FFCP PHASE1:Hg19::chr11:2153201..2153247,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |EntrezGene=3481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5466 | |HGNC=5466 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=37bp_to_AK074614_5end | |association_with_transcript=37bp_to_AK074614_5end | ||
|cluster_id=chr11:2153201..2153247,+ | |||
|coexpression_cluster_id=C172 | |coexpression_cluster_id=C172 | ||
|description=CAGE_peak_18_at_IGF2_5end | |description=CAGE_peak_18_at_IGF2_5end | ||
|id=chr11:2153201..2153247,+ | |id=chr11:2153201..2153247,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.35e-15;19!CL:0002537;7.10e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.17e-15,19;CL:0002537,6.42e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!2.82e-15!347;UBERON:0005631!3.37e-12!14;UBERON:0000158!3.37e-12!14;UBERON:0007023!2.41e-11!115;UBERON:0000119!4.25e-11!312;UBERON:0000483!1.83e-10!309;UBERON:0000475!4.42e-10!365;UBERON:0002616!2.19e-09!59;UBERON:0000478!2.55e-09!24;UBERON:0000468!3.07e-09!659;UBERON:0000922!1.30e-08!612;UBERON:0003075!1.46e-08!86;UBERON:0007284!1.46e-08!86;UBERON:0000955!2.91e-08!69;UBERON:0006238!2.91e-08!69;UBERON:0001049!5.99e-08!57;UBERON:0005068!5.99e-08!57;UBERON:0006241!5.99e-08!57;UBERON:0007135!5.99e-08!57;UBERON:0002346!6.11e-08!90;UBERON:0000064!1.16e-07!219;UBERON:0002050!2.33e-07!605;UBERON:0005423!2.33e-07!605;UBERON:0000153!2.68e-07!129;UBERON:0007811!2.68e-07!129;UBERON:0004119!3.05e-07!169;UBERON:0000925!3.05e-07!169;UBERON:0006595!3.05e-07!169;UBERON:0005256!3.81e-07!143;UBERON:0000923!4.79e-07!604;UBERON:0005291!4.79e-07!604;UBERON:0006598!4.79e-07!604;UBERON:0002532!4.79e-07!604;UBERON:0001017!5.01e-07!82;UBERON:0005743!5.31e-07!86;UBERON:0003124!5.42e-07!7;UBERON:0000477!8.19e-07!286;UBERON:0000305!8.31e-07!7;UBERON:0000033!9.38e-07!123 | |ontology_enrichment_uberon=UBERON:0000481!2.82e-15!347;UBERON:0005631!3.37e-12!14;UBERON:0000158!3.37e-12!14;UBERON:0007023!2.41e-11!115;UBERON:0000119!4.25e-11!312;UBERON:0000483!1.83e-10!309;UBERON:0000475!4.42e-10!365;UBERON:0002616!2.19e-09!59;UBERON:0000478!2.55e-09!24;UBERON:0000468!3.07e-09!659;UBERON:0000922!1.30e-08!612;UBERON:0003075!1.46e-08!86;UBERON:0007284!1.46e-08!86;UBERON:0000955!2.91e-08!69;UBERON:0006238!2.91e-08!69;UBERON:0001049!5.99e-08!57;UBERON:0005068!5.99e-08!57;UBERON:0006241!5.99e-08!57;UBERON:0007135!5.99e-08!57;UBERON:0002346!6.11e-08!90;UBERON:0000064!1.16e-07!219;UBERON:0002050!2.33e-07!605;UBERON:0005423!2.33e-07!605;UBERON:0000153!2.68e-07!129;UBERON:0007811!2.68e-07!129;UBERON:0004119!3.05e-07!169;UBERON:0000925!3.05e-07!169;UBERON:0006595!3.05e-07!169;UBERON:0005256!3.81e-07!143;UBERON:0000923!4.79e-07!604;UBERON:0005291!4.79e-07!604;UBERON:0006598!4.79e-07!604;UBERON:0002532!4.79e-07!604;UBERON:0001017!5.01e-07!82;UBERON:0005743!5.31e-07!86;UBERON:0003124!5.42e-07!7;UBERON:0000477!8.19e-07!286;UBERON:0000305!8.31e-07!7;UBERON:0000033!9.38e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;6.43e-15;24!UBERON:0005631;7.54e-13;10!UBERON:0000158;7.54e-13;10!UBERON:0000922;1.37e-09;49!UBERON:0000305;1.95e-09;7!UBERON:0002107;1.39e-07;19!UBERON:0006925;1.39e-07;19!UBERON:0005409;2.19e-07;22!UBERON:0000160;3.23e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.33e-17,14;UBERON:0000158,1.33e-17,14;UBERON:0000478,5.71e-15,24;UBERON:0003124,9.23e-10,7;UBERON:0000305,1.75e-09,7;UBERON:0003104,5.08e-09,160;UBERON:0009142,5.08e-09,160;UBERON:0004871,4.42e-08,8;UBERON:0002107,1.28e-07,19;UBERON:0006925,1.28e-07,19;UBERON:0008836,1.28e-07,19;UBERON:0000160,4.29e-07,17;UBERON:0011216,5.74e-07,223;UBERON:0005409,7.14e-07,25 | |||
|phase1_expression=0.908391896352783,0.642301571672949,0.281908808191942,3.00219895059391,2.68176656656373,10.4680622892044,0,0,0,0.982935746006035,1.39560233594486,59.634494591537,97.5937819445278,1.36142988256051,5.96515276310248,0,0,0,0,1.10808952269109,7.14002419354885,4.07491137921514,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,2.89693037921647,0,0,0.567208902984407,0.221729397462564,1.31752178539689,0.392937226493138,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0.516833518338658,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.366403487860815,0,0,0.436094052142534,0,0,0,0,0,1.68203280042692,1.06748995729705,0.24666754841716,0,0.269421344139376,0,5.90293967815232,23.62321290368,0.468642863667593,0,0,0,0,0,0,0,0.368502951935304,0,0,5.68713937340681,0,0,0.336672227908132,1.00094815897571,0,0.877955241761676,0,1.05166641234618,0.453728732640084,0,0.640672166455702,0,0,0,0,0,0,0,0,0,0.80823028409406,0,0,0.169560592310488,0,0,0,0,0,5.46111531486736,3.00617059544574,1.26160425437814,0,0,0,0,17.6459812652152,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,8.82052268313252,13.9430538304014,6.87979051674338,14.7697476670351,0,42.4310112973742,0,0,0,0,0.555530670951178,0.325808305310325,0,0,0.463721619900307,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,8.28324130783232,0.22001485746285,0,0,0,1.59562869950922,6.24044621468197,0.514414748524284,1.41849132023278,1.8649552531127,6.86294369559108,66.1998358577561,7.40916303102692,0,1.42156779497018,5.543663110534,0,0,0.099972991182057,0,0,0,0,0,0,0.868687840005475,4.10952645100767,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,7.36148950314839,30.0102312635806,6.78162559249339,6.86303843051664,8.92144943985809,4.57337003598411,5.15422225967938,0,0,0,0,1.10621501125022,0,67.5513993246455,167.797134243509,0,0,0,10.9125925720653,26.6296703216795,88.902746238926,0,0.767309866440312,1.40330047216537,0,2.55853624533352,0.804269605718038,4.45254199334973,0,0,0,0.519254429183621,0,31.665175793005,0.200506470303285,0.460404944679482,1.37777337797528,2.54927635209404,2.75361271414791,0,1.07821471946181,0,0,0.316654886678627,0,0.340187410553031,1.94324324491925,12.3381802152231,4.33514300070165,3.51182841698397,0,0,0,0,0.522870902049801,0,0.328014645699706,0,5.87333766392017,0.0915694648183434,0,0,0,0,1.25671933779759,0.462145851343933,1.07452572308291,1.24052915236078,0.214840489736547,1.16013355131383,1.02271952899321,35.3457181517547,0.661139661443912,0.576570202095319,0.255225424989168,0.6069466851333,0.464845549297