Coexpression cluster:C4613: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{Coexpression_clusters | {{Coexpression_clusters|coexpression_dpi_cluster_scores_median=0.576211373760844,0.649969377439161,0.659751498438814,0.438867195819948,0.462840045210498,0.380509666786114,0.27015619639452,0.74733185839401,0.2522622326437,0.163753386244187,-0.152976191689497,0.206550951130347,0.100192360823115,0.656295212633229,0.881910702170764,0.0920458074612316,0.190509023425118,0.436240580714765,0.247814639809943,0.382197009916414,0.768399398948562,0.418146995493475,0.0394000303826287,0.0968154785741748,0.372415580153347,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.152976191689497,-0.0358268316677233,-0.157182883491893,0.126603555415493,-0.157182883491893,-0.120572133110829,-0.157182883491893,-0.157182883491893,-0.152976191689497,-0.152976191689497,-0.157182883491893,-0.0694314577891702,-0.157182883491893,-0.0722111176484921,-0.0463251119000323,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.152976191689497,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.0649381460382394,-0.157182883491893,-0.152976191689497,-0.157182883491893,-0.157182883491893,-0.152976191689497,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.152976191689497,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,7.93112265734253e-05,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.152976191689497,-0.152976191689497,-0.0783938821195494,-0.0801147580290476,-0.135919007235712,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.152976191689497,-0.157182883491893,-0.152976191689497,-0.157182883491893,-0.157182883491893,-0.12639648771905,-0.157182883491893,-0.152976191689497,-0.157182883491893,-0.152976191689497,-0.152976191689497,-0.0759791041995758,-0.157182883491893,-0.152976191689497,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.152976191689497,-0.157182883491893,-0.157182883491893,-0.0910665494078046,-0.157182883491893,-0.157182883491893,-0.152976191689497,-0.157182883491893,-0.157182883491893,-0.152976191689497,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.092061213416723,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.110025210327949,-0.0100591333946453,-0.152976191689497,-0.152976191689497,0.38333835422898,0.382295676118504,0.330725331740249,0.816118098097172,0.802298064038822,0.619696157547374,0.0969507478826025,0.382719667657418,0.317795082733588,0.314603944915622,0.458049782332909,-0.0108415852633856,0.00643237207263603,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.152976191689497,-0.157182883491893,-0.157182883491893,-0.157182883491893,0.486674021027462,0.365835969634538,0.493261126183868,0.341713162136916,0.36398032420525,0.219052853502356,0.467595906179051,0.551354256769234,0.540708320549232,0.521916537341818,0.376043930370026,0.0926036152597708,0.34218709214861,0.352984411435503,0.273812290201207,0.287797381468702,0.199605324302126,0.0712120132155187,0.452020030721503,0.31961299489339,0.205417889795699,-0.157182883491893,-0.157182883491893,0.00420669180239561,0.689861580201528,0.560539843705898,0.607953464755372,0.901104903581057,0.62266027321913,0.53520070579899,0.358309136798032,0.620323846704693,0.774859266683421,0.399729015277243,0.345905626470084,0.695477555205773,0.496071854905798,0.396401098849004,0.663601714669327,0.494745219183518,0.717795903793663,0.579876181271923,0.820954507720293,0.870303224476318,0.746912229448066,0.472496928448662,0.640057978229384,0.436012652566743,0.500189696843551,0.919163915108231,0.67625970587436,0.429597216068373,0.512458172172044,0.864899026352228,0.774528625507258,0.84213868196091,0.577852479963355,0.230191212816385,1.00159484573228,0.618745006527538,0.783011879299229,1.11899021985787,0.80310081981328,0.671025383740321,0.773606709969024,0.912712136521352,0.601140885467375,0.828513890552135,0.685318253914439,0.439159358284077,1.14402902774883,0.794392021382946,0.619144253390553,-0.0152562105415386,0.0542470696649866,0.11242666559854,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.114347165658268,-0.152976191689497,-0.157182883491893,0.920238342724909,0.787485069503288,0.670342393516376,0.368402471623156,1.03139660871019,0.0110868451338771,-0.0853159994792002,-0.0592005502421416,-0.0330433588589207,-0.0673718913702264,-0.157182883491893,-0.0980448829181353,-0.0751646005170613,-0.157182883491893,0.38118849320391,0.496196419999148,0.580451949485566,0.566656709158826,0.0927002208104266,0.144308679796282,0.0486366351011384,-0.157182883491893,0.0551807895695968,0.28115033909972,-0.157182883491893,-0.157182883491893,-0.152976191689497,0.0389023869783238,0.209361724377179,0.48867625311419,0.230796296930419,0.129351438212734,0.466835974318881,0.0541653326343652,-0.157182883491893,0.0927872603233665,-0.157182883491893,-0.157182883491893,-0.0615892100769843,-0.065866222722357,-0.157182883491893,-0.157182883491893,-0.027181352903933,-0.0445633348397961,-0.157182883491893,-0.152976191689497,-0.152976191689497,-0.152976191689497,-0.157182883491893,-0.157182883491893,-0.0471861349774524,-0.101344305466825,-0.105260590336648,-0.0124717859430841,0.00869221718339142,0.192469035459975,0.154150630372676,-0.0389182482490011,-0.0154468535420649,0.878948180942566,0.767681332502045,0.67913174474005,0.295699837917968,0.5033567000601,0.565235906655027,0.584830771769667,0.690953565577541,0.728596128733476,0.755104187324183,0.800912241326251,0.363909107472448,0.376318750537301,0.265485843327279,0.464825332825769,0.306547990495761,0.303515133335521,0.412536731299259,0.159119308678623,0.227166620911275,-0.157182883491893,-0.157182883491893,-0.157182883491893,0.609889634081194,0.943453872171481,0.231980665997587,0.71451354027954,0.874674551355584,0.638908613995789,-0.152976191689497,-0.0086942519430212,-0.0681756487897354,-0.0579560815279641,0.0888929833554288,-0.157182883491893,-0.157182883491893,-0.0899199438077066,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,0.765491461532348,0.944070063639757,0.874852969864613,0.706709934837472,0.993936468943428,0.746784482360114,0.810806870168013,0.693294224177219,0.736147427190479,0.640714050528339,0.473087931253759,0.661778044946127,0.483690684539307,0.948261537225923,0.655081538862083,-0.157182883491893,-0.157182883491893,-0.152976191689497,-0.152976191689497,0.0253203430296134,0.0524394702744133,0.521114574917312,0.67167627187112,0.56385331382177,0.62498876583544,0.481846622754049,0.707355970033443,0.583622827340669,0.559981592554404,0.41091121740669,0.462008710143323,0.21783787572144,0.607794908103496,0.0481019550122898,-0.157182883491893,-0.157182883491893,0.200481843252176,0.213370075629106,0.206662941355854,-0.152976191689497,-0.157182883491893,0.094297105524915,-0.152976191689497,-0.157182883491893,0.437732489970716,0.326068095512504,0.160792660932726,0.252245912587519,0.41212832111372,0.0236040316453972,-0.0543752838666368,-0.131171531018988,0.00351054295714134,-0.157182883491893,-0.157182883491893,0.0268341030213465,0.315293871172526,-0.157182883491893,0.108126754279203,0.515668602225881,0.454131789460441,0.277832318361699,-0.0945395320852067,0.49728022579425,0.269187057220968,0.357788146105646,0.418358968680371,0.612266056411847,0.325831344823039,0.417463741098411,0.432639206123751,0.331001270121483,-0.157182883491893,-0.0766306924702333,0.0939348898381317,-0.157182883491893,0.128304910017003,0.878803092662728,0.226161476497105,0.453513022453524,0.378917232403569,0.284753128879982,0.268989589097626,0.449693839367726,0.635923904210153,0.95103398258288,0.725850792212255,0.700816106513431,0.786687890690424,0.360033887851751,0.070174918623723,0.346500494526029,0.335469212717148,0.468297209844372,0.522371975805908,0.60288581011026,0.29034178420492,0.477093735382394,0.346842851182271,0.340203338473384,0.513572837012455,0.263095661575495,0.356056341825261,0.203771229424543,0.409763338079872,0.607960903745536,0.641117068656726,0.64270629949279,0.373078519064598,0.253413661158886,0.38953146460897,0.425050810899825,0.352235282392971,0.370323446382856,0.161793084782293,0.893642512215005,0.780196272356757,0.643027068412813,0.426747715273225,-0.0470423992237311,0.0205768995600051,-0.157182883491893,0.155712369354355,-0.152976191689497,-0.152976191689497,-0.152976191689497,-0.152976191689497,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.0876037017844946,-0.152976191689497,-0.152976191689497,-0.119893448040235,-0.157182883491893,-0.157182883491893,0.0125734705803111,-0.00710920111507762,-0.157182883491893,-0.0737972441194589,-0.157182883491893,-0.157182883491893,-0.152976191689497,-0.152976191689497,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.152976191689497,-0.143856397598046,-0.0859614805945336,-0.10549214416936,-0.0463073323461763,0.104243850317358,-0.157182883491893,-0.157182883491893,-0.152976191689497,-0.157182883491893,0.149361640076649,-0.107437621089273,0.00291738783044332,0.0382385864297154,0.100642193441009,-0.0366818281094528,-0.0366472087419747,-0.157182883491893,-0.157182883491893,0.355711608693901,-0.157182883491893,-0.00420669180239561,0.288924108856708,-0.0154690447861405,-0.157182883491893,0.296263322933278,-0.106770331902578,0.898728263221982,-0.0493075493056553,-0.157182883491893,-0.157182883491893,0.0284226971614494,-0.157182883491893,0.84226221922941,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.152976191689497,0.0838128008291582,-0.0296309451244326,-0.152976191689497,0.0109536272227551,-0.152976191689497,-0.157182883491893,-0.152976191689497,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.139804279346511,-0.100497618080089,0.0306212874510807,0.271615667091041,0.0117120148118623,0.00802871502568495,0.205