FFCP PHASE1:Hg19::chr17:73737085..73737088,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:73737085..73737088,+
|short_description=p@chr17:73737085..73737088,+
|description=CAGE_peak_at_chr17:73737085..73737088,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:73737085..73737088,+ | |||
|description=CAGE_peak_at_chr17:73737085..73737088,+ | |||
|id=chr17:73737085..73737088,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.04e-25!254;CL:0002159!2.21e-17!13;CL:0002076!2.55e-15!43;CL:0000223!6.29e-11!59;CL:0002368!8.35e-11!13;CL:0000076!4.10e-10!62;CL:0002251!1.57e-09!21;CL:0002202!1.92e-09!9;CL:0002632!1.92e-09!9;CL:0002077!2.85e-09!33;CL:0002328!2.24e-08!3;CL:0000349!3.54e-08!3;CL:0002577!3.54e-08!3;CL:0002166!6.11e-08!3;CL:0002621!7.20e-08!3;CL:0000362!1.39e-07!8;CL:0002605!1.41e-07!3;CL:0002150!7.29e-07!3;CL:0000861!7.29e-07!3;CL:0000240!8.24e-07!6;CL:0000311!8.24e-07!6;CL:0000079!8.24e-07!6;CL:0000237!8.24e-07!6;CL:0000036!8.24e-07!6;CL:0000357!8.24e-07!6;CL:0000114!8.24e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:1001319;3.67e-23;1!CL:1000600;3.67e-23;1!CL:0002252;3.67e-23;1!CL:0000575;1.56e-12;2!CL:1000415;2.74e-12;2!CL:0000307;9.66e-09;3!CL:0002577;1.26e-08;3!CL:0002159;2.36e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002252,3.28e-23,1;CL:1001319,4.10e-23,1;CL:1000600,4.10e-23,1;CL:0000575,1.65e-12,2;CL:1000415,2.07e-12,2;CL:0000068,9.66e-09,3;CL:0000069,9.66e-09,3;CL:0000307,9.66e-09,3;CL:0000377,9.66e-09,3;CL:0002577,1.40e-08,3;CL:0002159,2.36e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.67e-23;1!CL:0000377;9.66e-09;3 | |||
|ontology_enrichment_disease=DOID:1749!3.97e-12!14;DOID:305!1.93e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001987!1.53e-10!4;UBERON:0004340!1.53e-10!4;UBERON:0004119!1.80e-10!169;UBERON:0000925!1.80e-10!169;UBERON:0006595!1.80e-10!169;UBERON:0004815!2.24e-08!3;UBERON:0002031!2.24e-08!3;UBERON:0003729!5.47e-08!5;UBERON:0001949!7.20e-08!3;UBERON:0007196!1.77e-07!14;UBERON:0001558!1.77e-07!14;UBERON:0000064!1.95e-07!219;UBERON:0005910!7.64e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;3.67e-23;1!UBERON:0001256;3.67e-23;1!UBERON:0001259;3.67e-23;1!UBERON:0001987;8.02e-23;4!UBERON:0001255;2.74e-12;2!UBERON:0001556;2.74e-12;2!UBERON:0001043;1.26e-08;3!UBERON:0002110;1.26e-08;3!UBERON:0000077;5.84e-08;27!UBERON:0000964;6.68e-07;4!UBERON:0010409;6.68e-07;4!UBERON:0003343;8.85e-07;4!UBERON:0004785;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,4.10e-23,1;UBERON:0001256,4.10e-23,1;UBERON:0001259,4.10e-23,1;UBERON:0001987,1.25e-22,4;UBERON:0004340,1.25e-22,4;UBERON:0003124,2.17e-13,7;UBERON:0001255,2.90e-12,2;UBERON:0001556,2.90e-12,2;UBERON:0002110,1.04e-08,3;UBERON:0006242,1.04e-08,3;UBERON:0001043,1.21e-08,3;UBERON:0009143,1.21e-08,3;UBERON:0000077,2.08e-07,29;UBERON:0005631,3.66e-07,14;UBERON:0000158,3.66e-07,14;UBERON:0000964,6.87e-07,4;UBERON:0010409,6.87e-07,4;UBERON:0004348,6.87e-07,4;UBERON:0005427,6.87e-07,4;UBERON:0003343,8.14e-07,4;UBERON:0004785,8.14e-07,4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0.85870796139317,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,4.00724817121796,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.860413786167011,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.329250856225877,4.49607013030478,0.301586917234893,0.648119116109707,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0.93733833986777,0.335964256397719,0.283550194484773,0.268675568108545,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.638063562472921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,2.01090682660736,0,0.564862804660675,0.86101074534246,0,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718946809178615,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.0769502585037971,0,0,0.359030577639089,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.627865836814451,0,0,0,0,0.195984794828755,0.870592065804026,0,0,0.19351266257817,0.0730893170861856,0.164230914106418,0,0,0,0,0,0.0633107959558787,1.95551382734803,0.0801588202515337,0,0,0.288180834308212,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,1.86480665151949,0.11796972334774,0,0.346576998451015,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5966426629275,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392600934460972,0.365753774946808,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,1.70946864083046,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr17:73737085..73737088,+ | |||
}} | }} |
Latest revision as of 21:12, 25 July 2015
Short description: | p@chr17:73737085..73737088, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:73737085..73737088, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of esophagus | 3.28e-23 | 1 |
bladder cell | 4.10e-23 | 1 |
lower urinary tract cell | 4.10e-23 | 1 |
corneal epithelial cell | 1.65e-12 | 2 |
epithelial cell of gall bladder | 2.07e-12 | 2 |
duct epithelial cell | 9.66e-09 | 3 |
branched duct epithelial cell | 9.66e-09 | 3 |
tracheal epithelial cell | 9.66e-09 | 3 |
tracheoblast | 9.66e-09 | 3 |
placental epithelial cell | 1.40e-08 | 3 |
general ecto-epithelial cell | 2.36e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 4.10e-23 | 1 |
wall of urinary bladder | 4.10e-23 | 1 |
mucosa of urinary bladder | 4.10e-23 | 1 |
placenta | 1.25e-22 | 4 |
allantois | 1.25e-22 | 4 |
chorion | 2.17e-13 | 7 |
urinary bladder | 2.90e-12 | 2 |
lower urinary tract | 2.90e-12 | 2 |
gallbladder | 1.04e-08 | 3 |
gall bladder primordium | 1.04e-08 | 3 |
esophagus | 1.21e-08 | 3 |
esophageal region | 1.21e-08 | 3 |
mixed endoderm/mesoderm-derived structure | 2.08e-07 | 29 |
extraembryonic membrane | 3.66e-07 | 14 |
membranous layer | 3.66e-07 | 14 |
cornea | 6.87e-07 | 4 |
eye surface | 6.87e-07 | 4 |
optic eminence | 6.87e-07 | 4 |
corneal primordium | 6.87e-07 | 4 |
mucosa of oral region | 8.14e-07 | 4 |
respiratory system mucosa | 8.14e-07 | 4 |