FFCP PHASE1:Hg19::chr14:75081670..75081682,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:75081670..75081682,- | |||
|coexpression_cluster_id=C3454 | |coexpression_cluster_id=C3454 | ||
|description=CAGE_peak_at_chr14:75081670..75081682,- | |description=CAGE_peak_at_chr14:75081670..75081682,- | ||
|id=chr14:75081670..75081682,- | |id=chr14:75081670..75081682,- | ||
|ontology_enrichment_celltype=CL:0000075!9.18e-07!27 | |ontology_enrichment_celltype=CL:0000075!9.18e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002621;1.90e-15;3!CL:0000064;3.47e-15;3!CL:0000067;3.47e-15;3!CL:0005012;3.47e-15;3!CL:0002304;3.47e-15;3!CL:0000075;5.25e-10;27!CL:1000507;7.23e-08;10!CL:1000494;7.23e-08;10!CL:0000239;3.07e-07;3!CL:1000615;3.07e-07;3!CL:0002306;3.07e-07;3!CL:0000307;3.07e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.23e-15,3;CL:0000064,2.31e-15,3;CL:0000067,2.31e-15,3;CL:0005012,2.31e-15,3;CL:0002304,2.31e-15,3;CL:0000075,4.51e-10,27;CL:1000507,7.93e-08,10;CL:1000494,7.93e-08,10;CL:0002076,1.22e-07,42;CL:0000239,2.72e-07,3;CL:1000615,2.72e-07,3;CL:0002306,2.72e-07,3;CL:0000068,3.38e-07,3;CL:0000069,3.38e-07,3;CL:0000307,3.38e-07,3;CL:0000377,3.38e-07,3;CL:0000066,6.64e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000377;3.07e-07;3 | |||
|ontology_enrichment_disease=DOID:193!8.42e-09!29;DOID:120!1.35e-08!27;DOID:2394!4.10e-08!14 | |ontology_enrichment_disease=DOID:193!8.42e-09!29;DOID:120!1.35e-08!27;DOID:2394!4.10e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.00e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.05e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001444!1.53e-11!48;UBERON:0007625!5.27e-11!11;UBERON:0000020!2.35e-09!23;UBERON:0000019!2.75e-09!19;UBERON:0000047!2.75e-09!19;UBERON:0004088!2.75e-09!19;UBERON:0003072!2.75e-09!19;UBERON:0003071!2.75e-09!19;UBERON:0004128!2.75e-09!19;UBERON:0001032!8.76e-09!24;UBERON:0004456!8.76e-09!24;UBERON:0000970!1.24e-08!20;UBERON:0001801!2.15e-08!14;UBERON:0002104!4.80e-08!21;UBERON:0001456!4.80e-08!21 | |ontology_enrichment_uberon=UBERON:0001444!1.53e-11!48;UBERON:0007625!5.27e-11!11;UBERON:0000020!2.35e-09!23;UBERON:0000019!2.75e-09!19;UBERON:0000047!2.75e-09!19;UBERON:0004088!2.75e-09!19;UBERON:0003072!2.75e-09!19;UBERON:0003071!2.75e-09!19;UBERON:0004128!2.75e-09!19;UBERON:0001032!8.76e-09!24;UBERON:0004456!8.76e-09!24;UBERON:0000970!1.24e-08!20;UBERON:0001801!2.15e-08!14;UBERON:0002104!4.80e-08!21;UBERON:0001456!4.80e-08!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.90e-15;3!UBERON:0001778;3.47e-15;3!UBERON:0001775;3.47e-15;3!UBERON:0001801;1.09e-11;14!UBERON:0000488;1.64e-11;4!UBERON:0007625;1.01e-10;11!UBERON:0000486;5.54e-10;12!UBERON:0010371;1.18e-08;31!UBERON:0000019;1.89e-08;19!UBERON:0000047;1.89e-08;19!UBERON:0004088;1.89e-08;19!UBERON:0010230;1.89e-08;19!UBERON:0000970;5.38e-08;20!UBERON:0004211;7.23e-08;10!UBERON:0009773;7.23e-08;10!UBERON:0001231;7.23e-08;10!UBERON:0004810;7.23e-08;10!UBERON:0002203;8.12e-08;6!UBERON:0001768;8.12e-08;6!UBERON:0002200;8.12e-08;6!UBERON:0002104;1.38e-07;21!UBERON:0001456;1.38e-07;21!UBERON:0006853;3.07e-07;3!UBERON:0007685;3.07e-07;3!UBERON:0004134;3.07e-07;3!UBERON:0000020;7.15e-07;23!UBERON:0003929;7.31e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.23e-15,3;UBERON:0001778,2.31e-15,3;UBERON:0001775,2.31e-15,3;UBERON:0001801,9.21e-12,14;UBERON:0000488,1.21e-11,4;UBERON:0007625,8.65e-11,11;UBERON:0000019,4.79e-08,20;UBERON:0000047,4.79e-08,20;UBERON:0010312,4.79e-08,20;UBERON:0004088,4.79e-08,20;UBERON:0010230,4.79e-08,20;UBERON:0003072,4.79e-08,20;UBERON:0004128,4.79e-08,20;UBERON:0003071,4.79e-08,20;UBERON:0002203,6.68e-08,6;UBERON:0001768,6.68e-08,6;UBERON:0002200,6.68e-08,6;UBERON:0004810,7.93e-08,10;UBERON:0000970,1.24e-07,21;UBERON:0002104,1.24e-07,21;UBERON:0006853,2.72e-07,3;UBERON:0007685,2.72e-07,3;UBERON:0004134,2.72e-07,3;UBERON:0001456,2.95e-07,22;UBERON:0000033,8.81e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0.204000691244253,0,0,0,0.627713197974014,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0.726991193897824,0.755751887377619,1.21292030593908,0.232429036905685,0,0.619412741790207,0,0,0.236482229888585,0,0,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0,0.639337125799041,0.329851300186716,0,0.426224750532694,0,0,0,0,1.0429658368404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,2.26883561193763,3.54767035940102,1.66886092816939,0.0654895377488563,0.364295288292542,1.48313777113772,0,0,0,0,0,0,0,0.860234595106124,0,0,0.838998872419812,0.550