255945310268,0.311514392802618,0.56770788382767,0.568362641247563,-0.157182883491893,0.418832542864899,-0.0283339523291764,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.0889165211723894,-0.152976191689497,-0.157182883491893,-0.0448490171136515,-0.0721105280214111,0.214712898302593,-0.0119882054817142,-0.119541202126398,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.102262689172511,0.0950291290617138,-0.157182883491893,-0.0829064767520875,-0.152976191689497,-0.152976191689497,-0.157182883491893,0.376819643159028,-0.157182883491893,0.198055608399388,-0.152976191689497,-0.0965632261938456,0.0641410619779685,-0.0502130930572502,-0.0344029983905832,0.188403780043533,-0.157182883491893,0.245150973335178,-0.152976191689497,0.094197160192751,0.00396529279266916,0.0729866386801513,0.0701751841036843,-0.0465026225152415,-0.0979305749446914,-0.122909282900618,-0.0462677259799572,-0.152976191689497,-0.000951321423883211,0.242051333055446,0.250088910683083,-0.0816605980743211,-0.0754079456093911,0.0622039883296088,-0.073159925667535,0.046782036157741,-0.094515843701548,-0.157182883491893,-0.157182883491893,-0.157182883491893,0.146753380245918,-0.157182883491893,0.731213234388182,0.648752956812656,0.340018123570516,0.266588691280743,0.0470511648504422,-0.157182883491893,-0.152976191689497,0.494223194588916,-0.157182883491893,-0.050216458031015,0.0108768927838456,-0.0171017392705157,0.0130827218112484,-0.152976191689497,-0.0397313298363804,0.0379701679172286,0.847349280740159,-0.152976191689497,0.181621650202622,0.127277575277863,0.20087905856727,-0.112204801727999,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.152976191689497,-0.157182883491893,-0.152976191689497,-0.157182883491893,-0.157182883491893,-0.107383948936348,-0.157182883491893,-0.0650178729513549,0.0732783801774155,0.137148170977585,-0.157182883491893,0.172562111527519,0.0152970085890192,0,-0.0587923550225835,0.106250755245535,0.278731999059494,0.209948917234698,0.373606213551267,-0.0869541769127,0.604058001971994,0.325636073773376,0.0473842001296147,-0.0325067128509549,-0.152976191689497,-0.103247227596998,-0.147271191348866,-0.152976191689497,-0.0364897884574388,-0.0384524881548069,-0.036631082416323,0.0220035959273441,0.399564419773308,-0.103063621493748,-0.065017394853883,-0.157182883491893,-0.152976191689497,-0.157182883491893,-0.157182883491893,-0.0896225275054626,-0.157182883491893,-0.152976191689497,-0.157182883491893,-0.152976191689497,-0.157182883491893,-0.131018945498469,-0.0468882620143414,0.174346704295489,-0.0958627043417667,-0.157182883491893,0.184748377117723,-0.157182883491893,-0.157182883491893,0.321244300952245,0.236276063660794,0.479188165811721,0.605562920023982,0.460335046074876,0.842576181456915,0.39877692112067,0.713411513840103,0.291797072052009,0.308514709921833,0.326105548824222,0.00833283598912016,0.226089844098563,0.482271208764218,0.410317032057421,0.602571338346439,0.159159524449062,0.454097095606371,0.428062916615004,0.439153751263184,0.163854666190972,0.363977280567908,0.779691434349157,0.712074906894395,0.420726699584998,0.624661661792382,0.522748697581954,0.387388377237789,0.0627472108639772,0.279517430243329,0.072363535219219,0.336096248633192,0.442171623070831,0.199904860252761,0.192134629997632,0.161796684955879,0.387809621091376,0.0411283109491719,0.0250872945885779,-0.152976191689497,-0.121136365696845,0.453254602125843,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,0.210718389434091,0.144366590928227,0.198435797328404,-0.157182883491893,-0.108949527213004,-0.0839689247868204,0.728490666719124,0.44314734226249,-0.157182883491893,-0.112317461404249,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.157182883491893,0.930890061019777,-0.152976191689497,-0.157182883491893,0.463378248415404,0.613663801580505,-0.125941010654778,-0.152976191689497,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.1239346054191,-0.157182883491893,-0.157182883491893,0.112018162719218,-0.104546149463829,0.129678314816517,-0.157182883491893,0.646506541380934,0.0750029965092409,0.202689424779801,0.080197414010792,0.0525300173769373,-0.157182883491893,0.0257489016836322,0.290206362467141,-0.0972954421892664,-0.12879970939199,-0.157182883491893,-0.0755883227586662,-0.126273078847571,-0.157182883491893,0.0326603838396465,-0.0460332504903418,-0.157182883491893,0.148619621363931,-0.157182883491893,-0.157182883491893,-0.157182883491893,-0.0681040025293105,0.317059554042043,-0.0671125685114414,0.865384747298184,-0.128623938840002,-0.129518262016019,-0.152976191689497,-0.149765701692411,0.0372018371039595,-0.157182883491893,0.040299917445369,-0.152976191689497,0.342404672741625,-0.117421870181392,-0.0021934282613123,-0.152976191689497,-0.157182883491893,-0.0920703116903536,-0.0290922226973693,-0.152976191689497,-0.0887304107456224,-0.157