FFCP PHASE1:Hg19::chr14:95081165..95081174,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=12 | |EntrezGene=12 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16 | |HGNC=16 | ||
|TSSclassifier=strong | |||
|UniProt=P01011 | |UniProt=P01011 | ||
|association_with_transcript=323bp_to_J05176_5end | |association_with_transcript=323bp_to_J05176_5end | ||
|cluster_id=chr14:95081165..95081174,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_15_at_SERPINA3_5end | |description=CAGE_peak_15_at_SERPINA3_5end | ||
|id=chr14:95081165..95081174,+ | |id=chr14:95081165..95081174,+ | ||
|ontology_enrichment_celltype=CL:0000181!3.09e-10!12;CL:0000417!3.09e-10!12;CL:0000668!3.09e-10!12;CL:0000414!3.09e-10!12;CL:0000412!3.09e-10!12;CL:0000182!3.09e-10!12 | |ontology_enrichment_celltype=CL:0000181!3.09e-10!12;CL:0000417!3.09e-10!12;CL:0000668!3.09e-10!12;CL:0000414!3.09e-10!12;CL:0000412!3.09e-10!12;CL:0000182!3.09e-10!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.87e-19;12!CL:0000746;1.67e-09;3!CL:0000737;1.92e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.87e-19,12;CL:0000746,1.67e-09,3;CL:0000513,1.67e-09,3;CL:0000737,1.92e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.54e-10;11!CL:0000513;1.67e-09;3!UBERON:0009497;1.36e-08;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.05e-13!115;UBERON:0005057!1.19e-11!26;UBERON:0008835!1.32e-11!22;UBERON:0003894!1.32e-11!22;UBERON:0009854!5.04e-11!23;UBERON:0002107!5.53e-11!19;UBERON:0006925!5.53e-11!19;UBERON:0008836!5.53e-11!19;UBERON:0001896!7.57e-11!3;UBERON:0005290!7.57e-11!3;UBERON:0010096!7.57e-11!3;UBERON:0007499!5.31e-10!25;UBERON:0009497!5.31e-10!25;UBERON:0000015!5.31e-10!25;UBERON:0002423!5.31e-10!25;UBERON:0006235!5.31e-10!25;UBERON:0004161!5.31e-10!25;UBERON:0009856!1.50e-09!26;UBERON:0000949!6.43e-09!45;UBERON:0003127!2.72e-08!2;UBERON:0005177!4.14e-08!107;UBERON:0005172!7.79e-08!55;UBERON:0005173!7.79e-08!55;UBERON:0000475!9.13e-08!365;UBERON:0003076!1.61e-07!15;UBERON:0003057!1.61e-07!15;UBERON:0000477!2.50e-07!286;UBERON:0000481!2.60e-07!347;UBERON:0003075!4.50e-07!86;UBERON:0007284!4.50e-07!86;UBERON:0002298!4.80e-07!8;UBERON:0004733!8.00e-07!12;UBERON:0002028!8.00e-07!12;UBERON:0007277!8.00e-07!12;UBERON:0002417!8.55e-07!61;UBERON:0000916!8.55e-07!61;UBERON:0002368!9.36e-07!35 | |ontology_enrichment_uberon=UBERON:0007023!2.05e-13!115;UBERON:0005057!1.19e-11!26;UBERON:0008835!1.32e-11!22;UBERON:0003894!1.32e-11!22;UBERON:0009854!5.04e-11!23;UBERON:0002107!5.53e-11!19;UBERON:0006925!5.53e-11!19;UBERON:0008836!5.53e-11!19;UBERON:0001896!7.57e-11!3;UBERON:0005290!7.57e-11!3;UBERON:0010096!7.57e-11!3;UBERON:0007499!5.31e-10!25;UBERON:0009497!5.31e-10!25;UBERON:0000015!5.31e-10!25;UBERON:0002423!5.31e-10!25;UBERON:0006235!5.31e-10!25;UBERON:0004161!5.31e-10!25;UBERON:0009856!1.50e-09!26;UBERON:0000949!6.43e-09!45;UBERON:0003127!2.72e-08!2;UBERON:0005177!4.14e-08!107;UBERON:0005172!7.79e-08!55;UBERON:0005173!7.79e-08!55;UBERON:0000475!9.13e-08!365;UBERON:0003076!1.61e-07!15;UBERON:0003057!1.61e-07!15;UBERON:0000477!2.50e-07!286;UBERON:0000481!2.60e-07!347;UBERON:0003075!4.50e-07!86;UBERON:0007284!4.50e-07!86;UBERON:0002298!4.80e-07!8;UBERON:0004733!8.00e-07!12;UBERON:0002028!8.00e-07!12;UBERON:0007277!8.00e-07!12;UBERON:0002417!8.55e-07!61;UBERON:0000916!8.55e-07!61;UBERON:0002368!9.36e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.07e-33;19!UBERON:0006925;7.07e-33;19!UBERON:0000996;1.26e-25;1!UBERON:0002423;4.28e-25;25!UBERON:0002365;2.93e-20;31!UBERON:0002330;2.93e-20;31!UBERON:0002368;1.58e-17;33!UBERON:0000949;9.88e-17;43!UBERON:0005172;3.31e-09;52!UBERON:0005173;3.31e-09;52!UBERON:0002417;3.74e-07;58!UBERON:0000916;3.74e-07;58!UBERON:0002530;9.45e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.07e-33,19;UBERON:0006925,7.07e-33,19;UBERON:0008836,7.07e-33,19;UBERON:0008835,1.86e-28,22;UBERON:0003894,1.86e-28,22;UBERON:0009854,3.07e-27,23;UBERON:0000996,1.26e-25,1;UBERON:0007499,4.28e-25,25;UBERON:0009497,4.28e-25,25;UBERON:0000015,4.28e-25,25;UBERON:0002423,4.28e-25,25;UBERON:0006235,4.28e-25,25;UBERON:0004161,4.28e-25,25;UBERON:0009856,3.81e-24,26;UBERON:0002365,2.58e-20,31;UBERON:0002330,2.58e-20,31;UBERON:0000949,5.46e-20,45;UBERON:0002368,4.92e-18,35;UBERON:0003929,8.59e-12,54;UBERON:0005172,8.59e-12,54;UBERON:0005173,8.59e-12,54;UBERON:0002530,8.19e-11,59;UBERON:0002417,1.23e-10,60;UBERON:0000916,1.23e-10,60;UBERON:0005256,5.70e-10,122;UBERON:0005177,5.70e-09,101;UBERON:0002100,6.23e-08,199;UBERON:0005911,7.83e-08,82;UBERON:0003914,9.83e-08,117;UBERON:0004921,1.34e-07,118;UBERON:0003104,1.39e-07,160;UBERON:0009142,1.39e-07,160;UBERON:0001041,2.16e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2106041786197,18.6737171168749,17.7236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.63186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0.399358000997982,0,0,0,0,0,0.0787831823072236,0.247247575143499,0.337017719270924,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,8.3534773196507,3.97520666736664,0,0.39669780522807,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0.573409195690071,0.221858103073705,0.124192805882767,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,4.68908406739856,0,0,0.147856086217045,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.932388670104793,0.332660356546013,0,0,0,0,0,0,0,1.33151354837103,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2106041786197,18.6737171168749,17.7236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.63186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0.399358000997982,0,0,0,0,0,0.0787831823072236,0.247247575143499,0.337017719270924,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.236417121897595,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,8.3534773196507,3.97520666736664,0,0.39669780522807,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0.573409195690071,0.221858103073705,0.124192805882767,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,4.68908406739856,0,0,0.147856086217045,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.932388670104793,0.332660356546013,0,0,0,0,0,0,0,1.33151354837103,0,0 | ||
|short_description=p15@SERPINA3 | |short_description=p15@SERPINA3 | ||
}} | }} |
Latest revision as of 18:53, 16 September 2015
Short description: | p15@SERPINA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_SERPINA3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 323bp_to_J05176_5end |
EntrezGene: | SERPINA3 |
HGNC: | 16 |
UniProt: | P01011 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.87e-19 | 12 |
cardiac muscle cell | 1.67e-09 | 3 |
cardiac muscle myoblast | 1.67e-09 | 3 |
striated muscle cell | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 7.07e-33 | 19 |
digestive gland | 7.07e-33 | 19 |
liver bud | 7.07e-33 | 19 |
hepatic diverticulum | 1.86e-28 | 22 |
liver primordium | 1.86e-28 | 22 |
digestive tract diverticulum | 3.07e-27 | 23 |
vagina | 1.26e-25 | 1 |
epithelial sac | 4.28e-25 | 25 |
epithelium of foregut-midgut junction | 4.28e-25 | 25 |
anatomical boundary | 4.28e-25 | 25 |
hepatobiliary system | 4.28e-25 | 25 |
foregut-midgut junction | 4.28e-25 | 25 |
septum transversum | 4.28e-25 | 25 |
sac | 3.81e-24 | 26 |
exocrine gland | 2.58e-20 | 31 |
exocrine system | 2.58e-20 | 31 |
endocrine system | 5.46e-20 | 45 |
endocrine gland | 4.92e-18 | 35 |
gut epithelium | 8.59e-12 | 54 |
abdomen element | 8.59e-12 | 54 |
abdominal segment element | 8.59e-12 | 54 |
gland | 8.19e-11 | 59 |
abdominal segment of trunk | 1.23e-10 | 60 |
abdomen | 1.23e-10 | 60 |
trunk mesenchyme | 5.70e-10 | 122 |
trunk region element | 5.70e-09 | 101 |
trunk | 6.23e-08 | 199 |
endo-epithelium | 7.83e-08 | 82 |
epithelial tube | 9.83e-08 | 117 |
subdivision of digestive tract | 1.34e-07 | 118 |
mesenchyme | 1.39e-07 | 160 |
entire embryonic mesenchyme | 1.39e-07 | 160 |
foregut | 2.16e-07 | 87 |