FFCP PHASE1:Hg19::chr11:69061594..69061635,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26579 | |EntrezGene=26579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7563 | |HGNC=7563 | ||
|TSSclassifier=strong | |||
|UniProt=Q96EZ4,F5H0B3 | |UniProt=Q96EZ4,F5H0B3 | ||
|association_with_transcript=0bp_to_ENST00000308946,ENST00000441339,ENST00000535407,ENST00000535653,ENST00000539691,ENST00000544008,NM_138768,uc001oov.2,uc001oow.2,uc001oox.2,uc009ysl.2_5end | |association_with_transcript=0bp_to_ENST00000308946,ENST00000441339,ENST00000535407,ENST00000535653,ENST00000539691,ENST00000544008,NM_138768,uc001oov.2,uc001oow.2,uc001oox.2,uc009ysl.2_5end | ||
|cluster_id=chr11:69061594..69061635,+ | |||
|coexpression_cluster_id=C2158 | |coexpression_cluster_id=C2158 | ||
|description=CAGE_peak_1_at_MYEOV_5end | |description=CAGE_peak_1_at_MYEOV_5end | ||
|id=chr11:69061594..69061635,+ | |id=chr11:69061594..69061635,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.53e-16!254 | |ontology_enrichment_celltype=CL:0000066!2.53e-16!254 | ||
|ontology_enrichment_celltype_v019=CL:1000497;1.62e-08;17!CL:0002518;1.62e-08;17!CL:1000507;5.82e-07;10!CL:1000494;5.82e-07;10!CL:1000449;9.22e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.07e-17,253;CL:1000497,1.64e-08,17;CL:0002518,1.64e-08,17;CL:0000076,3.01e-07,63;CL:0000223,4.28e-07,58;CL:1000507,5.88e-07,10;CL:1000494,5.88e-07,10;CL:1000449,9.32e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.87e-14!143;DOID:305!5.80e-14!106;DOID:1749!2.43e-09!14;DOID:162!5.29e-09!235;DOID:14566!1.12e-08!239;DOID:299!2.16e-08!25 | |ontology_enrichment_disease=DOID:0050687!1.87e-14!143;DOID:305!5.80e-14!106;DOID:1749!2.43e-09!14;DOID:162!5.29e-09!235;DOID:14566!1.12e-08!239;DOID:299!2.16e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.72e-12;14!DOID:299;4.62e-12;25 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,8.62e-18,143;DOID:305,3.95e-17,106;DOID:1749,1.41e-12,14;DOID:299,5.18e-12,25;DOID:162,4.34e-10,235;DOID:14566,4.80e-10,239 | |||
|ontology_enrichment_uberon=UBERON:0000926!5.63e-08!448;UBERON:0004120!5.63e-08!448;UBERON:0006603!5.63e-08!448;UBERON:0001008!9.61e-08!45;UBERON:0003886!1.21e-07!63;UBERON:0006554!1.52e-07!44;UBERON:0000466!2.35e-07!126;UBERON:0004119!3.67e-07!169;UBERON:0000925!3.67e-07!169;UBERON:0006595!3.67e-07!169;UBERON:0000464!3.95e-07!104;UBERON:0002113!5.53e-07!27;UBERON:0003918!5.53e-07!27;UBERON:0005095!5.53e-07!27;UBERON:0007687!5.53e-07!27 | |ontology_enrichment_uberon=UBERON:0000926!5.63e-08!448;UBERON:0004120!5.63e-08!448;UBERON:0006603!5.63e-08!448;UBERON:0001008!9.61e-08!45;UBERON:0003886!1.21e-07!63;UBERON:0006554!1.52e-07!44;UBERON:0000466!2.35e-07!126;UBERON:0004119!3.67e-07!169;UBERON:0000925!3.67e-07!169;UBERON:0006595!3.67e-07!169;UBERON:0000464!3.95e-07!104;UBERON:0002113!5.53e-07!27;UBERON:0003918!5.53e-07!27;UBERON:0005095!5.53e-07!27;UBERON:0007687!5.53e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0002113;3.28e-08;24!UBERON:0011143;3.28e-08;24!UBERON:0004211;5.82e-07;10!UBERON:0009773;5.82e-07;10!UBERON:0001231;5.82e-07;10!UBERON:0004810;5.82e-07;10!UBERON:0006554;8.73e-07;30!UBERON:0001008;8.73e-07;30!UBERON:0006555;9.22e-07;15!UBERON:0004819;9.22e-07;15!UBERON:0001285;9.22e-07;15!UBERON:0007684;9.22e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,4.62e-09,101;UBERON:0002113,2.60e-08,26;UBERON:0003918,2.60e-08,26;UBERON:0011143,2.60e-08,26;UBERON:0005095,2.60e-08,26;UBERON:0007687,2.60e-08,26;UBERON:0006555,2.37e-07,16;UBERON:0004819,2.37e-07,16;UBERON:0004810,5.88e-07,10;UBERON:0004211,9.32e-07,15;UBERON:0009773,9.32e-07,15;UBERON:0001231,9.32e-07,15;UBERON:0001285,9.32e-07,15;UBERON:0007684,9.32e-07,15;UBERON:0004208,9.32e-07,15 | |||