286,0.62962469366128,0.6970372701606,0,0,0,0,0.143124886741991,0.744316738719335,4.11293252134344,2.09693213316207,0.511795582622668,2.99557291623744,0,0,2.15846949099978,1.37268514868027,1.06031162111118,0,0,0,3.90106991271672,0,0,6.14249601335936,0.424216295861138,0,0,0,0,0,0,0,0.30982349809975,0,1.43411352204052,3.04572027140676,0,0,0,0,0.75894634753143,2.44954304171488,0.192444225451024,0.670302275535787,0,5.46034044505319,3.87454835404107,1.68471475667626,8.42517291719684,5.28363820476007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,1.23087398947712,0,0,0,0,1.02555725490326,0.121360521749513,0,1.42068073403207,63.9835219097009,34.4479029765861,93.6840141402658,0.994147647766298,0.140669416410513,0,0,7.60051469260776,2.19172787076177,0,0,0,0,0,0,0,0,0.690503839458535,0,0,0.969332746095218,0.463840490809256,0,0,0,0.724999575434793,0.1137934482855,0,0,0.689486746482929,0,0,9.74315524395223,0.241192877250816,0,0,0.886642856860642,0,0,0,1.61595542857974,0,5.99466151408956,0,0,84.5353073289587,3.93869651628008,362.463647692672,0,0,0,0,0,0.167821586975843,0,0,0,0,3.1097675715467,0,0,0.530745387020035,8.55442202907076,0,0,0,0.202203398942031,97.1118953231534,0,0,0,0,0.394584402849391,49.6061935799522,1.83643656978294,3.34888872030986,0,0,0.664653872707185,0,0,0,0,0,0,0,0,1.7472666824203,0,0,0,0,0.678923115418936,0,24.179939263517,0,0,0.443175571691151,0.391102765469606,0,0.640358984218058,47.7544966901291,0,0,138.133973278881,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.558564802544508,4.12488763221031,0.717873024576814,3.19486400798386,1.28767814440971,0,7.99483322592043,0,0,27.0226315313777,20.8512121704351,22.5127836472978,24.0163054895987,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.242998226632099,0,0.472834243795189,2.93745693555989,0.105600336519406,0,0,6.4322579373603,2.64836788146173,0,0,0,0,0,0,0,0.566560457600628,3.81035807563014,96.7300289059216,0,0.13223260174269,0,0,0,2.04365596629566,0.414239055347196,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0.250381861413,12.0415931094915,0.665574309221114,0.434674820589684,0,0.499921631848426,0,0,1.17632909849086,0,0.28984205722165,0,0,0,0,0.25156790175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| ||
|short_description=p18@IGF2 | |short_description=p18@IGF2 | ||
}} | }} |
Latest revision as of 07:42, 17 September 2015
Short description: | p18@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 37bp_to_AK074614_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.17e-15 | 19 |
amnion mesenchymal stem cell | 6.42e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.33e-17 | 14 |
membranous layer | 1.33e-17 | 14 |
extraembryonic structure | 5.71e-15 | 24 |
chorion | 9.23e-10 | 7 |
amnion | 1.75e-09 | 7 |
mesenchyme | 5.08e-09 | 160 |
entire embryonic mesenchyme | 5.08e-09 | 160 |
somatic layer of lateral plate mesoderm | 4.42e-08 | 8 |
liver | 1.28e-07 | 19 |
digestive gland | 1.28e-07 | 19 |
liver bud | 1.28e-07 | 19 |
intestine | 4.29e-07 | 17 |
organ system subdivision | 5.74e-07 | 223 |
gastrointestinal system | 7.14e-07 | 25 |