182883491893,-0.157182883491893,0.29028366742264,0.290994374287949,0.109230891776362,-0.152976191689497,-0.0398431717328525,0.0430142281394916,-0.106927869600023,-0.112314433390639,-0.157182883491893,-0.157182883491893,-0.0718718060766326,0.181684454572899,0.20454019395726,0.0737303289773866,0.101282525390701,-0.108122337978876,-0.152976191689497,-0.157182883491893,-0.0961215799267667,0.0694706921543529,0.115641911499827,0.0102281826774754,0.0822279623103366,-0.157182883491893,-0.157182883491893,-0.0442273707497088,-0.00408306682306278,0.727915379821924,0.174956044813262,0.272738861910432,-0.0432985097829159,-0.081626728119149,-0.0611646824747607,-0.119455387582636,0.0809476574159552,-0.152976191689497,-0.152976191689497,-0.0893533137019796,-0.0765656053798313,-0.157182883491893,-0.091484340165316,0.661038077914672,0.608956417841105,0.71726405193558,0.0594330659193571,-0.157182883491893,0.0559342626536468,0.0501640970952823,-0.0501250623565816,0.104568522736145,-0.152976191689497,0.0528314293879014,0.0291880477777657,-0.152976191689497,-0.110230225203093,0.0575820285189217,0.18753180482007,-0.157182883491893,-0.152976191689497,0.799397841381798,-0.0544748432871708,-0.00974328243555972,-0.0674299125317357,-0.0191870838637349,0.0300039294854812,0.077643573905302,0.214499269901249,-0.0916754188115982,0.158215045376666,0.529582550916132,-0.157182883491893,0.204326881679282,0.0499685160906769,0.193511458691785,0.479183019252026,-0.0733341888710021,0.0621686411465088|full_id=C4613_pleomorphic_Fibroblast_mesodermal_Nucleus_Smooth_thyroid_hepatic|id=C4613|ontology_enrichment_celltype=CL:0000057!2.53e-29!76;CL:0000222!5.79e-21!121;CL:0000055!5.43e-17!106;CL:0000680!2.40e-15!58;CL:0000056!2.40e-15!58;CL:0000355!2.40e-15!58;CL:0000183!5.37e-15!59;CL:0002371!1.01e-14!588;CL:0000187!7.21e-14!55;CL:0002620!2.02e-13!23;CL:0002321!2.01e-12!250;CL:0000548!3.20e-12!679;CL:0000255!3.20e-12!679;CL:0000192!2.45e-11!43;CL:0000514!2.45e-11!43;CL:0000393!1.45e-10!61;CL:0000211!1.45e-10!61;CL:0000048!5.16e-09!427;CL:0000359!4.05e-08!32;CL:0000723!4.63e-08!433;CL:0000213!5.73e-07!58;CL:0000215!5.73e-07!58;CL:0000034!8.66e-07!441|ontology_enrichment_disease=|ontology_enrichment_uberon=UBERON:0007503!9.18e-19!78;UBERON:0002329!1.35e-18!71;UBERON:0003059!1.35e-18!71;UBERON:0007282!1.35e-18!71;UBERON:0004290!1.35e-18!71;UBERON:0009618!1.35e-18!71;UBERON:0000490!2.43e-18!148;UBERON:0007524!4.22e-18!73;UBERON:0003077!8.78e-18!72;UBERON:0007285!8.78e-18!72;UBERON:0005256!3.76e-17!122;UBERON:0000486!8.99e-17!83;UBERON:0003104!2.92e-16!160;UBERON:0009142!2.92e-16!160;UBERON:0002049!4.33e-16!78;UBERON:0007798!4.33e-16!78;UBERON:0004872!2.70e-14!83;UBERON:0001134!3.05e-14!62;UBERON:0002036!3.05e-14!62;UBERON:0003082!3.05e-14!62;UBERON:0002385!3.98e-14!64;UBERON:0001015!3.98e-14!64;UBERON:0000383!3.98e-14!64;UBERON:0000055!1.07e-12!68;UBERON:0003914!2.54e-12!117;UBERON:0000475!2.86e-12!264;UBERON:0002100!2.79e-11!199;UBERON:0007500!3.18e-11!59;UBERON:0001981!3.18e-11!59;UBERON:0004537!3.18e-11!59;UBERON:0006965!3.18e-11!59;UBERON:0004535!5.62e-11!109;UBERON:0001009!1.43e-10!112;UBERON:0002199!1.83e-10!46;UBERON:0002416!1.83e-10!46;UBERON:0001637!4.95e-10!42;UBERON:0003509!4.95e-10!42;UBERON:0004572!4.95e-10!42;UBERON:0002097!3.50e-09!41;UBERON:0004923!5.28e-09!66;UBERON:0003102!6.04e-09!99;UBERON:0004573!1.92e-08!33;UBERON:0004571!1.92e-08!33;UBERON:0000926!1.30e-07!315;UBERON:0004120!1.30e-07!315;UBERON:0006603!1.30e-07!315;UBERON:0000119!3.07e-07!309;UBERON:0000481!4.30e-07!342|tf_chipseq_enrich=CCNT2#905;3:6.33620157696263:0.00393075003576489:0.0191047842044513!E2F1#1869;3:4.90738921487932:0.00846098534723939:0.032747437321388!E2F6#1876;3:5.01715573169739:0.0079176980688633:0.0324128437054725!EGR1#1958;3:4.98817909481014:0.00805648813738344:0.0322318163026313!ELF1#1997;3:4.25809795880754:0.0129517987505461:0.0464724262104746!ELK4#2005;2:10.823787772312:0.0109128471951648:0.0402119341006885!GABPB1#2553;3:7.06768383618217:0.00283221282541742:0.0154768457133618!IRF1#3659;3:7.6371637535639:0.00224469274729724:0.0128682328375769!NFKB1#4790;3:5.48806342419384:0.00604938181565543:0.0270771605642325!REST#5978;3:9.65002871612802:0.00111263624711459:0.00770983393128985!SIN3A#25942;3:5.40888472681514:0.00631896197799152:0.0278141387457098!TAF7#6879;3:11.4330694049239:0.000669018198194583:0.0054544567994726!TFAP2A#7020;2:11.0124229153633:0.0105499065521556:0.0390343178658938!TFAP2C#7022;3:10.8092286098602:0.000791674657575313:0.00618597258435644!USF2#7392;3:12.9921973850696:0.000455897939342781:0.00422930581693203!ZBTB7A#51341;3:7.3519093078759:0.00251625586028227:0.0140856110731639!ZNF263#10127;3:8.22184163701068:0.00179904392556587:0.01100576080964|tfbs_overrepresentation=0.147255,0.0586687,0.00192761,0.0477154,0.199763,0.287811,0.0430074,0.0022397,0.03272,0.0257057,