FFCP PHASE1:Hg19::chr14:81421710..81421757,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7253 | |EntrezGene=7253 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12373 | |HGNC=12373 | ||
|TSSclassifier=strong | |||
|UniProt=B4E0H2 | |UniProt=B4E0H2 | ||
|association_with_transcript=1bp_to_ENST00000412429_5end | |association_with_transcript=1bp_to_ENST00000412429_5end | ||
|cluster_id=chr14:81421710..81421757,+ | |||
|coexpression_cluster_id=C1733 | |coexpression_cluster_id=C1733 | ||
|description=CAGE_peak_4_at_TSHR_5end | |description=CAGE_peak_4_at_TSHR_5end | ||
|id=chr14:81421710..81421757,+ | |id=chr14:81421710..81421757,+ | ||
|ontology_enrichment_celltype=CL:0000084!4.46e-07!25;CL:0000827!4.46e-07!25 | |ontology_enrichment_celltype=CL:0000084!4.46e-07!25;CL:0000827!4.46e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000815;1.78e-09;2!CL:0000792;1.78e-09;2!CL:0002677;1.78e-09;2!CL:0000898;9.91e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,1.86e-09,2;CL:0000792,1.86e-09,2;CL:0002677,1.86e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.91e-14;5!UBERON:0006965;1.33e-09;2!UBERON:0006241;9.91e-07;3!UBERON:0003057;9.91e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!6.40e-12!2;UBERON:0000974!5.15e-09!10;UBERON:0009722!2.70e-08!11;UBERON:0007690!2.70e-08!11;UBERON:0001896!1.79e-07!3;UBERON:0005290!1.79e-07!3;UBERON:0010096!1.79e-07!3;UBERON:0004177!1.82e-07!7 | |ontology_enrichment_uberon=UBERON:0000341!6.40e-12!2;UBERON:0000974!5.15e-09!10;UBERON:0009722!2.70e-08!11;UBERON:0007690!2.70e-08!11;UBERON:0001896!1.79e-07!3;UBERON:0005290!1.79e-07!3;UBERON:0010096!1.79e-07!3;UBERON:0004177!1.82e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.43e-34;2!UBERON:0005058;1.43e-34;2!UBERON:0009113;1.43e-34;2!UBERON:0000341;9.92e-34;2!UBERON:0004177;1.78e-14;5!UBERON:0005057;1.78e-14;5!UBERON:0002046;1.91e-14;5!UBERON:0000974;6.00e-12;6!UBERON:0002368;5.95e-07;33!UBERON:0002240;9.91e-07;3!UBERON:0005174;9.91e-07;3!UBERON:0001137;9.91e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,1.39e-33,2;UBERON:0000974,7.26e-27,10;UBERON:0009722,8.77e-25,11;UBERON:0007690,8.77e-25,11;UBERON:0002370,7.39e-18,4;UBERON:0005058,7.39e-18,4;UBERON:0009113,7.39e-18,4;UBERON:0003295,7.39e-18,4;UBERON:0005562,7.39e-18,4;UBERON:0008814,2.64e-15,18;UBERON:0002046,1.97e-14,5;UBERON:0004117,1.97e-14,5;UBERON:0007689,1.97e-14,5;UBERON:0007123,1.97e-14,5;UBERON:0003091,1.97e-14,5;UBERON:0003351,3.08e-12,6;UBERON:0004177,1.27e-10,7;UBERON:0005057,1.27e-10,7;UBERON:0002368,5.16e-08,35;UBERON:0003408,1.05e-07,10;UBERON:0001042,1.05e-07,10;UBERON:0009145,1.05e-07,10;UBERON:0006562,4.43e-07,11;UBERON:0002240,9.64e-07,3;UBERON:0005174,9.64e-07,3;UBERON:0001137,9.64e-07,3 | |||
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|short_description=p4@TSHR | |short_description=p4@TSHR | ||
}} | }} |
Latest revision as of 07:55, 16 September 2015
Short description: | p4@TSHR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TSHR_5end |
Coexpression cluster: | C1733_thymus_thyroid_throat_Hodgkin_CD4_vein_chronic |
Association with transcript: | 1bp_to_ENST00000412429_5end |
EntrezGene: | TSHR |
HGNC: | 12373 |
UniProt: | B4E0H2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 1.86e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.86e-09 | 2 |
naive regulatory T cell | 1.86e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
throat | 1.39e-33 | 2 |
neck | 7.26e-27 | 10 |
entire pharyngeal arch endoderm | 8.77e-25 | 11 |
early pharyngeal endoderm | 8.77e-25 | 11 |
thymus | 7.39e-18 | 4 |
hemolymphoid system gland | 7.39e-18 | 4 |
thymic region | 7.39e-18 | 4 |
pharyngeal gland | 7.39e-18 | 4 |
thymus primordium | 7.39e-18 | 4 |
pharyngeal arch system | 2.64e-15 | 18 |
thyroid gland | 1.97e-14 | 5 |
pharyngeal pouch | 1.97e-14 | 5 |
thyroid diverticulum | 1.97e-14 | 5 |
pharyngeal pouch 2 | 1.97e-14 | 5 |
thyroid primordium | 1.97e-14 | 5 |
pharyngeal epithelium | 3.08e-12 | 6 |
hemopoietic organ | 1.27e-10 | 7 |
immune organ | 1.27e-10 | 7 |
endocrine gland | 5.16e-08 | 35 |
gland of gut | 1.05e-07 | 10 |
chordate pharynx | 1.05e-07 | 10 |
pharyngeal region of foregut | 1.05e-07 | 10 |
pharynx | 4.43e-07 | 11 |
spinal cord | 9.64e-07 | 3 |
dorsal region element | 9.64e-07 | 3 |
dorsum | 9.64e-07 | 3 |