FFCP PHASE1:Hg19::chr10:4958463..4958491,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389932 | |EntrezGene=389932 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_026743,uc001ihm.3_5end | |association_with_transcript=0bp_to_NR_026743,uc001ihm.3_5end | ||
|cluster_id=chr10:4958463..4958491,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_tAKR_5end | |description=CAGE_peak_1_at_tAKR_5end | ||
|id=chr10:4958463..4958491,- | |id=chr10:4958463..4958491,- | ||
|ontology_enrichment_celltype=CL:0000181!3.15e-14!12;CL:0000417!3.15e-14!12;CL:0000668!3.15e-14!12;CL:0000414!3.15e-14!12;CL:0000412!3.15e-14!12;CL:0000182!3.15e-14!12;CL:0002623!2.79e-07!3 | |ontology_enrichment_celltype=CL:0000181!3.15e-14!12;CL:0000417!3.15e-14!12;CL:0000668!3.15e-14!12;CL:0000414!3.15e-14!12;CL:0000412!3.15e-14!12;CL:0000182!3.15e-14!12;CL:0002623!2.79e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;9.03e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.03e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.83e-11;11!UBERON:0009497;1.08e-09;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!8.38e-25!26;UBERON:0002107!6.79e-24!19;UBERON:0006925!6.79e-24!19;UBERON:0008836!6.79e-24!19;UBERON:0002365!7.55e-21!31;UBERON:0002330!7.55e-21!31;UBERON:0008835!1.15e-20!22;UBERON:0003894!1.15e-20!22;UBERON:0009854!8.93e-20!23;UBERON:0002368!2.01e-18!35;UBERON:0007499!3.30e-18!25;UBERON:0009497!3.30e-18!25;UBERON:0000015!3.30e-18!25;UBERON:0002423!3.30e-18!25;UBERON:0006235!3.30e-18!25;UBERON:0004161!3.30e-18!25;UBERON:0009856!1.63e-17!26;UBERON:0002530!1.17e-14!59;UBERON:0000949!2.59e-14!45;UBERON:0003929!6.57e-12!54;UBERON:0001041!1.09e-08!98;UBERON:0005172!2.53e-08!55;UBERON:0005173!2.53e-08!55;UBERON:0003408!4.50e-08!10;UBERON:0005911!8.81e-08!82;UBERON:0002417!1.66e-07!61;UBERON:0000916!1.66e-07!61 | |ontology_enrichment_uberon=UBERON:0005057!8.38e-25!26;UBERON:0002107!6.79e-24!19;UBERON:0006925!6.79e-24!19;UBERON:0008836!6.79e-24!19;UBERON:0002365!7.55e-21!31;UBERON:0002330!7.55e-21!31;UBERON:0008835!1.15e-20!22;UBERON:0003894!1.15e-20!22;UBERON:0009854!8.93e-20!23;UBERON:0002368!2.01e-18!35;UBERON:0007499!3.30e-18!25;UBERON:0009497!3.30e-18!25;UBERON:0000015!3.30e-18!25;UBERON:0002423!3.30e-18!25;UBERON:0006235!3.30e-18!25;UBERON:0004161!3.30e-18!25;UBERON:0009856!1.63e-17!26;UBERON:0002530!1.17e-14!59;UBERON:0000949!2.59e-14!45;UBERON:0003929!6.57e-12!54;UBERON:0001041!1.09e-08!98;UBERON:0005172!2.53e-08!55;UBERON:0005173!2.53e-08!55;UBERON:0003408!4.50e-08!10;UBERON:0005911!8.81e-08!82;UBERON:0002417!1.66e-07!61;UBERON:0000916!1.66e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.50e-37;19!UBERON:0006925;3.50e-37;19!UBERON:0002423;2.13e-28;25!UBERON:0002365;6.25e-23;31!UBERON:0002330;6.25e-23;31!UBERON:0002368;8.15e-20;33!UBERON:0000949;2.30e-14;43!UBERON:0005172;2.32e-10;52!UBERON:0005173;2.32e-10;52!UBERON:0002417;5.06e-08;58!UBERON:0000916;5.06e-08;58!UBERON:0002530;1.48e-07;57!UBERON:0001007;1.94e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.50e-37,19;UBERON:0006925,3.50e-37,19;UBERON:0008836,3.50e-37,19;UBERON:0008835,3.42e-32,22;UBERON:0003894,3.42e-32,22;UBERON:0009854,8.10e-31,23;UBERON:0007499,2.13e-28,25;UBERON:0009497,2.13e-28,25;UBERON:0000015,2.13e-28,25;UBERON:0002423,2.13e-28,25;UBERON:0006235,2.13e-28,25;UBERON:0004161,2.13e-28,25;UBERON:0009856,2.51e-27,26;UBERON:0002365,5.30e-23,31;UBERON:0002330,5.30e-23,31;UBERON:0002368,1.98e-20,35;UBERON:0000949,5.48e-16,45;UBERON:0003929,2.18e-13,54;UBERON:0005172,2.18e-13,54;UBERON:0005173,2.18e-13,54;UBERON:0002530,2.77e-12,59;UBERON:0002417,4.38e-12,60;UBERON:0000916,4.38e-12,60;UBERON:0005911,6.33e-09,82;UBERON:0001041,1.99e-08,87;UBERON:0005177,2.72e-07,101 | |||
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|short_description=p1@tAKR | |short_description=p1@tAKR | ||
}} | }} |
Latest revision as of 09:01, 18 September 2015
Short description: | p1@tAKR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_tAKR_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_NR_026743, uc001ihm.3_5end |
EntrezGene: | tAKR |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.03e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.50e-37 | 19 |
digestive gland | 3.50e-37 | 19 |
liver bud | 3.50e-37 | 19 |
hepatic diverticulum | 3.42e-32 | 22 |
liver primordium | 3.42e-32 | 22 |
digestive tract diverticulum | 8.10e-31 | 23 |
epithelial sac | 2.13e-28 | 25 |
epithelium of foregut-midgut junction | 2.13e-28 | 25 |
anatomical boundary | 2.13e-28 | 25 |
hepatobiliary system | 2.13e-28 | 25 |
foregut-midgut junction | 2.13e-28 | 25 |
septum transversum | 2.13e-28 | 25 |
sac | 2.51e-27 | 26 |
exocrine gland | 5.30e-23 | 31 |
exocrine system | 5.30e-23 | 31 |
endocrine gland | 1.98e-20 | 35 |
endocrine system | 5.48e-16 | 45 |
gut epithelium | 2.18e-13 | 54 |
abdomen element | 2.18e-13 | 54 |
abdominal segment element | 2.18e-13 | 54 |
gland | 2.77e-12 | 59 |
abdominal segment of trunk | 4.38e-12 | 60 |
abdomen | 4.38e-12 | 60 |
endo-epithelium | 6.33e-09 | 82 |
foregut | 1.99e-08 | 87 |
trunk region element | 2.72e-07 | 101 |