FFCP PHASE1:Hg19::chr16:55527062..55527078,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4313 | |EntrezGene=4313 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7166 | |HGNC=7166 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_uc002eia.3_5end | |association_with_transcript=11bp_to_uc002eia.3_5end | ||
|cluster_id=chr16:55527062..55527078,+ | |||
|coexpression_cluster_id=C351 | |coexpression_cluster_id=C351 | ||
|description=CAGE_peak_7_at_MMP2_5end | |description=CAGE_peak_7_at_MMP2_5end | ||
|id=chr16:55527062..55527078,+ | |id=chr16:55527062..55527078,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.70e-24!180;CL:0000057!6.35e-17!75;CL:0000680!6.82e-10!57;CL:0000056!6.82e-10!57;CL:0000355!6.82e-10!57;CL:0000048!2.17e-09!430;CL:0002334!4.83e-09!12;CL:0002371!7.15e-09!591;CL:0000723!9.87e-09!436;CL:0000183!1.64e-08!59;CL:0000187!2.02e-08!54;CL:0000034!3.71e-08!444;CL:0000192!3.93e-08!42;CL:0000514!3.93e-08!42;CL:0002620!8.72e-08!23;CL:0000144!3.22e-07!625;CL:0002494!3.55e-07!16;CL:0000393!3.79e-07!60;CL:0000211!3.79e-07!60;CL:0000222!7.24e-07!119 | |ontology_enrichment_celltype=CL:0000055!1.70e-24!180;CL:0000057!6.35e-17!75;CL:0000680!6.82e-10!57;CL:0000056!6.82e-10!57;CL:0000355!6.82e-10!57;CL:0000048!2.17e-09!430;CL:0002334!4.83e-09!12;CL:0002371!7.15e-09!591;CL:0000723!9.87e-09!436;CL:0000183!1.64e-08!59;CL:0000187!2.02e-08!54;CL:0000034!3.71e-08!444;CL:0000192!3.93e-08!42;CL:0000514!3.93e-08!42;CL:0002620!8.72e-08!23;CL:0000144!3.22e-07!625;CL:0002494!3.55e-07!16;CL:0000393!3.79e-07!60;CL:0000211!3.79e-07!60;CL:0000222!7.24e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000136;6.01e-13;13!CL:0002334;5.37e-11;12!CL:0002580;1.29e-09;3!CL:0002521;1.84e-09;3!CL:0002579;1.84e-09;3!CL:0002615;4.79e-09;3!CL:0002622;1.22e-08;3!CL:0000134;1.27e-07;55!CL:0000034;1.53e-07;69!CL:0000569;7.13e-07;4!CL:0002617;7.23e-07;2!CL:0000048;8.79e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.16e-13,15;CL:0002320,5.23e-13,361;CL:0000048,1.15e-11,427;CL:0000134,2.31e-11,354;CL:0000723,2.67e-11,433;CL:0002334,4.89e-11,12;CL:0000034,7.86e-11,441;CL:0002579,1.27e-09,3;CL:0002521,1.84e-09,3;CL:0002580,2.12e-09,3;CL:0000219,3.18e-09,386;CL:0002615,1.35e-08,3;CL:0002622,1.87e-08,3;CL:0000057,1.32e-07,76;CL:0000569,3.92e-07,4;CL:0000011,3.92e-07,4;CL:0002617,8.07e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000011;7.13e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!3.99e-07!14 | |ontology_enrichment_disease=DOID:2394!3.99e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;3.42e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.15e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!7.90e-14!84;UBERON:0001637!2.71e-12!42;UBERON:0003509!2.71e-12!42;UBERON:0004572!2.71e-12!42;UBERON:0004290!6.16e-11!70;UBERON:0000914!7.29e-11!83;UBERON:0002329!7.29e-11!83;UBERON:0003077!7.29e-11!83;UBERON:0003059!7.29e-11!83;UBERON:0007282!7.29e-11!83;UBERON:0009618!7.29e-11!83;UBERON:0007285!7.29e-11!83;UBERON:0001981!1.28e-10!60;UBERON:0007500!1.28e-10!60;UBERON:0004537!1.28e-10!60;UBERON:0006965!1.28e-10!60;UBERON:0004573!1.82e-10!33;UBERON:0004571!1.82e-10!33;UBERON:0000486!1.88e-10!82;UBERON:0003914!2.46e-10!118;UBERON:0001134!5.14e-10!61;UBERON:0002036!5.14e-10!61;UBERON:0003082!5.14e-10!61;UBERON:0002385!5.76e-10!63;UBERON:0001015!5.76e-10!63;UBERON:0000383!5.76e-10!63;UBERON:0000947!2.02e-09!21;UBERON:0010191!2.02e-09!21;UBERON:0000055!5.57e-09!69;UBERON:0005256!6.93e-09!143;UBERON:0000490!3.00e-08!138;UBERON:0002199!6.47e-08!45;UBERON:0002416!6.47e-08!45;UBERON:0004535!1.08e-07!110;UBERON:0001009!1.59e-07!113;UBERON:0000926!1.85e-07!448;UBERON:0004120!1.85e-07!448;UBERON:0006603!1.85e-07!448;UBERON:0002049!2.38e-07!79;UBERON:0007798!2.38e-07!79;UBERON:0003688!6.11e-07!6;UBERON:0002358!6.11e-07!6;UBERON:0003684!6.11e-07!6;UBERON:0001178!6.11e-07!6;UBERON:0002100!7.30e-07!216 | |ontology_enrichment_uberon=UBERON:0004872!7.90e-14!84;UBERON:0001637!2.71e-12!42;UBERON:0003509!2.71e-12!42;UBERON:0004572!2.71e-12!42;UBERON:0004290!6.16e-11!70;UBERON:0000914!7.29e-11!83;UBERON:0002329!7.29e-11!83;UBERON:0003077!7.29e-11!83;UBERON:0003059!7.29e-11!83;UBERON:0007282!7.29e-11!83;UBERON:0009618!7.29e-11!83;UBERON:0007285!7.29e-11!83;UBERON:0001981!1.28e-10!60;UBERON:0007500!1.28e-10!60;UBERON:0004537!1.28e-10!60;UBERON:0006965!1.28e-10!60;UBERON:0004573!1.82e-10!33;UBERON:0004571!1.82e-10!33;UBERON:0000486!1.88e-10!82;UBERON:0003914!2.46e-10!118;UBERON:0001134!5.14e-10!61;UBERON:0002036!5.14e-10!61;UBERON:0003082!5.14e-10!61;UBERON:0002385!5.76e-10!63;UBERON:0001015!5.76e-10!63;UBERON:0000383!5.76e-10!63;UBERON:0000947!2.02e-09!21;UBERON:0010191!2.02e-09!21;UBERON:0000055!5.57e-09!69;UBERON:0005256!6.93e-09!143;UBERON:0000490!3.00e-08!138;UBERON:0002199!6.47e-08!45;UBERON:0002416!6.47e-08!45;UBERON:0004535!1.08e-07!110;UBERON:0001009!1.59e-07!113;UBERON:0000926!1.85e-07!448;UBERON:0004120!1.85e-07!448;UBERON:0006603!1.85e-07!448;UBERON:0002049!2.38e-07!79;UBERON:0007798!2.38e-07!79;UBERON:0003688!6.11e-07!6;UBERON:0002358!6.11e-07!6;UBERON:0003684!6.11e-07!6;UBERON:0001178!6.11e-07!6;UBERON:0002100!7.30e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.41e-19;9!UBERON:0000042;2.41e-19;9!UBERON:0003688;8.37e-17;6!UBERON:0002358;8.37e-17;6!UBERON:0003684;8.37e-17;6!UBERON:0001178;8.37e-17;6!UBERON:0000310;5.95e-10;10!UBERON:0002190;1.84e-09;3!UBERON:0001443;5.63e-09;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.67e-16,6;UBERON:0002358,1.67e-16,6;UBERON:0003684,1.67e-16,6;UBERON:0001178,1.67e-16,6;UBERON:0004457,4.09e-14,12;UBERON:0000042,4.09e-14,12;UBERON:0002384,2.77e-12,371;UBERON:0000310,7.81e-10,10;UBERON:0002190,1.84e-09,3;UBERON:0001443,7.19e-09,11;UBERON:0004458,3.74e-08,49;UBERON:0004923,3.73e-07,66 | |||
|phase1_expression=1.2717486548939,4.71021152560163,1.12763523276777,1.0007329835313,2.23480547213644,0.872338524100369,2.53299878168311,1.26343974685366,2.35067065379855,0,0,0,0.263766978228454,0.37129905888014,0.331397375727916,0.672325146451775,1.20538905604795,1.46062018077475,1.46379839637152,0.492484232307152,0.612002073732759,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.579386075843295,1.5905718941022,2.43317435151318,0.189069634328136,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,1.04142150482278,0.56530794192401,0.838998872419812,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0.0892997282840798,0.22452937262617,0,0,0.949265659568129,0.366403487860815,0,0,0,0.993943903390637,0.379891534993739,0.529636723252875,3.72887606973458,1.77334191099179,1.12135520028461,1.06748995729705,0.49333509683432,0.622422070799533,0.134710672069688,0.490385709340376,0,0,0,0.936480230490962,0,0.448346041655403,0.23486899728753,0,0,0.204154171254893,0,0,2.37600571456411,2.71993622206413,0,0.718618141816238,0,0.125118519871964,0,0,0,0.901428353439581,0.226864366320042,0.358779271377724,0.85422955527427,0.635795703478686,0.600182192168805,1.03052529238439,0.515281080091258,0.558350568994769,1.18143432568886,0.487185025805993,0.757301322732344,0.460249493211497,1.2931684545505,0.355009592516614,0.403008392910561,0,0,0,0,0,0,0,0.10366105501537,0,0,0,1.28648187638577,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0.387815147273333,0,0,1.59562869950922,1.04007436911366,0.257207374262142,0,0.266422179016099,0.57191197463259,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0.479249710983165,0,0,0.868687840005475,1.43833425785268,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,1.00034104211935,0.542530047399471,0.207970861530807,1.78