Coexpression cluster:C1467: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{Coexpression_clusters
|full_id=C1467_hippocampus_locus_occipital_skeletal_optic_thalamus_medulla
|id=C1467
}}") |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{Coexpression_clusters | {{Coexpression_clusters|coexpression_dpi_cluster_scores_median=0.0362496447385107,0,0,0,0,0,0,0,0,0.0477126478678714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0877514257027229,0.121853104351623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.055330073681763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.133474480407003,0,0,0.12206750241012,0.0697160876101768,0.0783093285707404,0,0,0,0,0,0,0,0.0760676121854375,0.105550390723108,0,0,0,0,0,0,0,0,0,0,0.087969206950705,0.0463435368962281,0,0,0,0,0,0,0.0876068315883375,0,0,0,0,0,0,0.0478753273256649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0233318851006955,0,0,0,0,0.0212980973874494,0,0,0,0,0,0,0,0,0,0,0.0383676965652315,0,0,0.0499826791869596,0,0.0477396614475454,0.0428357178336246,0.0488578057762586,0,0,0,0,0,0,0.112073900096239,0.122707119002353,0.132315154786818,0.141428256470343,0.0856043003192711,0.0924647000597185,0.147519864883055,0.110794497837607,0.0706852410802355,0,0,0,0,0,0.297284871485779,0.201612826790636,0,0.112065323353027,0,0,0,0,0.0192283016265209,0,0,0,0,0,0,0,0,0,0,0,0,0.0866041999330693,0,0,0,0,0,0,0,0.0183241141132955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0413820215904058,0,0,0,0,0,0,0.0587225291397336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0820564584332857,0,0.119059432222927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0647775726819609,0,0,0,0,0,0,0.114192387487647,0,0.0382548469252227,0,0,0.0267551882976717,0,0.0322218878591601,0,0,0,0,0.0341103214948521,0.120397778333718,0,0,0,0,0,0,0,0,0,0.0616014322868925,0.0611699433831035,0.179464855601511,0.0380513783661453,0.0344317163371687,0,0,0,0,0,0,0,0,0,0,0,0.066432124538699,0.0763454992192642,0,0.115102153805393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108034143853115,0,0,0,0,0,0,0,0,0,0,0,0,0.0220392977878354,0,0.0475916898912054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431284923111057,0,0,0,0,0,0,0,0.299757310563537,0.539201622799499,0,0,0,0,0.105947296040957,0,0,0,0,0.0545795660013852,0.483862947493127,0,0.0408567533019575,0,0,0.147159551208692,0.274325306326297,0,0,0.156741891907292,0,0.04680465889238,0.330488736158673,0.200460002428107,0.178197101007194,0,0.0695293501927681,0,0.312546490439586,0,0.175101594723494,0.194071538049422,0.488862220241528,0,0.151759294076614,0.0761868857799707,0.0680099902262517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151377956260822,0,0.14999995822066,0.158233587831279,0.494669392823004,0,0.0505977919678937,0,0.0659980617160664,0,0.492957240844837,0,0.0388046890849592,0,0,0,0,0,0,0.0214231979817236,0,0,0.059286596649457,