FFCP PHASE1:Hg19::chr12:122277630..122277641,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:122277630..122277641,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr12:122277630..122277641,- | |description=CAGE_peak_at_chr12:122277630..122277641,- | ||
|id=chr12:122277630..122277641,- | |id=chr12:122277630..122277641,- | ||
|ontology_enrichment_celltype=CL:0000181!1.08e-21!12;CL:0000417!1.08e-21!12;CL:0000668!1.08e-21!12;CL:0000414!1.08e-21!12;CL:0000412!1.08e-21!12;CL:0000182!1.08e-21!12;CL:0000159!2.78e-15!2;CL:0000319!1.10e-08!1;CL:0000313!2.64e-08!1 | |ontology_enrichment_celltype=CL:0000181!1.08e-21!12;CL:0000417!1.08e-21!12;CL:0000668!1.08e-21!12;CL:0000414!1.08e-21!12;CL:0000412!1.08e-21!12;CL:0000182!1.08e-21!12;CL:0000159!2.78e-15!2;CL:0000319!1.10e-08!1;CL:0000313!2.64e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000182;6.10e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.89e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.68e-11;11!UBERON:0009497;1.04e-09;13 | |||
|ontology_enrichment_disease=DOID:3030!1.10e-08!1;DOID:178!2.13e-08!1;DOID:326!2.13e-08!1;DOID:3978!2.13e-08!1;DOID:3394!2.13e-08!1;DOID:5844!2.13e-08!1;DOID:2152!2.64e-08!1 | |ontology_enrichment_disease=DOID:3030!1.10e-08!1;DOID:178!2.13e-08!1;DOID:326!2.13e-08!1;DOID:3978!2.13e-08!1;DOID:3394!2.13e-08!1;DOID:5844!2.13e-08!1;DOID:2152!2.64e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.52e-24!19;UBERON:0006925!7.52e-24!19;UBERON:0008836!7.52e-24!19;UBERON:0008835!1.90e-20!22;UBERON:0003894!1.90e-20!22;UBERON:0009854!1.64e-19!23;UBERON:0007499!7.33e-18!25;UBERON:0009497!7.33e-18!25;UBERON:0000015!7.33e-18!25;UBERON:0002423!7.33e-18!25;UBERON:0006235!7.33e-18!25;UBERON:0004161!7.33e-18!25;UBERON:0005057!3.94e-17!26;UBERON:0009856!3.94e-17!26;UBERON:0002365!3.47e-14!31;UBERON:0002330!3.47e-14!31;UBERON:0002368!1.96e-12!35;UBERON:0005172!1.10e-11!55;UBERON:0005173!1.10e-11!55;UBERON:0001896!1.62e-10!3;UBERON:0005290!1.62e-10!3;UBERON:0010096!1.62e-10!3;UBERON:0002417!2.28e-10!61;UBERON:0000916!2.28e-10!61;UBERON:0000949!2.04e-09!45;UBERON:0001301!1.48e-08!1;UBERON:0004911!2.64e-08!1;UBERON:0002336!3.79e-08!1;UBERON:0001018!3.79e-08!1;UBERON:0002473!3.79e-08!1;UBERON:0005340!3.79e-08!1;UBERON:0002316!3.79e-08!1;UBERON:0003544!3.79e-08!1;UBERON:0001020!3.79e-08!1;UBERON:0005970!3.79e-08!1;UBERON:0002437!3.79e-08!1;UBERON:0002363!4.07e-08!1;UBERON:0007647!4.07e-08!1;UBERON:0010115!4.07e-08!1;UBERON:0003929!1.17e-07!54;UBERON:0002530!6.51e-07!59 | |ontology_enrichment_uberon=UBERON:0002107!7.52e-24!19;UBERON:0006925!7.52e-24!19;UBERON:0008836!7.52e-24!19;UBERON:0008835!1.90e-20!22;UBERON:0003894!1.90e-20!22;UBERON:0009854!1.64e-19!23;UBERON:0007499!7.33e-18!25;UBERON:0009497!7.33e-18!25;UBERON:0000015!7.33e-18!25;UBERON:0002423!7.33e-18!25;UBERON:0006235!7.33e-18!25;UBERON:0004161!7.33e-18!25;UBERON:0005057!3.94e-17!26;UBERON:0009856!3.94e-17!26;UBERON:0002365!3.47e-14!31;UBERON:0002330!3.47e-14!31;UBERON:0002368!1.96e-12!35;UBERON:0005172!1.10e-11!55;UBERON:0005173!1.10e-11!55;UBERON:0001896!1.62e-10!3;UBERON:0005290!1.62e-10!3;UBERON:0010096!1.62e-10!3;UBERON:0002417!2.28e-10!61;UBERON:0000916!2.28e-10!61;UBERON:0000949!2.04e-09!45;UBERON:0001301!1.48e-08!1;UBERON:0004911!2.64e-08!1;UBERON:0002336!3.79e-08!1;UBERON:0001018!3.79e-08!1;UBERON:0002473!3.79e-08!1;UBERON:0005340!3.79e-08!1;UBERON:0002316!3.79e-08!1;UBERON:0003544!3.79e-08!1;UBERON:0001020!3.79e-08!1;UBERON:0005970!3.79e-08!1;UBERON:0002437!3.79e-08!1;UBERON:0002363!4.07e-08!1;UBERON:0007647!4.07e-08!1;UBERON:0010115!4.07e-08!1;UBERON:0003929!1.17e-07!54;UBERON:0002530!6.51e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.14e-37;19!UBERON:0006925;2.14e-37;19!UBERON:0002423;1.47e-28;25!UBERON:0002365;4.67e-23;31!UBERON:0002330;4.67e-23;31!UBERON:0002368;6.02e-20;33!UBERON:0000949;1.93e-14;43!UBERON:0005172;2.04e-10;52!UBERON:0005173;2.04e-10;52!UBERON:0002417;4.35e-08;58!UBERON:0000916;4.35e-08;58!UBERON:0002530;1.32e-07;57!UBERON:0001007;1.80e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.06e-37,19;UBERON:0006925,2.06e-37,19;UBERON:0008836,2.06e-37,19;UBERON:0008835,2.17e-32,22;UBERON:0003894,2.17e-32,22;UBERON:0009854,5.24e-31,23;UBERON:0007499,1.43e-28,25;UBERON:0009497,1.43e-28,25;UBERON:0000015,1.43e-28,25;UBERON:0002423,1.43e-28,25;UBERON:0006235,1.43e-28,25;UBERON:0004161,1.43e-28,25;UBERON:0009856,1.71e-27,26;UBERON:0002365,3.84e-23,31;UBERON:0002330,3.84e-23,31;UBERON:0002368,1.49e-20,35;UBERON:0000949,4.39e-16,45;UBERON:0003929,1.81e-13,54;UBERON:0005172,1.81e-13,54;UBERON:0005173,1.81e-13,54;UBERON:0002530,2.34e-12,59;UBERON:0002417,3.71e-12,60;UBERON:0000916,3.71e-12,60;UBERON:0005911,5.61e-09,82;UBERON:0001041,1.78e-08,87;UBERON:0005177,2.47e-07,101 | |||
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|short_description=p@chr12:122277630..122277641,- | |short_description=p@chr12:122277630..122277641,- | ||
}} | }} |
Latest revision as of 06:01, 24 July 2015
Short description: | p@chr12:122277630..122277641, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:122277630..122277641, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.89e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.06e-37 | 19 |
digestive gland | 2.06e-37 | 19 |
liver bud | 2.06e-37 | 19 |
hepatic diverticulum | 2.17e-32 | 22 |
liver primordium | 2.17e-32 | 22 |
digestive tract diverticulum | 5.24e-31 | 23 |
epithelial sac | 1.43e-28 | 25 |
epithelium of foregut-midgut junction | 1.43e-28 | 25 |
anatomical boundary | 1.43e-28 | 25 |
hepatobiliary system | 1.43e-28 | 25 |
foregut-midgut junction | 1.43e-28 | 25 |
septum transversum | 1.43e-28 | 25 |
sac | 1.71e-27 | 26 |
exocrine gland | 3.84e-23 | 31 |
exocrine system | 3.84e-23 | 31 |
endocrine gland | 1.49e-20 | 35 |
endocrine system | 4.39e-16 | 45 |
gut epithelium | 1.81e-13 | 54 |
abdomen element | 1.81e-13 | 54 |
abdominal segment element | 1.81e-13 | 54 |
gland | 2.34e-12 | 59 |
abdominal segment of trunk | 3.71e-12 | 60 |
abdomen | 3.71e-12 | 60 |
endo-epithelium | 5.61e-09 | 82 |
foregut | 1.78e-08 | 87 |
trunk region element | 2.47e-07 | 101 |