|phase1_expression=0,0.856402095563933,0,1.0007329835313,0.446961094427288,0,0,0,0,2.7030733015166,6.28021051175185,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0.816002764977012,0,0.286235987131057,0.136874425072884,0.376627918784408,0,0,0.0787107813136792,1.57345710739562,0.383829398097213,0.154816123316076,0.919421224478927,0,0,0.542270404062111,0.142169232487422,0,1.10799081706375,0,0,0,0,0,0,0,0,1.39457422143411,1.23350366406548,2.16794459626573,0.575384784644301,0.512321413058201,0.47296445977717,1.72372840368309,1.29096936716765,1.35426486594342,0.941211697713023,0.272906150057846,0.674170453335254,3.06083892370903,1.92557416245656,0.639337125799041,0,0.398927315243264,0,7.2552309657146,7.94339314567596,8.09668923694247,0.251248665256743,0,0.434377689410233,3.63239701580021,3.68277635987565,5.06339819905415,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0.853460445133014,0,0,0,0.954053754535364,0,0.587237189370939,0.382273228125229,1.32171328579026,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0,0.263504357079378,0,0.364295288292542,0,0,0,0,0,0,0,4.96906018416763,5.16140757063675,8.67851254018986,6.78369530308812,2.09749718104953,0,1.25396979922086,0.775250277507987,2.49036383880697,0.66944122552934,1.20848795132744,4.56163263431108,0,0.735326160691737,0,2.58969212023831,2.02076435363553,4.61707069981621,3.06633274931766,1.89853131913626,3.66403487860815,0,3.87780264148325,0,0,0.25326102332916,0.662045904066094,0.286836620748814,1.77334191099179,0.560677600142307,1.06748995729705,0,0,0.404132016209064,0.163461903113459,0,0,0,0,1.1409436430889,0.149448680551801,1.17434498643765,1.61872944368132,0.842704840213491,0.816616685019573,2.82518929817066,0.103325781175765,0,0,0.910161361938026,2.87447256726495,1.5150250255866,3.37820003654303,1.6623846929051,0.877955241761676,2.45190236639216,0.150238058906597,0,0.717558542755448,0,0,0.300091096084402,0.206105058476878,0,0,0.168776332241266,0,0,0,0.161646056818812,0,0.201504196455281,1.01736355386293,1.54608682530637,2.72746120590835,0.286804595389004,0.365921118388786,0.397589304964456,0.464775771478074,1.34759371519982,0.756962552626885,0.72995471815166,1.56449532329816,0.643240938192885,4.14404764057442,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.55146986366197,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,1.15424147083917,0,1.40241773803446,0,0,1.26755034821831,0,1.18157981336281,0,5.28850285735388,0,2.08525542276389,2.24803506515239,0.100528972411631,0,0,1.03993478527958,0,0,0,0.721832238805369,0.462985512576611,0,3.1608175918371,3.43394464837949,0.984868024349589,5.14809383306323,3.41851673264075,14.0600750980165,3.69560682037491,10.633132293179,0.0895585227028483,0,0.383382679165211,0,0,0.621984346622316,1.15295962733569,0.25248486685276,0.126995788584338,2.67391897890794,1.17217447210047,5.13217338068116,5.2442021278695,0.300343057843917,2.5724378936752,0.784917590417525,0,0.7333828582095,0,0,0,0,1.04007436911366,0.771622122786426,1.41849132023278,1.3321108950805,0.142977993658148,0,0,1.30294473717494,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0.239624855491583,0,0,0.868687840005475,0,0.537182889719687,0,0.394061520403854,0,0,0,0,0,0,0,0,0,