0,0.054385572482455,0,0,0.226109033214549,0,0.0349684140344003,0.0986563388367941,0.0200550750766617,0.0306358713632606,0.0501563638100868,0.055457578755968,0,0.0884836478019413,0,0.078715799182705,0.139378919643758,0.110463730030267,0.245772370357558,0.184667131255606,0.079112335990984,0.133001054121959,0,0,0.0292234134059126,0.0254319378601874,0.0459554750499192,0,0.100516131620047,0.0210904460458432,0,0.566990848399491,0.360104197577363,0,0,0,0.185637913671796,0.0819265422366715,0.234991060098501,0.112496946091474,0.0775504613844595,0.349352499062447,0.0414963267669169,0,0,0.118969586029405,0.0651734073592509,0.0674513019436447,0.143086648793222,0,0.719306404409939,0.691949636983883,0,0.055966461856338,0,0,0.124452564556199,0.125083138191402,0,0.578924301718019,0.127331062855079,0,0.0716196360387782,0.108664111243117,0,0.366270496043257,0.0983905284693096,0,0,0,0,0,0.0341649341991287,0.190354577367897,0.0296969223726757,0,0.798668141613062,0.486224817260432,0.44146074217208,0,0.102379826867101,0.0634100406668813,0.13104488281241,0,0,0,0,0,0,0,0,0.137532892493643,0.275557388108753,0.356775332814486,0.45865894913821,0.653652274954441,0.334122004170582,0.208494943783879,0,0.117590266077527,0,0,0,0.166825123124581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169796621955272,0.316433336976288,0,0,0,0,0,0,0.0430524462440283,0,0.109159252600095,0.0677931267972615,0.213675358977116,0,0.057615473793988,0.634410757481337,0,0,0,0,0,0.148245601888275,0.0395883422157288,0,0,0.097605984802664,0,0,0,0.0989165855502945,0.154494591378698,0,0.0225068173062394,0,0,0,0,0,0,0,0,0,0.0987387934593774,0.383270498593678,0.791231967758562,0.582337850720483,0.088644620115335,0.128976090745779,0.522784028028932,0.706420466021324,0,0.0242150211128343,0.0365710300748918,0.0237397835175619,0,0,0,0.031493427513643,0.0398989464991893,0.250789242335245,0,0,0.0598874413026267,0.135994010214157,0.329644282741866,0.511529120632831,0.129823318197737,0,0,0,0,0.420477549803256,0.366211674419953,0.062949339066792,0,0.0890788809625826,0,0.0473659963914933,0.0687378478097941,0.294743541758745,0.19276857886417,0.0242585478973525,0.158554838819797,0.032817368032432,0.250091010316884,0.0536511514102425,0.225610469262369,0.186399527025227,0.230430017040464,0.0580284054719272,0,0,0,0,0,0,0,0.155405081403798,0,0,0.153323010348428,0.04479482281067,0,0,0,0.0406617582988581,0.23842438954415,0.684977780179344,0.204900862021211,0,0,0.128992044825859,0.0727382932666575,0,0.0674631969906868,0.0658085919932182,0.183698208001194,0.369926726109542,0.0858467613960337,0,0,0.162072933156177,0.317515739911624,0.308403826537919,0.310853221899103,0.0681588064684956,0.0390109377342095,0,0,0.296672866738879,0,0.016760402053431,0.238130540907848,0.163974701329705,0.28323430382417,0,0.148586905529929,0.157260487458867,0.363133322283997,0,0,0,0,0,0,0.0613978103693023,0,0,0,0,0.0515534839118225