FFCP PHASE1:Hg19::chr15:77907545..77907560,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84894 | |EntrezGene=84894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=21205 | |HGNC=21205 | ||
|TSSclassifier=strong | |||
|UniProt=Q96FE5 | |UniProt=Q96FE5 | ||
|association_with_transcript=-152bp_to_AK027500_5end | |association_with_transcript=-152bp_to_AK027500_5end | ||
|cluster_id=chr15:77907545..77907560,- | |||
|coexpression_cluster_id=C837 | |coexpression_cluster_id=C837 | ||
|description=CAGE_peak_4_at_LINGO1_5end | |description=CAGE_peak_4_at_LINGO1_5end | ||
|id=chr15:77907545..77907560,- | |id=chr15:77907545..77907560,- | ||
|ontology_enrichment_celltype=CL:0000540!1.84e-09!6;CL:0000031!1.84e-09!6;CL:0000404!1.84e-09!6;CL:0000148!2.27e-08!10;CL:0000541!2.27e-08!10;CL:0002322!4.74e-08!5;CL:0000047!8.68e-07!8 | |ontology_enrichment_celltype=CL:0000540!1.84e-09!6;CL:0000031!1.84e-09!6;CL:0000404!1.84e-09!6;CL:0000148!2.27e-08!10;CL:0000541!2.27e-08!10;CL:0002322!4.74e-08!5;CL:0000047!8.68e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.66e-17;5!CL:0000540;2.34e-15;6!CL:0000404;2.34e-15;6!CL:0000148;9.41e-09;10!CL:0002321;5.76e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,8.78e-18,5;CL:0000540,2.46e-15,6;CL:0000031,2.46e-15,6;CL:0000404,2.46e-15,6;CL:0000047,2.01e-11,8;CL:0000148,6.36e-09,10;CL:0000541,6.36e-09,10 | |||
|ontology_enrichment_development_v019=CL:0000031;2.34e-15;6!UBERON:0006601;9.97e-09;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;2.45e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.76e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!7.06e-39!82;UBERON:0000073!3.19e-38!94;UBERON:0001016!3.19e-38!94;UBERON:0005743!1.13e-37!86;UBERON:0001049!7.46e-34!57;UBERON:0005068!7.46e-34!57;UBERON:0006241!7.46e-34!57;UBERON:0007135!7.46e-34!57;UBERON:0000955!3.42e-30!69;UBERON:0006238!3.42e-30!69;UBERON:0002346!6.03e-30!90;UBERON:0001869!3.64e-29!32;UBERON:0003080!4.09e-29!42;UBERON:0001893!5.10e-29!34;UBERON:0002020!5.71e-29!34;UBERON:0003528!5.71e-29!34;UBERON:0002616!9.52e-29!59;UBERON:0002780!4.69e-28!41;UBERON:0001890!4.69e-28!41;UBERON:0006240!4.69e-28!41;UBERON:0002791!6.03e-28!33;UBERON:0002619!6.73e-28!22;UBERON:0007023!8.63e-27!115;UBERON:0003075!9.71e-26!86;UBERON:0007284!9.71e-26!86;UBERON:0001950!2.10e-25!20;UBERON:0000956!9.55e-24!25;UBERON:0000203!9.55e-24!25;UBERON:0000924!5.66e-23!173;UBERON:0006601!5.66e-23!173;UBERON:0004121!7.26e-20!169;UBERON:0003056!4.01e-19!61;UBERON:0000153!4.91e-14!129;UBERON:0007811!4.91e-14!129;UBERON:0000033!8.02e-14!123;UBERON:0001871!1.85e-09!7;UBERON:0000200!5.26e-09!6;UBERON:0000349!5.96e-08!5;UBERON:0001872!9.64e-08!5;UBERON:0002021!9.77e-08!5;UBERON:0002420!2.06e-07!9;UBERON:0007245!2.06e-07!9;UBERON:0010009!2.06e-07!9;UBERON:0010011!2.06e-07!9;UBERON:0000454!2.06e-07!9;UBERON:0002308!8.54e-07!9;UBERON:0000125!8.54e-07!9 | |ontology_enrichment_uberon=UBERON:0001017!7.06e-39!82;UBERON:0000073!3.19e-38!94;UBERON:0001016!3.19e-38!94;UBERON:0005743!1.13e-37!86;UBERON:0001049!7.46e-34!57;UBERON:0005068!7.46e-34!57;UBERON:0006241!7.46e-34!57;UBERON:0007135!7.46e-34!57;UBERON:0000955!3.42e-30!69;UBERON:0006238!3.42e-30!69;UBERON:0002346!6.03e-30!90;UBERON:0001869!3.64e-29!32;UBERON:0003080!4.09e-29!42;UBERON:0001893!5.10e-29!34;UBERON:0002020!5.71e-29!34;UBERON:0003528!5.71e-29!34;UBERON:0002616!9.52e-29!59;UBERON:0002780!4.69e-28!41;UBERON:0001890!4.69e-28!41;UBERON:0006240!4.69e-28!41;UBERON:0002791!6.03e-28!33;UBERON:0002619!6.73e-28!22;UBERON:0007023!8.63e-27!115;UBERON:0003075!9.71e-26!86;UBERON:0007284!9.71e-26!86;UBERON:0001950!2.10e-25!20;UBERON:0000956!9.55e-24!25;UBERON:0000203!9.55e-24!25;UBERON:0000924!5.66e-23!173;UBERON:0006601!5.66e-23!173;UBERON:0004121!7.26e-20!169;UBERON:0003056!4.01e-19!61;UBERON:0000153!4.91e-14!129;UBERON:0007811!4.91e-14!129;UBERON:0000033!8.02e-14!123;UBERON:0001871!1.85e-09!7;UBERON:0000200!5.26e-09!6;UBERON:0000349!5.96e-08!5;UBERON:0001872!9.64e-08!5;UBERON:0002021!9.77e-08!5;UBERON:0002420!2.06e-07!9;UBERON:0007245!2.06e-07!9;UBERON:0010009!2.06e-07!9;UBERON:0010011!2.06e-07!9;UBERON:0000454!2.06e-07!9;UBERON:0002308!8.54e-07!9;UBERON:0000125!8.54e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.48e-38;22!UBERON:0001950;1.32e-36;20!UBERON:0000956;4.53e-33;25!UBERON:0000203;4.53e-33;25!UBERON:0001869;2.77e-26;32!UBERON:0002791;1.33e-25;32!UBERON:0003528;6.06e-24;34!UBERON:0002020;6.06e-24;34!UBERON:0001893;9.62e-24;34!UBERON:0001871;2.57e-19;6!UBERON:0002050;1.01e-18;5!UBERON:0005423;1.01e-18;5!UBERON:0002780;1.15e-17;41!UBERON:0001890;1.15e-17;41!UBERON:0002346;1.16e-15;4!UBERON:0000923;1.16e-15;4!UBERON:0010316;1.16e-15;4!UBERON:0005291;1.16e-15;4!UBERON:0000955;1.50e-13;68!UBERON:0000073;2.33e-12;53!UBERON:0002616;2.33e-12;53!UBERON:0002021;2.92e-12;5!UBERON:0000922;1.74e-11;49!UBERON:0001017;4.15e-11;75!UBERON:0001016;2.21e-10;83!UBERON:0001876;6.49e-09;2!UBERON:0002771;1.90e-08;2!UBERON:0000349;1.33e-07;5!UBERON:0001872;4.82e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,8.55e-38,22;UBERON:0001950,1.85e-36,20;UBERON:0000956,5.77e-33,25;UBERON:0000203,5.77e-33,25;UBERON:0001016,1.18e-30,89;UBERON:0001017,5.51e-30,81;UBERON:0002791,1.75e-28,32;UBERON:0001869,1.75e-28,32;UBERON:0003528,1.31e-26,34;UBERON:0002020,1.31e-26,34;UBERON:0001893,1.31e-26,34;UBERON:0002780,4.31e-24,41;UBERON:0001890,4.31e-24,41;UBERON:0003080,4.31e-24,41;UBERON:0006240,4.31e-24,41;UBERON:0000955,4.74e-22,68;UBERON:0006238,4.74e-22,68;UBERON:0000073,6.62e-20,53;UBERON:0002616,6.62e-20,53;UBERON:0001871,3.12e-19,6;UBERON:0004121,1.03e-18,171;UBERON:0000924,1.03e-18,171;UBERON:0006601,1.03e-18,171;UBERON:0001049,1.32e-18,56;UBERON:0005068,1.32e-18,56;UBERON:0006241,1.32e-18,56;UBERON:0007135,1.32e-18,56;UBERON:0002346,2.43e-18,86;UBERON:0003056,1.03e-16,61;UBERON:0003075,1.04e-12,82;UBERON:0007284,1.04e-12,82;UBERON:0002021,2.85e-12,5;UBERON:0011216,1.86e-10,223;UBERON:0010371,3.48e-10,104;UBERON:0001876,7.02e-09,2;UBERON:0007023,8.10e-09,114;UBERON:0002771,2.09e-08,2;UBERON:0000349,1.34e-07,5;UBERON:0010314,4.73e-07,132;UBERON:0001872,4.99e-07,5 | |||
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|short_description=p4@LINGO1 | |short_description=p4@LINGO1 | ||
}} | }} |
Latest revision as of 05:37, 19 September 2015
Short description: | p4@LINGO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LINGO1_5end |
Coexpression cluster: | C837_neuroectodermal_duodenum_temporal_occipital_medial_carcinoid_parietal |
Association with transcript: | -152bp_to_AK027500_5end |
EntrezGene: | LINGO1 |
HGNC: | 21205 |
UniProt: | Q96FE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 8.78e-18 | 5 |
neuron | 2.46e-15 | 6 |
neuroblast | 2.46e-15 | 6 |
electrically signaling cell | 2.46e-15 | 6 |
neuronal stem cell | 2.01e-11 | 8 |
melanocyte | 6.36e-09 | 10 |
melanoblast | 6.36e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.76e-09 | 10 |