FFCP PHASE1:Hg19::chr14:93383646..93383662,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:93383646..93383662,- | |||
|coexpression_cluster_id=C126 | |coexpression_cluster_id=C126 | ||
|description=CAGE_peak_at_chr14:93383646..93383662,- | |description=CAGE_peak_at_chr14:93383646..93383662,- | ||
|id=chr14:93383646..93383662,- | |id=chr14:93383646..93383662,- | ||
|ontology_enrichment_celltype=CL:0000242!1.42e-23!2;CL:0000312!5.20e-10!5;CL:0000333!6.14e-09!41;CL:0000240!1.74e-08!6;CL:0000311!1.74e-08!6;CL:0000079!1.74e-08!6;CL:0000237!1.74e-08!6;CL:0000036!1.74e-08!6;CL:0000357!1.74e-08!6;CL:0000114!1.74e-08!6;CL:0002535!4.56e-07!2 | |ontology_enrichment_celltype=CL:0000242!1.42e-23!2;CL:0000312!5.20e-10!5;CL:0000333!6.14e-09!41;CL:0000240!1.74e-08!6;CL:0000311!1.74e-08!6;CL:0000079!1.74e-08!6;CL:0000237!1.74e-08!6;CL:0000036!1.74e-08!6;CL:0000357!1.74e-08!6;CL:0000114!1.74e-08!6;CL:0002535!4.56e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.34e-40;2!CL:0000242;1.34e-40;2!CL:0000312;6.40e-17;5!CL:0000240;2.85e-14;6!CL:0000311;2.85e-14;6!CL:0000079;2.85e-14;6!CL:0000237;2.85e-14;6!CL:0002535;1.92e-11;2!CL:0000362;7.74e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.64e-40,2;CL:0000312,6.94e-17,5;CL:0000240,3.04e-14,6;CL:0000311,3.04e-14,6;CL:0000079,3.04e-14,6;CL:0000237,3.04e-14,6;CL:0000036,3.04e-14,6;CL:0000357,3.04e-14,6;CL:0000114,3.04e-14,6;CL:0002535,1.82e-11,2;CL:0000362,8.09e-10,9 | |||
|ontology_enrichment_development_v019=CL:0000357;2.85e-14;6!CL:0000114;2.85e-14;6 | |||
|ontology_enrichment_disease=DOID:169!3.91e-17!6;DOID:5093!2.92e-12!4;DOID:1612!2.92e-12!4;DOID:171!1.62e-10!10;DOID:0050687!6.05e-08!143 | |ontology_enrichment_disease=DOID:169!3.91e-17!6;DOID:5093!2.92e-12!4;DOID:1612!2.92e-12!4;DOID:171!1.62e-10!10;DOID:0050687!6.05e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:5093;9.45e-21;4!DOID:1612;9.45e-21;4!DOID:305;1.81e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.55e-21,4;DOID:1612,8.55e-21,4;DOID:305,5.39e-09,106;DOID:0050687,1.48e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000013!1.99e-20!5;UBERON:0002410!1.99e-20!5;UBERON:0000010!1.26e-11!8;UBERON:0002108!4.16e-07!14;UBERON:0006955!4.56e-07!2;UBERON:0004801!4.56e-07!2 | |ontology_enrichment_uberon=UBERON:0000013!1.99e-20!5;UBERON:0002410!1.99e-20!5;UBERON:0000010!1.26e-11!8;UBERON:0002108!4.16e-07!14;UBERON:0006955!4.56e-07!2;UBERON:0004801!4.56e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.92e-11;2!UBERON:0004801;1.92e-11;2!UBERON:0000310;6.80e-09;10!UBERON:0001443;3.63e-08;11!UBERON:0002114;7.76e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.82e-11,2;UBERON:0004801,1.82e-11,2;UBERON:0000310,6.54e-09,10;UBERON:0001443,3.50e-08,11;UBERON:0002114,8.29e-08,2 | |||
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|short_description=p@chr14:93383646..93383662,- | |short_description=p@chr14:93383646..93383662,- | ||
}} | }} |
Latest revision as of 23:45, 24 July 2015
Short description: | p@chr14:93383646..93383662, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:93383646..93383662, - |
Coexpression cluster: | C126_gastrointestinal_argyrophil_smallcell_merkel_bile_insula_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.64e-40 | 2 |
keratinocyte | 6.94e-17 | 5 |
stratified squamous epithelial cell | 3.04e-14 | 6 |
keratin accumulating cell | 3.04e-14 | 6 |
stratified epithelial cell | 3.04e-14 | 6 |
keratinizing barrier epithelial cell | 3.04e-14 | 6 |
epithelial fate stem cell | 3.04e-14 | 6 |
stratified epithelial stem cell | 3.04e-14 | 6 |
surface ectodermal cell | 3.04e-14 | 6 |
epithelial cell of cervix | 1.82e-11 | 2 |
epidermal cell | 8.09e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.82e-11 | 2 |
cervix epithelium | 1.82e-11 | 2 |
breast | 6.54e-09 | 10 |
chest | 3.50e-08 | 11 |
duodenum | 8.29e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.55e-21 | 4 |
breast cancer | 8.55e-21 | 4 |
carcinoma | 5.39e-09 | 106 |
cell type cancer | 1.48e-08 | 143 |