,0.673303257764169,0.2857590994138,0.0839445661171913,0.376805420698745,0,0,0.106905007334503,0.109247223693217,0.593113621494695,0.156983076262146,0.177145207109335,0.0415951580869847,0.109541028439739,0.26104462643807,0.0802005422252233,0.0220203204819844,0,0.0853362109468269,0,0.0250431515419316,0.203424808680285,0,0,0|full_id=C1467_hippocampus_locus_occipital_skeletal_optic_thalamus_medulla|id=C1467|ontology_enrichment_celltype=|ontology_enrichment_disease=DOID:305!2.93e-16!106;DOID:0050687!4.34e-15!143|ontology_enrichment_uberon=UBERON:0007023!3.72e-39!114;UBERON:0011216!1.07e-32!223;UBERON:0001049!1.99e-27!56;UBERON:0005068!1.99e-27!56;UBERON:0006241!1.99e-27!56;UBERON:0007135!1.99e-27!56;UBERON:0000073!7.58e-25!53;UBERON:0002616!7.58e-25!53;UBERON:0002780!3.10e-21!41;UBERON:0001890!3.10e-21!41;UBERON:0003080!3.10e-21!41;UBERON:0006240!3.10e-21!41;UBERON:0000477!1.65e-20!373;UBERON:0003075!1.66e-20!82;UBERON:0007284!1.66e-20!82;UBERON:0000955!1.96e-20!68;UBERON:0006238!1.96e-20!68;UBERON:0001017!1.01e-19!81;UBERON:0001016!1.40e-19!89;UBERON:0000481!2.18e-19!342;UBERON:0002346!1.18e-18!86;UBERON:0003528!2.31e-18!34;UBERON:0002020!2.31e-18!34;UBERON:0001893!1.50e-17!34;UBERON:0002791!1.76e-16!32;UBERON:0001869!2.57e-16!32;UBERON:0004921!2.12e-15!118;UBERON:0002619!3.12e-15!22;UBERON:0000062!4.66e-15!503;UBERON:0001007!1.51e-14!145;UBERON:0001555!1.51e-14!145;UBERON:0007026!1.51e-14!145;UBERON:0010371!1.87e-14!104;UBERON:0003056!1.31e-13!61;UBERON:0010314!2.98e-13!132;UBERON:0001950!3.08e-13!20;UBERON:0004119!3.44e-13!160;UBERON:0000925!3.44e-13!160;UBERON:0006595!3.44e-13!160;UBERON:0000025!3.87e-13!192;UBERON:0004111!6.69e-13!240;UBERON:0000956!1.47e-12!25;UBERON:0000203!1.47e-12!25;UBERON:0000064!4.82e-12!218;UBERON:0000922!3.34e-10!592;UBERON:0001041!8.48e-10!87;UBERON:0004121!1.86e-09!171;UBERON:0000924!1.86e-09!171;UBERON:0006601!1.86e-09!171;UBERON:0000468!8.65e-09!656;UBERON:0005423!9.88e-09!581;UBERON:0000467!1.38e-08!624;UBERON:0000480!1.72e-08!625;UBERON:0000065!7.77e-08!54;UBERON:0008947!1.12e-07!38;UBERON:0003258!1.12e-07!38;UBERON:0002050!1.79e-07!564;UBERON:0000125!1.91e-07!9;UBERON:0002308!1.91e-07!9;UBERON:0000923!1.94e-07!560;UBERON:0010316!1.94e-07!560;UBERON:0005291!1.94e-07!560;UBERON:0006598!1.94e-07!560;UBERON:0010317!1.94e-07!560;UBERON:0002532!1.94e-07!560;UBERON:0003076!2.18e-07!15;UBERON:0003057!2.18e-07!15;UBERON:0002420!2.60e-07!9;UBERON:0007245!2.60e-07!9;UBERON:0010009!2.60e-07!9;UBERON:0010011!2.60e-07!9;UBERON:0000454!2.60e-07!9;UBERON:0002298!2.61e-07!6;UBERON:0005911!4.87e-07!82;UBERON:0005409!5.54e-07!25;UBERON:0000063!6.14e-07!98;UBERON:0000200!8.05e-07!6;UBERON:0001737!9.92e-07!9|tfbs_overrepresentation=0.272825,0.113895,0.462362,1.90041e-13,0.00115417,0.148479,4.06865e-08,0.657264,1.02801e-08,0.0507505,3.36214e-08,4.11927e-09,5.21335e-06,0.0303636,0.275252,2.55423e-07,0.262088,2.64966e-06,1.14