FFCP PHASE1:Hg19::chr13:111077159..111077201,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:111077159..111077201,- | |||
|coexpression_cluster_id=C823 | |coexpression_cluster_id=C823 | ||
|description=CAGE_peak_at_chr13:111077159..111077201,- | |description=CAGE_peak_at_chr13:111077159..111077201,- | ||
|id=chr13:111077159..111077201,- | |id=chr13:111077159..111077201,- | ||
|ontology_enrichment_celltype=CL:0000222!5.77e-18!119;CL:0000055!6.66e-17!180;CL:0002321!5.23e-12!248;CL:0000220!6.47e-12!246;CL:0000183!9.18e-10!59;CL:1000449!2.90e-09!16;CL:0000213!3.49e-09!57;CL:0000215!3.49e-09!57;CL:0000057!1.88e-08!75;CL:1000497!6.91e-08!18;CL:0002518!6.91e-08!18;CL:0000680!8.39e-08!57;CL:0000056!8.39e-08!57;CL:0000355!8.39e-08!57;CL:0000393!1.05e-07!60;CL:0000211!1.05e-07!60;CL:0002681!1.60e-07!13;CL:0002584!1.60e-07!13;CL:0000187!1.70e-07!54;CL:0002078!1.76e-07!44;CL:1000507!8.62e-07!12;CL:1000494!8.62e-07!12 | |ontology_enrichment_celltype=CL:0000222!5.77e-18!119;CL:0000055!6.66e-17!180;CL:0002321!5.23e-12!248;CL:0000220!6.47e-12!246;CL:0000183!9.18e-10!59;CL:1000449!2.90e-09!16;CL:0000213!3.49e-09!57;CL:0000215!3.49e-09!57;CL:0000057!1.88e-08!75;CL:1000497!6.91e-08!18;CL:0002518!6.91e-08!18;CL:0000680!8.39e-08!57;CL:0000056!8.39e-08!57;CL:0000355!8.39e-08!57;CL:0000393!1.05e-07!60;CL:0000211!1.05e-07!60;CL:0002681!1.60e-07!13;CL:0002584!1.60e-07!13;CL:0000187!1.70e-07!54;CL:0002078!1.76e-07!44;CL:1000507!8.62e-07!12;CL:1000494!8.62e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:1000449;8.19e-11;15!CL:0002681;8.31e-09;12!CL:0002584;8.31e-09;12!CL:1000497;1.09e-08;17!CL:0002518;1.09e-08;17!CL:1000507;2.02e-07;10!CL:1000494;2.02e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.21e-18,121;CL:1000449,7.43e-11,15;CL:0000213,1.19e-09,58;CL:0000215,1.19e-09,58;CL:0002321,5.39e-09,250;CL:0002681,7.51e-09,12;CL:0002584,7.51e-09,12;CL:1000497,1.00e-08,17;CL:0002518,1.00e-08,17;CL:0002078,9.32e-08,45;CL:1000507,1.88e-07,10;CL:1000494,1.88e-07,10;CL:0000680,2.36e-07,58;CL:0000056,2.36e-07,58;CL:0000355,2.36e-07,58;CL:0000187,5.27e-07,55;CL:0000115,5.78e-07,36;CL:0000393,8.09e-07,61;CL:0000211,8.09e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0006555;8.19e-11;15!UBERON:0004819;8.19e-11;15!UBERON:0001285;8.19e-11;15!UBERON:0007684;8.19e-11;15!UBERON:0001225;8.31e-09;12!UBERON:0008987;8.31e-09;12!UBERON:0000353;8.47e-09;15!UBERON:0004211;2.02e-07;10!UBERON:0009773;2.02e-07;10!UBERON:0001231;2.02e-07;10!UBERON:0004810;2.02e-07;10!UBERON:0003914;6.69e-07;74!UBERON:0001851;7.13e-07;15 | |||
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| ||
|short_description=p@chr13:111077159..111077201,- | |short_description=p@chr13:111077159..111077201,- | ||
}} | }} |
Latest revision as of 14:32, 24 July 2015
Short description: | p@chr13:111077159..111077201, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:111077159..111077201, - |
Coexpression cluster: | C823_Fibroblast_Endothelial_hepatic_Pericytes_umbilical_Adipocyte_Lymphatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.21e-18 | 121 |
epithelial cell of nephron | 7.43e-11 | 15 |
lining cell | 1.19e-09 | 58 |
barrier cell | 1.19e-09 | 58 |
embryonic cell | 5.39e-09 | 250 |
kidney cortical cell | 7.51e-09 | 12 |
renal cortical epithelial cell | 7.51e-09 | 12 |
kidney cell | 1.00e-08 | 17 |
kidney epithelial cell | 1.00e-08 | 17 |
meso-epithelial cell | 9.32e-08 | 45 |
kidney tubule cell | 1.88e-07 | 10 |
nephron tubule epithelial cell | 1.88e-07 | 10 |
muscle precursor cell | 2.36e-07 | 58 |
myoblast | 2.36e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.36e-07 | 58 |
muscle cell | 5.27e-07 | 55 |
endothelial cell | 5.78e-07 | 36 |
electrically responsive cell | 8.09e-07 | 61 |
electrically active cell | 8.09e-07 | 61 |