2.07207756718018,0,0.500170521059677,0.542530047399471,0.207970861530807,0.713715955188647,0.315404830067869,2.6942525448324,0.300946099727719,0,1.03473071292505,0,0.368738337083406,0.260650843404249,1.17480694477644,0,0.206768026122887,0,0.426910231213777,0.303127571446259,0,0,0.496215615637554,0,0,0.128139149255701,0.511707249066704,0.64341568457443,0,2.62156479464514,0.355123450626254,0.492762936082855,1.03850885836724,0.813472649219715,1.32945394550784,0.200506470303285,2.76242966807689,0.114814448164607,2.54927635209404,0,40.6079651616671,23.1816164684288,6.27479815341484,11.6911379722609,5.27758144464378,2.27466768141793,2.55140557914773,0.431831832204279,0,0.812839312631559,2.50844886927427,23.9583696662336,40.7227244375075,22.1636007174957,0,0,0.256450125116389,0.656029291399411,0.650756789328606,0.206082023295445,0,0,0.574265537996172,0,0,0.290012154876366,0.308097234229289,0.460511024178389,2.06754858726796,0,0,0.681813019328807,0,0.661139661443912,1.15314040419064,0.510450849978337,0.708104465988849,1.39453664789186,1.25924938732256,0,0.308033580176089,1.59691809095107,0.869932992075073,0.37064843820784,0.286249773483982,0,0.949138274156178,0,0.767693373934002,0,0.318203247925937,0,0.179872457583315,0,0,0.202182481573316,0,0,0,2.19342140668156,0,0.272999822815972,0.141405431953713,1.13008116620243,0,0.66343897524122,0.438450885253763,0,3.9353685122798,0.811641507850816,0.92947049429925,3.3803472303869,0.286822704408103,0,1.07001315444375,0,0,0,0,1.74967360122491,0.0962221127255121,3.35151137767894,1.08890984861323,0.188287601553558,0.86101074534246,1.68471475667626,1.33029046061003,0.459446800413919,10.1489521846434,9.1756464857085,12.53223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| ||
|short_description=p1@MYEOV | |short_description=p1@MYEOV | ||
}} | }} |
Latest revision as of 21:05, 19 September 2015
Short description: | p1@MYEOV |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYEOV_5end |
Coexpression cluster: | C2158_peripheral_renal_neuroblastoma_tubular_squamous_neuroectodermal_epidermoid |
Association with transcript: | 0bp_to_ENST00000308946, ENST00000441339, ENST00000535407, ENST00000535653, ENST00000539691, ENST00000544008, NM_138768, uc001oov.2, uc001oow.2, uc001oox.2, uc009ysl.2_5end |
EntrezGene: | MYEOV |
HGNC: | 7563 |
UniProt: | Q96EZ4F5H0B3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.07e-17 | 253 |
kidney cell | 1.64e-08 | 17 |
kidney epithelial cell | 1.64e-08 | 17 |
squamous epithelial cell | 3.01e-07 | 63 |
endodermal cell | 4.28e-07 | 58 |
kidney tubule cell | 5.88e-07 | 10 |
nephron tubule epithelial cell | 5.88e-07 | 10 |
epithelial cell of nephron | 9.32e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 4.62e-09 | 101 |
kidney | 2.60e-08 | 26 |
kidney mesenchyme | 2.60e-08 | 26 |
upper urinary tract | 2.60e-08 | 26 |
kidney rudiment | 2.60e-08 | 26 |
kidney field | 2.60e-08 | 26 |
excretory tube | 2.37e-07 | 16 |
kidney epithelium | 2.37e-07 | 16 |
nephron tubule epithelium | 5.88e-07 | 10 |
nephron epithelium | 9.32e-07 | 15 |
renal tubule | 9.32e-07 | 15 |
nephron tubule | 9.32e-07 | 15 |
nephron | 9.32e-07 | 15 |
uriniferous tubule | 9.32e-07 | 15 |
nephrogenic mesenchyme | 9.32e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 8.62e-18 | 143 |
carcinoma | 3.95e-17 | 106 |
squamous cell carcinoma | 1.41e-12 | 14 |
adenocarcinoma | 5.18e-12 | 25 |
cancer | 4.34e-10 | 235 |
disease of cellular proliferation | 4.80e-10 | 239 |