997e-07,8.76616e-14,0.341686,0.000217523,0.000734274,0.180791,0.0814159,8.24963e-07,6.66318e-07,0.173212,0.0392706,0.178021,3.23706e-08,0.00197636,0.0357376,0.0803664,0.128625,9.07711e-10,0.902769,0.000105764,3.17385e-07,8.54796e-09,0.183651,2.45831e-09,1.62236e-05,9.17977e-16,7.65302e-06,0.0711697,0.074588,0.000780472,0.210181,0.000151204,3.58153e-12,5.87179e-06,0.135407,0.0167471,0.358057,0.0753565,1.5793e-07,0.380173,0.150513,0.199999,3.39856e-05,5.56596e-08,0.0227105,0.000583922,0.000216626,0.000171579,3.56e-07,0.116417,0.164736,0.3062,0.61426,0.130776,0.0153734,3.0196e-07,0.0148962,0.0339424,8.15677e-08,0.00376218,0.0731115,0.0144524,5.79734e-05,0.000196599,0.0831938,0.00201824,0.000730978,0.440248,0.000355065,0.37437,0.847037,0.121557,0.164159,0.0967167,2.1681e-09,0.0925031,0.163486,0.216824,0.827684,0.0446887,0.17689,0.000529974,3.45885e-09,0.137451,0.0382808,6.78975e-05,1.54083e-10,9.14072e-05,1.37951e-05,0.200319,0.267635,0.00048281,4.23214e-06,0.00228519,0.042413,0.0350582,3.09108e-06,0.0663658,0.0402636,0.1101,0.258716,0.160649,0.000551847,0.383317,0.260612,4.50838e-13,0.194257,0.000702932,0.173151,0.0293679,1.97619e-11,0.0347173,0.115605,0.144069,0.111159,0.045053,9.36649e-06,0.00168323,0.125521,0.00600956,0.0649881,0.00789487,0.0450332,0.238929,8.47334e-06,1.58317e-06,0.837237,0.000443965,3.47536e-14,0.000796406,0.0763672,0.0279877,0.00010364,0.000301458,0.00076657,0.0524571,0.0835935,0.000133582,6.63707e-07,1.27267e-06,0.100724,8.74224e-07,0.0156946,5.3717e-11,5.01934e-22,0.000338068,0.472167,0.215506,0.0784618,9.9824e-06,0.0790799,0.526782,0.327089,0.256483,0.712672,0.00575404,0.153476,0.172044,0.00368082,0.330576,0.325054,0.069998,1.43358e-10,0.00015774,0.00148838,3.92898e-15,0.142014,0.223569,0.332561,0.0787371,0.158872,7.8956e-09,0.20281,7.25349e-05,1.34961e-08,0.0962194,0.212647,0.0919303,5.25313e-10,0.116937,0.130723,0.207318,1.63489e-06,2.25602e-07,0.0607132,2.60889e-18,0.00338386,0.122105,0.00419603,0.000377446,9.1154e-06,0.324906,3.0057e-06,2.77678e-12,2.8804e-13,0.213053,0.527451,0.000584175,0.301442,7.21332e-05,0.122022,1.2167e-07,0.263715,0.606181,0.287766,0.296123,1.13303e-13,0.237192,0.258424,1.02967e-09,9.12478e-06,2.16287e-07,0.0287748,0.62151,2.07791e-06,1.9713e-08,0.00117613,2.03061e-06,0.00438975,0.00357138,0.30027,0.383466,0.331647,0.57619,0.187116,0.15928,9.02762e-09,0.000247308,2.90344e-08,0.21083,0.000414636,6.47619e-06,0.292806,0.336043,0.0645139,2.62603e-06,3.21796e-14,0.00046301,9.21387e-05,0.362971,4.61544e-07,0.825612,1.00505e-05,0.319541,0.300061,0.000189209,1.34437e-08,2.80843e-08,1.54637e-32,1.90862e-06,2.20339e-13,0.145331,0.479224,0.122578,0.444637,0.693924,3.88256e-05,0.00285791,0.000201968,9.23066e-05,0.917756,0.952889,0.86741,0.809072,0.968931,0.962859,0.558337,0.319502,3.52774e-06,0.693419,0.000421161,0.00696197,2.32377e-09,0.552041,0.635008,0.55052,0.00019374,0.569904,0.133486,0.0330