236083880135,0.417989933073621,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0.17859945656816,0,0,0,0,0,0,0,0,0,0.633152558322899,0,0,0,0,2.1349799145941,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.491337269247072,0.206651562351531,0,0,0,0,0.336672227908132,0.250237039743928,0,0.438977620880838,0.30648779579902,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0,0.337552664482532,0.194874010322397,0,0.184099797284599,0,0,0,0,1.93260853163297,3.00020732649918,4.30206893083506,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0.658501712451753,0,0,0.370353780634118,0,0,2.88662684050547,0.695582429850461,0.587043471179108,0,0,0,0,0,0,0,0,0,2.51973192298289,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892144943985809,0.630809660135739,1.40569697991256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85051632563187,0.887808626565635,0.9033987161519,0.519254429183621,0.116210378459959,0,2.20557117333613,0,0,0,0,0,0.847168708148562,0,0,2.11103257785751,0,0.340187410553031,0.215915916102139,0,0,2.00675909541941,0.509752546090077,1.66215201785745,2.23874754722178,0,0,0,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0.165284915360978,0.192190067365106,1.14851441245126,0,0.464845549297286,0,0,0.616067160352178,0,0,0.18532421910392,0.286249773483982,0,0.316379424718726,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0.404364963146632,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.563391205064483,0,0,0,0,0,0,0,0,0.769776901804097,1.34060455107157,2.17781969722645,0,0.43050537267123,3.36942951335251,0,1.83778720165568,0,0,0,0,0,0,0,0,0.961416640147258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84136146806413,0,0,0,0,0,0.556543525114529,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0.19566461893209,0.485560759068186,0,0,0,0,0,0,0,0.330991955875499,0.941798755221676,0,0,0.693373365065693,0.347119476670262,0,0.0870592065804026,0.17472666824203,1.89184635718778,0,0,0,0.193978032976839,1.3238419003725,0,1.37041924646751,0,0,0,0,0,0,0,0,0,0,0.372757606696298,0.235694034616795,0,0.104602846312333,0,0.288950589901519,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0,1.19730191562487,0,0,0,0,1.32506888912221,0,0,0,2.81926008926669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79105763464249,0,0,0,0,0,0,0,0.777186002913902,0.295710299979268,1.11507737014592,0.449803112163605,3.10525913752519,0.414706207840855,0.797525143673985,2.08698024724694,0,0,0.406870733204662,1.09109195521536,3.00749559718968,0.928067519756987,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0.926404341482917,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70254786070051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0.762764190934334,0,0,0,0,0,0,0,1.77427303460454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25827217931095,0,0,0,0.111231401892069,0,0,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,0,0.473328002922261,0.170426809518315,0,1.14553434272025,0,0.955538938977433,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0.26721740526556,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0.224263725161227,0,0,0.217716747896961,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0.204000691244253,0,0,0,0.627713197974014,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0.726991193897824,0.755751887377619,1.21292030593908,0.232429036905685,0,0.619412741790207,0,0,0.236482229888585,0,0,0,0.188242339542605,0.272906150057846,0.449446968890169,0,0,0.639337125799041,0.329851300186716,0,0.426224750532694,0,0,0,0,1.0429658368404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,2.26883561193763,3.54767035940102,1.66886092816939,0.0654895377488563,0.364295288292542,1.48313777113772,0,0,0,0,0,0,0,0.860234595106124,0,0,0.838998872419812,0.550236083880135,0.417989933073621,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0.17859945656816,0,0,0,0,0,0,0,0,0,0.633152558322899,0,0,0,0,2.1349799145941,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.491337269247072,0.206651562351531,0,0,0,0,0.336672227908132,0.250237039743928,0,0.438977620880838,0.30648779579902,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0,0.337552664482532,0.194874010322397,0,0.184099797284599,0,0,0,0,1.93260853163297,3.00020732649918,4.30206893083506,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0.658501712451753,0,0,0.370353780634118,0,0,2.88662684050547,0.695582429850461,0.587043471179108,0,0,0,0,0,0,0,0,0,2.51973192298289,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892144943