-09 | 5 |
subdivision of digestive tract | 6.01e-09 | 118 |
digestive system | 2.16e-07 | 145 |
digestive tract | 2.16e-07 | 145 |
primitive gut | 2.16e-07 | 145 |
endoderm-derived structure | 9.48e-07 | 160 |
endoderm | 9.48e-07 | 160 |
presumptive endoderm | 9.48e-07 | 160 |