FFCP PHASE1:Hg19::chr12:122295630..122295641,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:122295630..122295641,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr12:122295630..122295641,+ | |description=CAGE_peak_at_chr12:122295630..122295641,+ | ||
|id=chr12:122295630..122295641,+ | |id=chr12:122295630..122295641,+ | ||
|ontology_enrichment_celltype=CL:0000181!6.51e-14!12;CL:0000417!6.51e-14!12;CL:0000668!6.51e-14!12;CL:0000414!6.51e-14!12;CL:0000412!6.51e-14!12;CL:0000182!6.51e-14!12;CL:0000764!4.42e-10!2;CL:0000765!4.42e-10!2;CL:0000050!4.42e-10!2;CL:0000038!4.42e-10!2;CL:0000558!4.42e-10!2;CL:0000547!4.42e-10!2;CL:0000549!4.42e-10!2;CL:0000550!4.42e-10!2;CL:0000552!4.42e-10!2 | |ontology_enrichment_celltype=CL:0000181!6.51e-14!12;CL:0000417!6.51e-14!12;CL:0000668!6.51e-14!12;CL:0000414!6.51e-14!12;CL:0000412!6.51e-14!12;CL:0000182!6.51e-14!12;CL:0000764!4.42e-10!2;CL:0000765!4.42e-10!2;CL:0000050!4.42e-10!2;CL:0000038!4.42e-10!2;CL:0000558!4.42e-10!2;CL:0000547!4.42e-10!2;CL:0000549!4.42e-10!2;CL:0000550!4.42e-10!2;CL:0000552!4.42e-10!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.95e-37;12!CL:0000319;1.25e-13;1!CL:0000159;1.87e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.98e-37,12;CL:0000319,7.55e-14,1;CL:0000159,1.45e-07,2;CL:0000223,2.06e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.24e-28;11!UBERON:0009497;6.85e-24;13!UBERON:0003104;3.69e-19;31!UBERON:0001041;2.37e-10;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;1.25e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,7.55e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0002107!4.83e-15!19;UBERON:0006925!4.83e-15!19;UBERON:0008836!4.83e-15!19;UBERON:0001896!3.57e-14!3;UBERON:0005290!3.57e-14!3;UBERON:0010096!3.57e-14!3;UBERON:0008835!8.36e-13!22;UBERON:0003894!8.36e-13!22;UBERON:0009854!3.46e-12!23;UBERON:0007499!4.20e-11!25;UBERON:0009497!4.20e-11!25;UBERON:0000015!4.20e-11!25;UBERON:0002423!4.20e-11!25;UBERON:0006235!4.20e-11!25;UBERON:0004161!4.20e-11!25;UBERON:0005057!1.27e-10!26;UBERON:0009856!1.27e-10!26;UBERON:0002365!1.08e-08!31;UBERON:0002330!1.08e-08!31;UBERON:0007023!2.38e-08!115;UBERON:0005172!3.03e-08!55;UBERON:0005173!3.03e-08!55;UBERON:0002368!1.51e-07!35;UBERON:0002417!3.20e-07!61;UBERON:0000916!3.20e-07!61 | |ontology_enrichment_uberon=UBERON:0002107!4.83e-15!19;UBERON:0006925!4.83e-15!19;UBERON:0008836!4.83e-15!19;UBERON:0001896!3.57e-14!3;UBERON:0005290!3.57e-14!3;UBERON:0010096!3.57e-14!3;UBERON:0008835!8.36e-13!22;UBERON:0003894!8.36e-13!22;UBERON:0009854!3.46e-12!23;UBERON:0007499!4.20e-11!25;UBERON:0009497!4.20e-11!25;UBERON:0000015!4.20e-11!25;UBERON:0002423!4.20e-11!25;UBERON:0006235!4.20e-11!25;UBERON:0004161!4.20e-11!25;UBERON:0005057!1.27e-10!26;UBERON:0009856!1.27e-10!26;UBERON:0002365!1.08e-08!31;UBERON:0002330!1.08e-08!31;UBERON:0007023!2.38e-08!115;