985809,0.630809660135739,1.40569697991256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85051632563187,0.887808626565635,0.9033987161519,0.519254429183621,0.116210378459959,0,2.20557117333613,0,0,0,0,0,0.847168708148562,0,0,2.11103257785751,0,0.340187410553031,0.215915916102139,0,0,2.00675909541941,0.509752546090077,1.66215201785745,2.23874754722178,0,0,0,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0.165284915360978,0.192190067365106,1.14851441245126,0,0.464845549297286,0,0,0.616067160352178,0,0,0.18532421910392,0.286249773483982,0,0.316379424718726,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0.404364963146632,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.563391205064483,0,0,0,0,0,0,0,0,0.769776901804097,1.34060455107157,2.17781969722645,0,0.43050537267123,3.36942951335251,0,1.83778720165568,0,0,0,0,0,0,0,0,0.961416640147258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84136146806413,0,0,0,0,0,0.556543525114529,0,0,0.996239941255349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0.19566461893209,0.485560759068186,0,0,0,0,0,0,0,0.330991955875499,0.941798755221676,0,0,0.693373365065693,0.347119476670262,0,0.0870592065804026,0.17472666824203,1.89184635718778,0,0,0,0.193978032976839,1.3238419003725,0,1.37041924646751,0,0,0,0,0,0,0,0,0,0,0.372757606696298,0.235694034616795,0,0.104602846312333,0,0.288950589901519,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0,1.19730191562487,0,0,0,0,1.32506888912221,0,0,0,2.81926008926669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79105763464249,0,0,0,0,0,0,0,0.777186002913902,0.295710299979268,1.11507737014592,0.449803112163605,3.10525913752519,0.414706207840855,0.797525143673985,2.08698024724694,0,0,0.406870733204662,1.09109195521536,3.00749559718968,0.928067519756987,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0.926404341482917,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70254786070051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0.762764190934334,0,0,0,0,0,0,0,1.77427303460454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25827217931095,0,0,0,0.111231401892069,0,0,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,0,0.473328002922261,0.170426809518315,0,1.14553434272025,0,0.955538938977433,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0.26721740526556,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0.224263725161227,0,0,0.217716747896961,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr14:75081670..75081682,- | |short_description=p@chr14:75081670..75081682,- | ||
}} | }} |
Latest revision as of 22:44, 24 July 2015
Short description: | p@chr14:75081670..75081682, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:75081670..75081682, - |
Coexpression cluster: | C3454_Gingival_Mallassezderived_Preadipocyte_Urothelial_mesenchymal_pleomorphic_Ciliary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.23e-15 | 3 |
ciliated cell | 2.31e-15 | 3 |
ciliated epithelial cell | 2.31e-15 | 3 |
multi-ciliated epithelial cell | 2.31e-15 | 3 |
non-pigmented ciliary epithelial cell | 2.31e-15 | 3 |
columnar/cuboidal epithelial cell | 4.51e-10 | 27 |
kidney tubule cell | 7.93e-08 | 10 |
nephron tubule epithelial cell | 7.93e-08 | 10 |
endo-epithelial cell | 1.22e-07 | 42 |
brush border epithelial cell | 2.72e-07 | 3 |
kidney cortex tubule cell | 2.72e-07 | 3 |
epithelial cell of proximal tubule | 2.72e-07 | 3 |
duct epithelial cell | 3.38e-07 | 3 |
branched duct epithelial cell | 3.38e-07 | 3 |
tracheal epithelial cell | 3.38e-07 | 3 |
tracheoblast | 3.38e-07 | 3 |
epithelial cell | 6.64e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.23e-15 | 3 |
ciliary epithelium | 2.31e-15 | 3 |
ciliary body | 2.31e-15 | 3 |
anterior segment of eyeball | 9.21e-12 | 14 |
atypical epithelium | 1.21e-11 | 4 |
pigment epithelium of eye | 8.65e-11 | 11 |
camera-type eye | 4.79e-08 | 20 |
simple eye | 4.79e-08 | 20 |
immature eye | 4.79e-08 | 20 |
ocular region | 4.79e-08 | 20 |
eyeball of camera-type eye | 4.79e-08 | 20 |
optic cup | 4.79e-08 | 20 |
optic vesicle | 4.79e-08 | 20 |
eye primordium | 4.79e-08 | 20 |
vasculature of eye | 6.68e-08 | 6 |
uvea | 6.68e-08 | 6 |
vasculature of head | 6.68e-08 | 6 |
nephron tubule epithelium | 7.93e-08 | 10 |
eye | 1.24e-07 | 21 |
visual system | 1.24e-07 | 21 |
renal cortex tubule | 2.72e-07 | 3 |
region of nephron tubule | 2.72e-07 | 3 |
proximal tubule | 2.72e-07 | 3 |
face | 2.95e-07 | 22 |
head | 8.81e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.05e-08 | 14 |