0.139423,0.225367,0.188771,0.125978,0.148679,0.0619003,0.140982,0.0982016,0.0528514,0.108057,0.188635,0.132577,0.081977,0.0948982,0.0415721,0.215492,0.209392,0.0907212,0.143747,0.0933697,0.204953,0.114046,0.0180314,0.208242,0.0665252,0.0844722,0.00687964,0.0429682,0.120351,0.0667043,0.0964797,0.0246116,0.140039,0.184019,0.120917,0.0362416,0.0380166,0.18151,0.111283,0.121201,0.154071,0.0541794,0.00252127,0.0929951,0.198787,0.0384161,0.107455,0.212709,0.0783235,0.105572,0.0294301,0.149417,0.108602,0.0759481,0.054569,0.0504887,0.0709764,0.0600088,0.0860723,0.167053,0.0126543,0.067678,0.089036,0.119383,0.00747605,0.0171177,0.0964936,0.0436945,0.0372495,0.00725252,0.0956287,0.226912,0.0425,0.114846,0.0472875,0.00327964,0.064341,0.209032,0.0154619,0.062747,0.0857568,0.0495878,0.0953825,0.0473737,0.0853887,0.115028,0.0594776,0.153631,0.0927458,0.27413,0.0574857,0.276221,0.141874,0.0370665,0.219088,0.0409286,0.0669887,0.338096,0.144217,0.0400492,0.182599,0.0339971,0.149552,0.0176855,0.101221,0.0337525,0.0203386,0.0566549,0.139021,0.0838393,0.16671,0.214708,0.140123,0.0857827,0.102368,0.176912,0.0906875,0.0147934,0.0843604,0.134932,0.0595773,0.0748346,0.0572164,0.0227861,0.125792,0.108101,0.0648644,0.0553359,0.0330399,0.00395526,0.022776,0.127606,0.203923,0.155998,5.12341e-06,0.0693171,0.0988228,0.0842275,0.0389418,0.120833,0.200647,0.143677,0.180712,0.0265818,0.0427088,0.117549,0.0747594,0.228385,0.0516985,0.0337251,0.227719,0.0952829,0.116642,0.147788,0.273479,0.114283,0.0400322,0.127369,0.0403542,0.312091,0.179689,0.137725,0.46397,0.0541353,0.0799324,0.090079,0.140334,0.181817,0.178449,0.000642566,0.158844,0.122474,0.0274061,0.115574,0.0737247,0.118847,0.183031,0.0401756,0.0828697,0.173562,0.107145,0.187297,0.122935,0.228812,0.112671,0.0470731,0.0782523,0.0602859,0.0676496,0.109673,0.0893019,0.060398,0.0308319,0.0606036,0.136451,0.259411,0.27358,0.15185,0.206299,0.178359,0.0458667,0.104357,0.121154,0.1129,0.312578,0.0151713,0.164202,0.100942,0.062995,0.10299,0.14193,0.0800546,0.15606,0.161026,0.0738599,0.126611,0.138852,0.085973,0.060453,0.059896,0.206862,0.0859236,0.0418404,0.0765029,0.0959204,0.0931946,0.0472272,0.263087,0.163502,0.0249262,0.182472,0.348993,0.0983991,0.0830921,0.116283,0.136838,0.0815104,0.111647,0.0802194,0.117027,0.159052,0.185164,0.185743,0.0980288,0.0980899,0.159674,0.107242,0.201859,0.0695832,0.0585224,0.0619218,0.00102968,0.163376,0.128096,0.0345133,0.0810678,0.0811639,0.0920653,0.118078,0.0755168,0.278352,0.063292,0.254773,0.446759,0.0865903,0.0380459,0.130174,0.219944,0.131316,0.0691572,0.0821962,0.20128,0.0986134,2.6703e-09,0.335423,0.629514,0.261553,0.446302,0.373681,0.309233,0.49143,0.330703,0.395854,0.329568,0.53472,0.0164332,0.271958,0.292154,0.405773,0.0921263,0.581713,0.597171,0.187251,0.362792,0.181715,0.423979,0.109988,0.330894,0.218329,0.427027,0.376924,0.463191,0.647576,0.528324,0.520763,0.370782,0.101703,0.484505,0.253571,0.276829,0.301787,0.481778,0.316882,0.223503,0.503224,0.603208,0.283727,0.314747,0.0567394,0.291709,0.448095,0.576651,0.416816,0.0478086,0.476744,0.439556,0.373868,0.57762,0.241757,0.18237,0.126021,0.00847576,1.43819e-05,0.275351,0.236471,0.185661,0.346319,0.535598,0.270984,0.258117,0.503058,0.513852,0.522083,0.248634,0.281576,0.135034,0.163244,0.0670502,0.0730934,0.184794,0.596648,0.176034,0.581837,0.412837,0.671377,0.546839,0.551561,0.120021,0.218623,0.312808,0.117923,0.0451077,0.0747529,0.229003,0.650179,0.223844,0.50215,0.294698,0.34331,0.138202,0.289204,0.327108,0.00650617,0.278044,0.0015747,0.428671,0.228096,0.336314,0.19763,0.15631,0.20495,0.421464,0.48267,0.420626,0.516462,2.91338e-09,0.335105,0.144809,0.145539,0.385517,0.376191,0.119597,0.459928,0.252232,0.152681,0.0465712,0.137098,0.259235,0.134788,0.0985856,0.546222,0.293698,0.284593,0.343734,0.306556,0.305777,0.2348,0.503082,0.522888,0.0450125,0.262537,0.359455,0.226257,0.405955,0.41707,0.363685,0.464871,0.753577,0.206222,0.03988,0.0905337,0.020698,0.269226,0.339277,0.552319,0.281425,0.141758,0.124432,0.168058,0.159617,0.238587,0.372281,0.232251,0.189515,0.0891382,0.0595618,0.0397695,0.0769581,0.347298,0.539392,0.34988,0.475069,0.404569,0.6408,0.000578907,0.316179,0.0697683,0.0556835,0.192544,0.0779981,0.0575676,0.144322,0.223391,0.203656,0.442884,0.0214618,0.191777,0.111931,0.28934,0.0435386,0.303336,0.126478,0.134852,0.10689,0.0413156,0.0627924,0.00151445,0.0179103,0.303939,0.279795,0.390395,0.0464827,0.169603,0.114583,0.104559,0.0899537,0.0866966,0.15983,0.107111,0.0438639,0.00389058,0.123593,0.129156,0.210369,0.193675,0.346372,0.0499762,0.0828956,0.0666953,0.182185,0.111277,0.219383,0.332809,0.19559,0.132201,0.188694,0.0481795,0.199971,0.406014,0.127758,0.175785,0.184486,0.169234,0.0876426,0.0952322,0.0112557,0.0268081,0.107043,0.275244,0.00481323,0.173708,0.141119,0.211595,0.0300692,0.131551,0.0445237,0.052