FFCP PHASE1:Hg19::chr11:8857215..8857232,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6764 | |EntrezGene=6764 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11350 | |HGNC=11350 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENST00000529940_5end | |association_with_transcript=-1bp_to_ENST00000529940_5end | ||
|cluster_id=chr11:8857215..8857232,- | |||
|coexpression_cluster_id=C1007 | |coexpression_cluster_id=C1007 | ||
|description=CAGE_peak_17_at_ST5_5end | |description=CAGE_peak_17_at_ST5_5end | ||
|id=chr11:8857215..8857232,- | |id=chr11:8857215..8857232,- | ||
|ontology_enrichment_celltype=CL:0002541!9.45e-25!3;CL:0000349!2.64e-24!3;CL:0002577!2.64e-24!3;CL:0002536!7.90e-17!2;CL:0002537!4.75e-15!5 | |ontology_enrichment_celltype=CL:0002541!9.45e-25!3;CL:0000349!2.64e-24!3;CL:0002577!2.64e-24!3;CL:0002536!7.90e-17!2;CL:0002537!4.75e-15!5 | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.56e-83;19!CL:0002541;6.20e-41;3!CL:0002577;3.35e-40;3!CL:0002536;1.71e-27;2!CL:0002537;7.69e-25;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.66e-83,19;CL:0002541,5.80e-41,3;CL:0002577,3.35e-40,3;CL:0002536,1.83e-27,2;CL:0002537,8.01e-25,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.97e-14;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.69e-79!14;UBERON:0000158!2.69e-79!14;UBERON:0003124!1.17e-54!7;UBERON:0000478!2.00e-45!24;UBERON:0001987!1.05e-31!4;UBERON:0004340!1.05e-31!4;UBERON:0000305!2.42e-28!7;UBERON:0004871!8.58e-25!8;UBERON:0000476!9.45e-25!3;UBERON:0000920!9.45e-25!3;UBERON:0004923!6.55e-18!57 | |ontology_enrichment_uberon=UBERON:0005631!2.69e-79!14;UBERON:0000158!2.69e-79!14;UBERON:0003124!1.17e-54!7;UBERON:0000478!2.00e-45!24;UBERON:0001987!1.05e-31!4;UBERON:0004340!1.05e-31!4;UBERON:0000305!2.42e-28!7;UBERON:0004871!8.58e-25!8;UBERON:0000476!9.45e-25!3;UBERON:0000920!9.45e-25!3;UBERON:0004923!6.55e-18!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.53e-84;10!UBERON:0000158;1.53e-84;10!UBERON:0000478;3.49e-78;24!UBERON:0001987;8.50e-53;4!UBERON:0000305;1.37e-47;7!UBERON:0003124;6.20e-41;3!UBERON:0000920;6.20e-41;3!UBERON:0004923;6.74e-09;55!UBERON:0000077;4.20e-08;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.05e-134,14;UBERON:0000158,1.05e-134,14;UBERON:0003124,4.94e-92,7;UBERON:0000478,3.49e-78,24;UBERON:0001987,7.95e-53,4;UBERON:0004340,7.95e-53,4;UBERON:0000305,1.51e-47,7;UBERON:0004871,1.24e-41,8;UBERON:0000920,5.80e-41,3;UBERON:0004923,1.04e-27,66;UBERON:0000995,2.33e-10,21;UBERON:0005795,6.72e-10,22;UBERON:0003975,6.72e-10,22;UBERON:0004175,9.73e-09,25;UBERON:0000077,1.46e-07,29 | |||
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|short_description=p17@ST5 | |short_description=p17@ST5 | ||
}} | }} |
Latest revision as of 23:58, 24 September 2015
Short description: | p17@ST5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_ST5_5end |
Coexpression cluster: | C1007_amniotic_chorionic_Placental_Amniotic_placenta_rectal_umbilical |
Association with transcript: | -1bp_to_ENST00000529940_5end |
EntrezGene: | ST5 |
HGNC: | 11350 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.66e-83 | 19 |
chorionic membrane mesenchymal stem cell | 5.80e-41 | 3 |
placental epithelial cell | 3.35e-40 | 3 |
amniotic epithelial cell | 1.83e-27 | 2 |
amnion mesenchymal stem cell | 8.01e-25 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.05e-134 | 14 |
membranous layer | 1.05e-134 | 14 |
chorion | 4.94e-92 | 7 |
extraembryonic structure | 3.49e-78 | 24 |
placenta | 7.95e-53 | 4 |
allantois | 7.95e-53 | 4 |
amnion | 1.51e-47 | 7 |
somatic layer of lateral plate mesoderm | 1.24e-41 | 8 |
egg chorion | 5.80e-41 | 3 |
organ component layer | 1.04e-27 | 66 |
uterus | 2.33e-10 | 21 |
embryonic uterus | 6.72e-10 | 22 |
internal female genitalia | 6.72e-10 | 22 |
internal genitalia | 9.73e-09 | 25 |
mixed endoderm/mesoderm-derived structure | 1.46e-07 | 29 |