428988797162,0.157702415033935,0.234282829985426,0.300946099727719,4.5481500811197,1.03473071292505,0.664225598535437,0.553107505625109,0.60818530127658,1.37060810223918,1.37257369524342,0,0,0,0,0,0,2.23297027036899,1.07423381301644,4.77122160536225,2.05022638809122,2.55853624533352,1.60853921143608,0,0.771048469013278,0.355123450626254,0.492762936082855,1.55776328755086,0.929683027679674,0,0.601519410909855,0,1.26295892981067,1.45672934405374,1.04899531967539,0,0,0,0,0.105551628892876,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.48335359146061,0.308097234229289,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0.929691098594572,2.51849877464512,0,0.616067160352178,0,0.869932992075073,2.03856641014312,0,0,0,0,0.255897791311334,0.42793898803392,0,0.78494864019923,0.359744915166629,0.274537029736055,0,0.606547444719948,0,0.421258456238981,0,0.974853958525138,0,0.409499734223957,1.97967604735198,0,0,0.66343897524122,0.876901770507525,0.578775534266688,0,0.405820753925408,0.6196469961995,0.281695602532241,0.143411352204052,0,0.35667105148125,0.709522128141196,1.89996871767898,3.62224382255892,0,0,0,0,1.08890984861323,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.797594390929008,0,0.179515288819544,0,0,0.457987967009312,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0.698906672968121,0,0,0,0,0.0969890164884194,0,0.225980740780532,0.137041924646751,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0.714695326373367,0,0,0.542999601753713,0,0.326587360109409,0,0,0.851940108927109,0.113312091520126,0,0,0,0,0,0,0.427149650270779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19403842309499,1.63599316893057,0.554805861502613,1.13641803165053,2.76724691927833,0.889811221596536,2.05956061557231,0.604923695052956,1.70980920641059,1.62640664988597,0.63718706865481,2.24901556081802,0.465788870628778,2.07353103920428,1.59505028734797,2.08698024724694,0.751288044986092,0,0.406870733204662,1.45478927362048,0,2.78420255927096,1.19428766609585,0,0,1.01024846629776,0,0.192619830407303,0,0.260994291965212,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0.106691729694141,0,0,0.3682119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| ||
|short_description=p7@MMP2 | |short_description=p7@MMP2 | ||
}} | }} |
Latest revision as of 00:08, 17 September 2015
Short description: | p7@MMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MMP2_5end |
Coexpression cluster: | C351_Fibroblast_Smooth_mesenchymal_Adipocyte_tenocyte_Synoviocyte_Hair |
Association with transcript: | 11bp_to_uc002eia.3_5end |
EntrezGene: | MMP2 |
HGNC: | 7166 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.16e-13 | 15 |
connective tissue cell | 5.23e-13 | 361 |
multi fate stem cell | 1.15e-11 | 427 |
mesenchymal cell | 2.31e-11 | 354 |
somatic stem cell | 2.67e-11 | 433 |
preadipocyte | 4.89e-11 | 12 |
stem cell | 7.86e-11 | 441 |
omentum preadipocyte | 1.27e-09 | 3 |
subcutaneous fat cell | 1.84e-09 | 3 |
preadipocyte of the breast | 2.12e-09 | 3 |
motile cell | 3.18e-09 | 386 |
adipocyte of omentum tissue | 1.35e-08 | 3 |
prostate stromal cell | 1.87e-08 | 3 |
fibroblast | 1.32e-07 | 76 |
cardiac mesenchymal cell | 3.92e-07 | 4 |
migratory trunk neural crest cell | 3.92e-07 | 4 |
adipocyte of breast | 8.07e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.67e-16 | 6 |
peritoneum | 1.67e-16 | 6 |
abdominal cavity | 1.67e-16 | 6 |
visceral peritoneum | 1.67e-16 | 6 |
cavity lining | 4.09e-14 | 12 |
serous membrane | 4.09e-14 | 12 |
connective tissue | 2.77e-12 | 371 |
breast | 7.81e-10 | 10 |
subcutaneous adipose tissue | 1.84e-09 | 3 |
chest | 7.19e-09 | 11 |
body cavity or lining | 3.74e-08 | 49 |
organ component layer | 3.73e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.15e-09 | 14 |