362,0.208866,0.153187,0.0797897,0.0974211,0.160149,0.123526,0.0906475,0.0558058,0.28262,0.517717,0.137332,0.0145999,0.0656973,0.211746,0.220538,0.0801488,0.0757897,0.161801,0.193215,0.0549034,0.0779715,0.0561838,0.0417636,0.0345419,0.0388736,1.43241e-05,0.170307,0.201033,0.0488949,0.174921,0.370421,0.0330727,0.00956472,0.02609,0.0394698,0.0596469,0.103658,0.122476,0.108872,0.11002,0.26144,0.0286025,0.0470027,0.144567,0.038848,0.0874516,0.0550279,0.144067,0.253693,0.217069,0.190048,0.131088,0.394069,0.237101,0.286988,0.0761239,0.172491,0.0818785,0.182701,0.00836526,0.147698,0.141463,0.167267,0.140622,0.0889592,0.00643528,0.28711,0.0473033,0.094881,0.118532,0.132886,0.0774373,0.109194,0.128564,0.131452,0.00128046,0.0226843,0.051838,0.0993999,0.0500365,0.061829,0.0755121,0.0936516,0.144075,0.0340203,0.0741807,0.277091,1.59254e-06,0.0926491,0.21727,0.289306,0.119215,0.192475,0.177967,0.188967,0.057571,0.047591,0.00174134,0.0608699,0.175319,0.300597,0.0713214,0.223874,0.291114,0.0355833,0.125606,0.175094,9.8105e-10,2.45674e-12,0.206454,0.218192,0.108277,0.0673484,0.108748,0.0494066,0.0958493,0.205732,0.0755808,0.045654,0.110216,0.070276,0.00232088,0.153469,0.0376916,0.13262,0.0450031,0.0539144,0.114242,0.0929549,0.172425,0.104948,0.221645,0.057168,0.234298,0.0759837,0.286863,0.0122477,0.194941,0.218271,0.101607,0.327067,0.172982,0.340936,0.151597,0.0626744,0.191335,0.148574,0.034431,0.155821,0.0718905,0.0919008,0.0602373,0.144304,0.15063,0.0973823,0.15503,0.170295,0.193653,0.137219,0.228144,0.251466,0.288096,0.11903,0.0838874,0.331451,0.113145,0.112651,0.186638,0.01625,0.0948451,0.264079,0.249049,0.140533,0.0997756,0.257598,0.103667,0.113069,0.025556,0.16791,0.09066,0.585505,0.166967,0.188651,0.0813902,0.184948,0.156261,0.0546539,0.0062542,0.0590944,0.247324,0.178389,0.218229,0.231073,0.000211542,6.78596e-05,0.0360851,0.000227331,0.131093,0.0434602,0.133616,0.418146,0.0785808,0.449036,0.407369,0.231447,0.544776,0.43956,0.37006,0.0189483,0.448797,0.197484,0.396996,0.36145,0.406019,0.381071,0.580441,0.276075,0.432035,0.366326,0.390366,0.48809,0.50058,0.443185,0.522904,6.58045e-05,9.77634e-15,0.227104,0.166658,0.617852,0.38649,0.284625,0.00583062,0.04783,0.144318,0.28907,0.164197,0.462688,0.00506733,0.21103,0.478174,0.336276,0.468444,0.258219,0.0222932,0.243383,0.0186777,0.390974,0.382874,0.00650842,0.161598,0.0527155,0.644754,0.496032,0.0239796,0.0120582,0.0203982,0.477353,0.000195013,0.00292516,2.48085e-05,0.20342,0.200493,0.20558,0.300504,0.25656,0.0189087,0.349197,0.383291,0.156104,0.141318,0.411941,0.0961477,0.314438,0.354789,0.163828,0.230581,0.120226,0.28424,2.5986e-06,0.314429,0.181415,0.282286,0.446891,0.616388,0.408413,0.516511,0.0586066,0.0931134,0.33942,0.61031,0.387276,0.0391112,0.0248202,0.537348,0.222037,0.416621,0.416292,0.462712,0.148994,0.000280804,0.204817,0.452428,0.138871,0.00583733,0.166905,0.19783,0.0833851,0.316453,0.48065,0.175199,0.332919,0.373557,0.523625,0.408861,0.365487,0.534741,0.39088,0.363192,0.236011,0.203486,0.273398,0.375787,0.4466,0.351067,0.275347,0.637444,0.305885,0.241132,0.371414,0.30666,0.303709,0.15059,0.0867777,0.508064,0.250964,0.383276,0.457886,0.504711,0.220231,0.509064,0.196976,0.191517,0.463751,0.601877,0.307334,0.459728,0.283463,0.563586,0.135386,0.0932845,0.273281,0.368095,0.275089,0.384593,0.47795,0.359231,0.339729,0.197805,0.608187,0.387069,0.332774,0.52832,0.299887,0.0814305,0.205413,0.17639,0.0779009,0.276869,0.205298,0.0337138,0.18966,0.258854,0.188263,0.0719199,0.264884,0.162568,0.19104,0.163057,0.219428,0.0233135,0.00418416,0.0953646,0.166124,0.252184,0.378361,0.255516,0.20753,0.447185,0.179412,0.193601,0.220904,0.222977,0.341681,0.310674,0.21801,0.198614,0.186804,0.123324,0.199468,0.0325925,0.0933115,0.12405,0.179889,0.226869,0.27872,0.0855609,0.131118,0.20837,0.247588,0.222339,0.0673329,0.20847,0.266544,0.113092,0.145701,0.229428,0.0139199,0.228955,0.168748,0.0384949,0.0660995,0.0521984,0.0455518,0.268741,0.201602,0.350452,0.154941,0.120196,0.0986735,0.108462,0.0595618,0.21593,0.158479,0.220319,0.195218,0.124213,0.259632,0.30793,0.180606,0.159884,0.257294,0.150733,0.217112,0.123917,0.184317,0.185335,0.0723291,0.258496,0.261744,0.203781,0.21382,0.207559,0.141867,0.193031,0.249101,0.115972,0.224568,0.246105,0.173026,0.200432,0.139785,0.197112,0.240478,0.156465,0.13108,0.256963,0.222798,0.172134,0.176789,0.0969345,0.202137,0.310405,0.0437875,0.218161,0.0822373,0.202065,0.106739,0.0536053,0.0537737,0.15113,0.078016,0.0407233,0.0537355,0.319922,0.261724,0.211332,0.187731,0.233626,0.189559,0.0812887,0.0981146,0.064145,0.121913,0.0638699,0.104603,0.0663259,0.0762523,0.128736,0.109171,0.04411,0.066952,0.089609,0.0367455,0.13497,0.204393,0.295769,0.286691,0.347036,0.141729,0.263159,0.255956,0.200105,0.227491,0.29837,0.253509,0.177664,0.28365,0.264413,0.131761,0.160658,0.206239,0.19924,0.28689,0.0304659,0.325148,0.115817,0.218052,0.223831,0.11528,0.194982,0.190993,0.281727,0.283218,0.249955,0.164638,0.224257,0.0935776,0.327622,0.225752,0.207791,0.0958756,0.0859274,0.316866,0.171683,0.158847,0.271275,0.071111,0.270604,0.101021,0.222548,0.175934,0.157274,0.215705,0.252796,0.205954,0.361435|tfbs_overrepresentation_for_novel_motifs=0.699513,0.869629,0.690871,0.855819,0.641468,0.853988,0.937929,1.23863,0.491742,0.221898,0.820209,0.985163,1.11328,0.925331,0.639839,0.667627,1.17594,0.575162,0.452865,0.305559,0.69094,0.242883,0.845342,0.635379,0.743951,1.00973,0.409304,0.842925,2.63304,0.388328,0.795576,1.21459,1.3235,0.439574,6.19641,1.36391,1.45286,0.855276,0.567465,2.05816,0.598234,0.777097,0.259059,0.63803,0.151453,0.726632,0.939121,0.808003,0.247669,0.645308,2.33699,0.951993,0.336258,1.29475,1.45259,0.928548,0.650353,0.892517,0.388177,0.891404,1.25741,0.941709,0.492369,1.14672,0.961293,1.11026,1.54311,1.91674,1.2037,1.75271,0.762094,0.502203,0.333216,1.45054,2.87582,1.06461,0.396746,1.12884,1.20029,0.73687,0.459024,1.14559,0.960908,0.498519,1.39759,10.6662,0.303648,0.381882,1.053,2.0169,1.63834,3.03421,1.23218,0.543775,1.54991,0.560075,0.450952,1.27663,1.05794,0.946807,0.569121,1.22626,1.27082,1.1798,1.09802,0.815119,1.16312,0.921547,0.743661,0.622396,0.703975,1.26794,0.684398,1.94007,1.58942,0.594137,1.66424,0.794219,1.10778,0.547323,1.44203,1.0504,0.850918,0.973172,1.70203,1.12965,0.930979,1.2374,1.48578,0.561252,1.37044,0.798812,1.50051,0.969553,1.65144,0.372828,0.788803,0.843556,1.60823,2.47382,2.06967,1.57016,0.932872,1.27296,1.09989,0.883164,1.08214,2.31409,0.773313,0.539692,0.318511,4.59952,1.37083,2.09999,0.941179,1.78371,1.03563,0.624795,0.744018,0.710709,1.56892,1.35169,1.19946,0.714443,1.11698,0.960047,0.524529,0.936473,5.4618|tfbs_overrepresentation_jaspar=MA0003.1;11.2405,MA0004.1;0.826076,MA0006.1;0.639288,MA0007.1;0.804807,MA0009.1;1.3275,MA0014.1;3.14798,MA0017.1;0.686276,MA0019.1;0.990656,MA0024.1;1.21731,MA0025.1;1.46617,MA0027.1;2.95767,MA0028.1;0.658629,MA0029.1;1.23771,MA0030.1;1.22561,MA0031.1;1.15713,MA0038.1;0.94098,MA0040.1;1.24388,MA0041.1;0.847069,MA0042.1;0.810843,MA0043.1;1.32783,MA0046.1;1.31611,MA0048.1;0.341392,MA0050.1;0.81185,MA0051.1;0.936307,MA0052.1;1.24796,MA0055.1;0.190716,MA0056.1;0,MA0057.1;0.333427,MA0058.1;0.716037,MA0059.1;0.714521,MA0060.1;0.492218,MA0061.1;0.456531,MA0063.1;0,MA0066.1;0.941452,MA0067.1;1.65513,MA0068.1;1.04561,MA0069.1;1.31207,MA0070.1;1.30033,MA0071.1;0.897953,MA0072.1;1.29561,MA0073.1;4.54482,MA0074.1;0.935474,MA0076.1;0.734647,MA0077.1;1.28751,MA0078.1;1.04495,MA0081.1;0.714712,MA0083.1;1.33535,MA0084.1;1.84562,MA0087.1;1.29304,MA0088.1;0.257905,MA0089.1;0,MA0090.1;0.751469,MA0091.1;0.829044,MA0092.1;0.785956,MA0093.1;0.642957,MA0095.1;0,MA0098.1;0,MA0100.1;0.956299,MA0101.1;0.646932,MA0103.1;0.628063,MA0105.1;0.31555,MA0106.1;0.986396,MA0107.1;0.556367,MA0108.2;1.15387,MA0109.1;0,MA0111.1;0.767139,MA0113.1;1.00436,MA0114.1;0.549955,MA0115.1;1.57693,MA0116.1;0.560723,MA0117.1;1.36676,MA0119.1;0.695578,MA0122.1;1.39371,MA0124.1;1.53432,MA0125.1;1.44766,MA0130.1;0,MA0131.1;1.06461,MA0132.1;0,MA0133.1;0,MA0135.1;1.35921,MA0136.1;0.948776,MA0139.1;1.96087,MA0140.1;0.894983,MA0141.1;0.712476,MA0142.1;1.12317,MA0143.1;1.00455,MA0144.1;0.531867,MA0145.1;0.752137,MA0146.1;1.16674,MA0147.1;0.565108,MA0148.1;0.854239,MA0149.1;0.884158,MA0062.2;0.449458,MA0035.2;0.894194,MA0039.2;5.50873,MA0138.2;1.04628,MA0002.2;0.476938,MA0137.2;0.666381,MA0104.2;0.491226,MA0047.2;0.973066,MA0112.2;0.264678,MA0065.2;0.277623,MA0150.1;0.744617,MA0151.1;0,MA0152.1;0.902317,MA0153.1;1.43021,MA0154.1;0.312019,MA0155.1;2.02721,MA0156.1;0.669101,MA0157.1;1.09377,MA0158.1;0,MA0159.1;0.565904,MA0160.1;0.871361,MA0161.1;0,MA0162.1;6.1256,MA0163.1;2.48891,MA0164.1;1.01792,MA0080.2;0.643061,MA0018.2;0.987913,MA0099.2;0.902716,MA0079.2;10.8725,MA0102.2;1.88331,MA0258.1;0.519674,MA0259.1;1.40979,MA0442.1;0}} | ||
| | |||
}} |
Latest revision as of 14:16, 17 September 2013
Full id: C4613_pleomorphic_Fibroblast_mesodermal_Nucleus_Smooth_thyroid_hepatic
Phase1 CAGE Peaks
Hg19::chr6:52441770..52441784,- | p2@TRAM2 |
Hg19::chr6:52441791..52441804,- | p3@TRAM2 |
Hg19::chr6:52441810..52441865,- | p1@TRAM2 |
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
No results for this coexpression
Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data
No GOStat results
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.53e-29 | 76 |
mesodermal cell | 5.79e-21 | 121 |
non-terminally differentiated cell | 5.43e-17 | 106 |
muscle precursor cell | 2.40e-15 | 58 |
myoblast | 2.40e-15 | 58 |
multi-potent skeletal muscle stem cell | 2.40e-15 | 58 |
contractile cell | 5.37e-15 | 59 |
somatic cell | 1.01e-14 | 588 |
muscle cell | 7.21e-14 | 55 |
skin fibroblast | 2.02e-13 | 23 |
