FFCP PHASE1:Hg19::chr16:735282..735294,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:735282..735294,+ | |||
|coexpression_cluster_id=C184 | |coexpression_cluster_id=C184 | ||
|description=CAGE_peak_at_chr16:735282..735294,+ | |description=CAGE_peak_at_chr16:735282..735294,+ | ||
|id=chr16:735282..735294,+ | |id=chr16:735282..735294,+ | ||
|ontology_enrichment_celltype=CL:0000167!7.40e-11!1;CL:0000164!7.40e-11!1;CL:0000502!7.40e-11!1;CL:0000172!7.40e-11!1;CL:0000173!7.40e-11!1;CL:0002351!7.40e-11!1;CL:0002553!9.84e-11!1;CL:0000819!2.50e-10!1;CL:0002563!6.54e-10!4 | |ontology_enrichment_celltype=CL:0000167!7.40e-11!1;CL:0000164!7.40e-11!1;CL:0000502!7.40e-11!1;CL:0000172!7.40e-11!1;CL:0000173!7.40e-11!1;CL:0002351!7.40e-11!1;CL:0002553!9.84e-11!1;CL:0000819!2.50e-10!1;CL:0002563!6.54e-10!4 | ||
|ontology_enrichment_celltype_v019=CL:0000167;5.11e-17;1!CL:0000164;5.11e-17;1!CL:0000502;5.11e-17;1!CL:0000172;5.11e-17;1!CL:0000173;5.11e-17;1!CL:0002553;8.19e-17;1!CL:0000123;5.28e-09;2!CL:0002535;5.28e-09;2!CL:0000242;5.28e-09;2!CL:1000415;7.21e-09;2!CL:0000082;6.94e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,5.53e-17,1;CL:0000164,5.53e-17,1;CL:0000502,5.53e-17,1;CL:0000172,5.53e-17,1;CL:0000173,5.53e-17,1;CL:0002351,5.53e-17,1;CL:0002553,8.86e-17,1;CL:0000066,4.34e-09,253;CL:0002535,5.08e-09,2;CL:0000242,5.49e-09,2;CL:1000415,8.74e-09,2;CL:0000082,6.78e-08,19 | |||
|ontology_enrichment_development_v019=CL:0002351;5.11e-17;1 | |||
|ontology_enrichment_disease=DOID:305!1.77e-12!106;DOID:4430!7.40e-11!1;DOID:3119!8.86e-11!14;DOID:0060073!2.50e-10!1;DOID:8675!2.50e-10!1;DOID:0050687!2.89e-10!143;DOID:162!2.87e-07!235;DOID:14566!4.64e-07!239 | |ontology_enrichment_disease=DOID:305!1.77e-12!106;DOID:4430!7.40e-11!1;DOID:3119!8.86e-11!14;DOID:0060073!2.50e-10!1;DOID:8675!2.50e-10!1;DOID:0050687!2.89e-10!143;DOID:162!2.87e-07!235;DOID:14566!4.64e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:4430;5.11e-17;1!DOID:3119;1.59e-10;14!DOID:1324;7.67e-10;15!DOID:305;8.87e-10;106!DOID:1325;1.02e-09;7!DOID:3904;1.02e-09;7!DOID:0050615;2.91e-09;16!DOID:3910;7.21e-09;2!DOID:3493;7.21e-09;2!DOID:3905;9.36e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,5.53e-17,1;DOID:305,2.01e-16,106;DOID:0050687,2.44e-14,143;DOID:3119,1.57e-10,14;DOID:1324,7.44e-10,15;DOID:1325,9.52e-10,7;DOID:3904,9.52e-10,7;DOID:0050615,2.83e-09,16;DOID:3910,6.42e-09,2;DOID:3493,7.49e-09,2;DOID:162,3.16e-08,235;DOID:14566,4.97e-08,239;DOID:3905,8.90e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0001242!6.54e-10!4;UBERON:0001262!6.54e-10!4;UBERON:0004786!6.54e-10!4;UBERON:0004808!6.54e-10!4;UBERON:0001277!6.54e-10!4;UBERON:0005153!1.97e-08!37;UBERON:0003350!4.22e-08!5;UBERON:0005911!1.10e-07!82;UBERON:0000060!2.47e-07!12;UBERON:0002048!7.09e-07!22;UBERON:0000117!7.09e-07!22;UBERON:0000171!7.09e-07!22;UBERON:0000170!7.09e-07!22;UBERON:0005597!7.09e-07!22;UBERON:0000118!7.09e-07!22 | |ontology_enrichment_uberon=UBERON:0001242!6.54e-10!4;UBERON:0001262!6.54e-10!4;UBERON:0004786!6.54e-10!4;UBERON:0004808!6.54e-10!4;UBERON:0001277!6.54e-10!4;UBERON:0005153!1.97e-08!37;UBERON:0003350!4.22e-08!5;UBERON:0005911!1.10e-07!82;UBERON:0000060!2.47e-07!12;UBERON:0002048!7.09e-07!22;UBERON:0000117!7.09e-07!22;UBERON:0000171!7.09e-07!22;UBERON:0000170!7.09e-07!22;UBERON:0005597!7.09e-07!22;UBERON:0000118!7.09e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;5.28e-09;2!UBERON:0004801;5.28e-09;2!UBERON:0004903;7.21e-09;2!UBERON:0002173;7.21e-09;2!UBERON:0002186;7.21e-09;2!UBERON:0004802;6.94e-08;19!UBERON:0000115;6.94e-08;19!UBERON:0002048;7.03e-07;22!UBERON:0004807;7.03e-07;22!UBERON:0000117;7.03e-07;22!UBERON:0000171;7.03e-07;22!UBERON:0000170;7.03e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,5.08e-09,2;UBERON:0004801,5.08e-09,2;UBERON:0004903,6.42e-09,2;UBERON:0002173,6.42e-09,2;UBERON:0002186,6.42e-09,2;UBERON:0004802,6.78e-08,19;UBERON:0000115,6.78e-08,19;UBERON:0005153,6.57e-07,37;UBERON:0002048,6.89e-07,22;UBERON:0000117,6.89e-07,22;UBERON:0000171,6.89e-07,22;UBERON:0000170,6.89e-07,22;UBERON:0005597,6.89e-07,22;UBERON:0000118,6.89e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47003968731907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77899121781414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2517279311405,1.77977555204936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17330829640882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04334160082733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00285374142735,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27595303699816,0,0,0,0,0,0,4.3769170535501,0,0,0,5.1327366812669,0,0,7.99539403814589,0,7.54164950725203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47003968731907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77899121781414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2517279311405,1.77977555204936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17330829640882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04334160082733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00285374142735,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27595303699816,0,0,0,0,0,0,4.3769170535501,0,0,0,5.1327366812669,0,0,7.99539403814589,0,7.54164950725203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:735282..735294,+ | |short_description=p@chr16:735282..735294,+ | ||
}} | }} |
Latest revision as of 12:15, 25 July 2015
Short description: | p@chr16:735282..735294, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:735282..735294, + |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 5.53e-17 | 1 |
enteroendocrine cell | 5.53e-17 | 1 |
type D enteroendocrine cell | 5.53e-17 | 1 |
somatostatin secreting cell | 5.53e-17 | 1 |
pancreatic D cell | 5.53e-17 | 1 |
progenitor cell of endocrine pancreas | 5.53e-17 | 1 |
lung fibroblast | 8.86e-17 | 1 |
epithelial cell | 4.34e-09 | 253 |
epithelial cell of cervix | 5.08e-09 | 2 |
Merkel cell | 5.49e-09 | 2 |
epithelial cell of gall bladder | 8.74e-09 | 2 |
epithelial cell of lung | 6.78e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 5.08e-09 | 2 |
cervix epithelium | 5.08e-09 | 2 |
bronchoalveolar duct junction | 6.42e-09 | 2 |
alveolar duct | 6.42e-09 | 2 |
bronchiole | 6.42e-09 | 2 |
respiratory tract epithelium | 6.78e-08 | 19 |
lung epithelium | 6.78e-08 | 19 |
epithelial bud | 6.57e-07 | 37 |
lung | 6.89e-07 | 22 |
respiratory tube | 6.89e-07 | 22 |
respiration organ | 6.89e-07 | 22 |
pair of lungs | 6.89e-07 | 22 |
lung primordium | 6.89e-07 | 22 |
lung bud | 6.89e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 5.53e-17 | 1 |
carcinoma | 2.01e-16 | 106 |
cell type cancer | 2.44e-14 | 143 |
gastrointestinal system cancer | 1.57e-10 | 14 |
lung cancer | 7.44e-10 | 15 |
bronchus cancer | 9.52e-10 | 7 |
bronchogenic carcinoma | 9.52e-10 | 7 |
respiratory system cancer | 2.83e-09 | 16 |
lung adenocarcinoma | 6.42e-09 | 2 |
signet ring cell adenocarcinoma | 7.49e-09 | 2 |
cancer | 3.16e-08 | 235 |
disease of cellular proliferation | 4.97e-08 | 239 |
lung carcinoma | 8.90e-08 | 9 |