UBERON:0005172!3.03e-08!55;UBERON:0005173!3.03e-08!55;UBERON:0002368!1.51e-07!35;UBERON:0002417!3.20e-07!61;UBERON:0000916!3.20e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.59e-41;19!UBERON:0006925;2.59e-41;19!UBERON:0002423;3.00e-31;25!UBERON:0002365;3.90e-24;31!UBERON:0002330;3.90e-24;31!UBERON:0002368;2.69e-21;33!UBERON:0000949;1.38e-15;43!UBERON:0005172;1.09e-14;52!UBERON:0005173;1.09e-14;52!UBERON:0002417;1.83e-11;58!UBERON:0000916;1.83e-11;58!UBERON:0002530;3.71e-08;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.04e-41,19;UBERON:0006925,3.04e-41,19;UBERON:0008836,3.04e-41,19;UBERON:0008835,1.55e-35,22;UBERON:0003894,1.55e-35,22;UBERON:0009854,5.78e-34,23;UBERON:0007499,3.39e-31,25;UBERON:0009497,3.39e-31,25;UBERON:0000015,3.39e-31,25;UBERON:0002423,3.39e-31,25;UBERON:0006235,3.39e-31,25;UBERON:0004161,3.39e-31,25;UBERON:0009856,5.69e-30,26;UBERON:0002365,4.99e-25,31;UBERON:0002330,4.99e-25,31;UBERON:0002368,4.35e-22,35;UBERON:0005172,7.12e-22,54;UBERON:0005173,7.12e-22,54;UBERON:0002417,1.42e-19,60;UBERON:0000916,1.42e-19,60;UBERON:0000949,5.13e-17,45;UBERON:0003929,4.73e-14,54;UBERON:0002530,8.58e-13,59;UBERON:0005177,3.79e-11,101;UBERON:0009569,6.23e-10,112;UBERON:0005911,5.68e-09,82;UBERON:0001041,2.08e-08,87 | |||
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| ||
|short_description=p@chr12:122295630..122295641,+ | |short_description=p@chr12:122295630..122295641,+ | ||
}} | }} |
Latest revision as of 06:01, 24 July 2015
Short description: | p@chr12:122295630..122295641, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:122295630..122295641, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.98e-37 | 12 |
mucus secreting cell | 7.55e-14 | 1 |
seromucus secreting cell | 1.45e-07 | 2 |
endodermal cell | 2.06e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 3.04e-41 | 19 |
digestive gland | 3.04e-41 | 19 |
liver bud | 3.04e-41 | 19 |
hepatic diverticulum | 1.55e-35 | 22 |
liver primordium | 1.55e-35 | 22 |
digestive tract diverticulum | 5.78e-34 | 23 |
epithelial sac | 3.39e-31 | 25 |
epithelium of foregut-midgut junction | 3.39e-31 | 25 |
anatomical boundary | 3.39e-31 | 25 |
hepatobiliary system | 3.39e-31 | 25 |
foregut-midgut junction | 3.39e-31 | 25 |
septum transversum | 3.39e-31 | 25 |
sac | 5.69e-30 | 26 |
exocrine gland | 4.99e-25 | 31 |
exocrine system | 4.99e-25 | 31 |
endocrine gland | 4.35e-22 | 35 |
abdomen element | 7.12e-22 | 54 |
abdominal segment element | 7.12e-22 | 54 |
abdominal segment of trunk | 1.42e-19 | 60 |
abdomen | 1.42e-19 | 60 |
endocrine system | 5.13e-17 | 45 |
gut epithelium | 4.73e-14 | 54 |
gland | 8.58e-13 | 59 |
trunk region element | 3.79e-11 | 101 |
subdivision of trunk | 6.23e-10 | 112 |
endo-epithelium | 5.68e-09 | 82 |
foregut | 2.08e-08 | 87 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 7.55e-14 | 1 |