FFCP PHASE1:Hg19::chr15:80842610..80842647,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:80842610..80842647,- | |||
|coexpression_cluster_id=C3522 | |coexpression_cluster_id=C3522 | ||
|description=CAGE_peak_at_chr15:80842610..80842647,- | |description=CAGE_peak_at_chr15:80842610..80842647,- | ||
|id=chr15:80842610..80842647,- | |id=chr15:80842610..80842647,- | ||
|ontology_enrichment_celltype=CL:0000055!1.01e-45!180;CL:0000057!8.60e-40!75;CL:0000680!1.08e-23!57;CL:0000056!1.08e-23!57;CL:0000355!1.08e-23!57;CL:0000187!3.82e-23!54;CL:0000183!2.48e-22!59;CL:0000192!1.20e-21!42;CL:0000514!1.20e-21!42;CL:0000393!2.40e-19!60;CL:0000211!2.40e-19!60;CL:0000359!4.98e-19!32;CL:0000048!3.05e-17!430;CL:0000723!2.07e-16!436;CL:0002620!1.48e-15!23;CL:0000034!2.41e-15!444;CL:0000222!1.22e-11!119;CL:0002334!1.39e-11!12;CL:0002494!1.45e-11!16;CL:0002371!1.82e-09!591;CL:0000144!6.11e-09!625 | |ontology_enrichment_celltype=CL:0000055!1.01e-45!180;CL:0000057!8.60e-40!75;CL:0000680!1.08e-23!57;CL:0000056!1.08e-23!57;CL:0000355!1.08e-23!57;CL:0000187!3.82e-23!54;CL:0000183!2.48e-22!59;CL:0000192!1.20e-21!42;CL:0000514!1.20e-21!42;CL:0000393!2.40e-19!60;CL:0000211!2.40e-19!60;CL:0000359!4.98e-19!32;CL:0000048!3.05e-17!430;CL:0000723!2.07e-16!436;CL:0002620!1.48e-15!23;CL:0000034!2.41e-15!444;CL:0000222!1.22e-11!119;CL:0002334!1.39e-11!12;CL:0002494!1.45e-11!16;CL:0002371!1.82e-09!591;CL:0000144!6.11e-09!625 | ||
|ontology_enrichment_celltype_v019=CL:0002620;5.38e-20;23!CL:0000057;1.13e-16;73!CL:0000359;1.02e-10;32!CL:0000192;2.94e-10;43!CL:0002334;3.12e-10;12!CL:1000306;3.67e-10;4!CL:0002547;3.67e-10;4!CL:0002494;1.17e-08;16!CL:0002548;2.01e-08;6!CL:0002320;9.34e-08;188!CL:0000187;1.56e-07;55!CL:0000708;1.57e-07;3!CL:0002579;1.68e-07;3!CL:0000632;4.65e-07;3!CL:0002580;6.48e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.65e-45,76;CL:0002620,6.03e-20,23;CL:0000048,1.24e-18,427;CL:0000723,4.52e-18,433;CL:0000034,2.39e-17,441;CL:0000192,2.21e-12,43;CL:0000514,2.21e-12,43;CL:0000680,2.78e-12,58;CL:0000056,2.78e-12,58;CL:0000355,2.78e-12,58;CL:0000187,4.71e-12,55;CL:0000359,2.97e-11,32;CL:0000393,2.64e-10,61;CL:0000211,2.64e-10,61;CL:0002334,3.15e-10,12;CL:1000306,3.45e-10,4;CL:0002547,3.45e-10,4;CL:0000134,3.29e-09,354;CL:0002494,9.62e-09,16;CL:0002320,9.97e-09,361;CL:0002548,1.47e-08,6;CL:0000708,1.40e-07,3;CL:0000219,1.41e-07,386;CL:0002579,1.63e-07,3;CL:0000632,4.43e-07,3;CL:0002580,5.56e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;2.94e-10;43!CL:0000355;4.23e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;7.89e-11;5!DOID:450;7.89e-11;5!DOID:66;7.89e-11;5!DOID:423;7.89e-11;5!DOID:0080000;7.89e-11;5!DOID:11722;7.89e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.84e-11,5;DOID:450,7.84e-11,5;DOID:66,7.84e-11,5;DOID:423,7.84e-11,5;DOID:0080000,7.84e-11,5;DOID:11722,7.84e-11,5 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004797;3.67e-10;4!UBERON:0000415;3.67e-10;4!UBERON:0007240;3.67e-10;4!UBERON:0005742;3.67e-10;4!UBERON:0005734;3.67e-10;4!UBERON:0004664;3.67e-10;4!UBERON:0004663;3.67e-10;4!UBERON:0002097;6.32e-10;41!UBERON:0004573;3.75e-09;33!UBERON:0004571;3.75e-09;33!UBERON:0002199;3.54e-08;46!UBERON:0002416;3.54e-08;46!UBERON:0001637;4.49e-08;42!UBERON:0003509;4.49e-08;42!UBERON:0004572;4.49e-08;42!UBERON:0003210;1.57e-07;3 | |||
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| ||
|short_description=p@chr15:80842610..80842647,- | |short_description=p@chr15:80842610..80842647,- | ||
}} | }} |
Latest revision as of 04:47, 25 July 2015
Short description: | p@chr15:80842610..80842647, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:80842610..80842647, - |
Coexpression cluster: | C3522_Fibroblast_Smooth_basal_mesenchymal_Meningeal_Ewing_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.65e-45 | 76 |
skin fibroblast | 6.03e-20 | 23 |
multi fate stem cell | 1.24e-18 | 427 |
somatic stem cell | 4.52e-18 | 433 |
stem cell | 2.39e-17 | 441 |
smooth muscle cell | 2.21e-12 | 43 |
smooth muscle myoblast | 2.21e-12 | 43 |
muscle precursor cell | 2.78e-12 | 58 |
myoblast | 2.78e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.78e-12 | 58 |
muscle cell | 4.71e-12 | 55 |
vascular associated smooth muscle cell | 2.97e-11 | 32 |
electrically responsive cell | 2.64e-10 | 61 |
electrically active cell | 2.64e-10 | 61 |
preadipocyte | 3.15e-10 | 12 |
fibroblast of tunica adventitia of artery | 3.45e-10 | 4 |
fibroblast of the aortic adventitia | 3.45e-10 | 4 |
mesenchymal cell | 3.29e-09 | 354 |
cardiocyte | 9.62e-09 | 16 |
connective tissue cell | 9.97e-09 | 361 |
cardiac fibroblast | 1.47e-08 | 6 |
leptomeningeal cell | 1.40e-07 | 3 |
motile cell | 1.41e-07 | 386 |
omentum preadipocyte | 1.63e-07 | 3 |
hepatic stellate cell | 4.43e-07 | 3 |
preadipocyte of the breast | 5.56e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.84e-11 | 5 |
myotonic disease | 7.84e-11 | 5 |
muscle tissue disease | 7.84e-11 | 5 |
myopathy | 7.84e-11 | 5 |
muscular disease | 7.84e-11 | 5 |
myotonic dystrophy | 7.84e-11 | 5 |