embryonic cell | 2.01e-12 | 250 |
animal cell | 3.20e-12 | 679 |
eukaryotic cell | 3.20e-12 | 679 |
smooth muscle cell | 2.45e-11 | 43 |
smooth muscle myoblast | 2.45e-11 | 43 |
electrically responsive cell | 1.45e-10 | 61 |
electrically active cell | 1.45e-10 | 61 |
multi fate stem cell | 5.16e-09 | 427 |
vascular associated smooth muscle cell | 4.05e-08 | 32 |
somatic stem cell | 4.63e-08 | 433 |
lining cell | 5.73e-07 | 58 |
barrier cell | 5.73e-07 | 58 |
stem cell | 8.66e-07 | 441 |
Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
Motifs | -log10(p-value) |
---|---|
MA0003.1 | 11.2405 |
MA0004.1 | 0.826076 |
MA0006.1 | 0.639288 |
MA0007.1 | 0.804807 |
MA0009.1 | 1.3275 |
MA0014.1 | 3.14798 |
MA0017.1 | 0.686276 |
MA0019.1 | 0.990656 |
MA0024.1 | 1.21731 |
MA0025.1 | 1.46617 |
MA0027.1 | 2.95767 |
MA0028.1 | 0.658629 |
MA0029.1 | 1.23771 |
MA0030.1 | 1.22561 |
MA0031.1 | 1.15713 |
MA0038.1 | 0.94098 |
MA0040.1 | 1.24388 |
MA0041.1 | 0.847069 |
MA0042.1 | 0.810843 |
MA0043.1 | 1.32783 |
MA0046.1 | 1.31611 |
MA0048.1 | 0.341392 |
MA0050.1 | 0.81185 |
MA0051.1 | 0.936307 |
MA0052.1 | 1.24796 |
MA0055.1 | 0.190716 |
MA0056.1 | 0 |
MA0057.1 | 0.333427 |
MA0058.1 | 0.716037 |
MA0059.1 | 0.714521 |
MA0060.1 | 0.492218 |
MA0061.1 | 0.456531 |
MA0063.1 | 0 |
MA0066.1 | 0.941452 |
MA0067.1 | 1.65513 |
MA0068.1 | 1.04561 |
MA0069.1 | 1.31207 |
MA0070.1 | 1.30033 |
MA0071.1 | 0.897953 |
MA0072.1 | 1.29561 |
MA0073.1 | 4.54482 |
MA0074.1 | 0.935474 |
MA0076.1 | 0.734647 |
MA0077.1 | 1.28751 |
MA0078.1 | 1.04495 |
MA0081.1 | 0.714712 |
MA0083.1 | 1.33535 |
MA0084.1 | 1.84562 |
MA0087.1 | 1.29304 |
MA0088.1 | 0.257905 |
MA0089.1 | 0 |
MA0090.1 | 0.751469 |
MA0091.1 | 0.829044 |
MA0092.1 | 0.785956 |
MA0093.1 | 0.642957 |
MA0095.1 | 0 |
MA0098.1 | 0 |
MA0100.1 | 0.956299 |
MA0101.1 | 0.646932 |
MA0103.1 | 0.628063 |
MA0105.1 | 0.31555 |
MA0106.1 | 0.986396 |
MA0107.1 | 0.556367 |
MA0108.2 | 1.15387 |
MA0109.1 | 0 |
MA0111.1 | 0.767139 |
MA0113.1 | 1.00436 |
MA0114.1 | 0.549955 |
MA0115.1 | 1.57693 |
MA0116.1 | 0.560723 |
MA0117.1 | 1.36676 |
MA0119.1 | 0.695578 |
MA0122.1 | 1.39371 |
MA0124.1 | 1.53432 |
MA0125.1 | 1.44766 |
MA0130.1 | 0 |
MA0131.1 | 1.06461 |
MA0132.1 | 0 |
MA0133.1 | 0 |
MA0135.1 | 1.35921 |
MA0136.1 | 0.948776 |
MA0139.1 | 1.96087 |
MA0140.1 | 0.894983 |
MA0141.1 | 0.712476 |
MA0142.1 | 1.12317 |
MA0143.1 | 1.00455 |
MA0144.1 | 0.531867 |
MA0145.1 | 0.752137 |
MA0146.1 | 1.16674 |
MA0147.1 | 0.565108 |
MA0148.1 | 0.854239 |
MA0149.1 | 0.884158 |
MA0062.2 | 0.449458 |
MA0035.2 | 0.894194 |
MA0039.2 | 5.50873 |
MA0138.2 | 1.04628 |
MA0002.2 | 0.476938 |
MA0137.2 | 0.666381 |
MA0104.2 | 0.491226 |
MA0047.2 | 0.973066 |
MA0112.2 | 0.264678 |
MA0065.2 | 0.277623 |
MA0150.1 | 0.744617 |
MA0151.1 | 0 |
MA0152.1 | 0.902317 |
MA0153.1 | 1.43021 |
MA0154.1 | 0.312019 |
MA0155.1 | 2.02721 |
MA0156.1 | 0.669101 |
MA0157.1 | 1.09377 |
MA0158.1 | 0 |
MA0159.1 | 0.565904 |
MA0160.1 | 0.871361 |
MA0161.1 | 0 |
MA0162.1 | 6.1256 |
MA0163.1 | 2.48891 |
MA0164.1 | 1.01792 |
MA0080.2 | 0.643061 |
MA0018.2 | 0.987913 |
MA0099.2 | 0.902716 |
MA0079.2 | 10.8725 |
MA0102.2 | 1.88331 |
MA0258.1 | 0.519674 |
MA0259.1 | 1.40979 |
MA0442.1 | 0 |
ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data
(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)
TF | #promoters | Enrichment | p-value | q-value |
---|---|---|---|---|
CCNT2#905 | 3 | 6.33620157696263 | 0.00393075003576489 | 0.0191047842044513 |
E2F1#1869 | 3 | 4.90738921487932 | 0.00846098534723939 | 0.032747437321388 |
E2F6#1876 | 3 | 5.01715573169739 | 0.0079176980688633 | 0.0324128437054725 |
EGR1#1958 | 3 | 4.98817909481014 | 0.00805648813738344 | 0.0322318163026313 |
ELF1#1997 | 3 | 4.25809795880754 | 0.0129517987505461 | 0.0464724262104746 |
ELK4#2005 | 2 | 10.823787772312 | 0.0109128471951648 | 0.0402119341006885 |
GABPB1#2553 | 3 | 7.06768383618217 | 0.00283221282541742 | 0.0154768457133618 |
IRF1#3659 | 3 | 7.6371637535639 | 0.00224469274729724 | 0.0128682328375769 |
NFKB1#4790 | 3 | 5.48806342419384 | 0.00604938181565543 | 0.0270771605642325 |
REST#5978 | 3 | 9.65002871612802 | 0.00111263624711459 | 0.00770983393128985 |
SIN3A#25942 | 3 | 5.40888472681514 | 0.00631896197799152 | 0.0278141387457098 |
TAF7#6879 | 3 | 11.4330694049239 | 0.000669018198194583 | 0.0054544567994726 |
TFAP2A#7020 | 2 | 11.0124229153633 | 0.0105499065521556 | 0.0390343178658938 |
TFAP2C#7022 | 3 | 10.8092286098602 | 0.000791674657575313 | 0.00618597258435644 |
USF2#7392 | 3 | 12.9921973850696 | 0.000455897939342781 | 0.00422930581693203 |
ZBTB7A#51341 | 3 | 7.3519093078759 | 0.00251625586028227 | 0.0140856110731639 |
ZNF263#10127 | 3 | 8.22184163701068 | 0.00179904392556587 | 0.01100576080964 |
Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data
This analysis result is provided for C0 - C305 clusters.