625,0.646895,0.63674,1.48018e-05,0.0377583,0.000886203,0.0135239,0.33041,0.6682,1.05345e-13,0.00143932,0.388991,0.00103119,6.90239e-06,0.353295,0.875797,0.191888,0.770331,5.55232e-08,0.000858981,0.0115038,0.00306886,2.00529e-09,0.000881322,0.00235719,1.2075e-07,0.397052,0.0536387,0.842556,0.486953,1.12836e-13,0.821632,0.152268,5.29736e-07,0.820775,1.75122e-05,0.499918,0.371535,2.88597e-05,0.607959,0.821595,0.0422912,0.000795659,0.913739,0.968037,0.936421,0.00430916,6.58518e-09,4.69728e-06,0.00183718,0.00495552,5.17049e-05,0.136919,0.753048,0.422744,0.000846361,0.43545,0.0296135,0.0410066,1.04323e-19,0.129605,0.140844,6.76567e-05,0.273639,0.781913,0.00898628,0.288102,0.000110742,0.469565,0.47635,0.69534,0.000161923,0.0405429,0.90708,0.0881806,0.143918,2.49181e-10,0.877625,0.105502,0.752145,0.502548,0.0107455,0.726789,0.494769,0.188457,0.899629,0.47878,0.840813,0.0272121,0.000202016,0.559521,2.3738e-08,0.288188,0.0896504,0.665296,1.01854e-05,0.000930941,0.179513,0.98005,2.35499e-05,0.268648,0.269896,0.622411,7.80633e-15,0.00738659,0.0366212,0.440842,2.52846e-05,0.00426961,0.2554,5.15495e-15,8.77919e-13,0.187452,0.794085,0.000763049,0.488193,0.00176478,0.0381718,0.518055,0.548889,3.2343e-08,0.000154987,0.488244,0.456149,0.589702,0.000193655,0.000732744,0.000879034,0.000351818,9.66384e-09,0.939276,9.09406e-06,0.439006,0.878565,0.109766,0.000481872,0.563445,0.799582,3.99919e-13,2.46638e-17,0.703388,0.0619339,0.00541424,0.000255538,6.16184e-06,5.52305e-09,0.343113,4.36472e-05,1.56906e-14,0.188364,0.583972,0.57398,0.0721289,0.213354,6.06224e-05,0.0213373,0.870975,0.320598,0.00112907,0.134669,2.85027e-09,0.348016,2.547e-05,0.111821,0.0395767,0.0148187,1.54363e-09,0.32649,0.68834,0.346776,6.85522e-09,0.00528749,0.000110032,0.00642837,5.17296e-18,0.251518,4.07981e-06,4.92511e-06,0.121642,0.617317,0.0354999,0.515499,0.481305,0.628382,9.52706e-10,0.310441,3.55984e-15,1.33512e-07,6.88966e-22,0.000868499,3.1995e-05,9.16844e-05,4.49359e-08,0.00776602,3.77565e-18,0.00019564,0.376483,0.349839,0.20944,0.0974547,0.15892,0.128942,5.29248e-10,6.57153e-09,0.0887944,0.194576,2.17321e-08,0.000215027,0.341783,0.0940377,0.0106365,0.64718,0.0312072,0.32067,4.51397e-06,0.309827,0.167604,5.70083e-05,0.0223847,0.0911662,0.00163433,0.000541438,0.00960329,0.317242,0.0378853,0.378417,0.0592343,0.000210773,0.0870651,1.09724e-07,0.374106,0.000391138,0.153213,1.46534e-12,3.23246e-05,0.00251101,0.173078,8.72907e-23,0.485366,0.180797,0.00025095,0.0289867,0.000377991,2.24927e-09,0.000169451,0.0124973,2.26849e-05,0.297422,8.52166e-05,2.6162e-09,0.0118367,1.5657e-07,2.06264e-06,0.0678906,0.076236,3.47292e-05,0.31161,0.0108066,0.00470252,0.0574586,0.603631,0.0650516,0.575882,0.0140702,2.64088e-08,0.00697187,0.0247866,0.229952,1.61249e-10,1.75852e-10,0.123916,0.00162049,0.796918,0.00402376,7.81645e-05,0.00089138,0.00594349,0.00398219,0.443026,0.00162144,7.82227e-05,0.0328145,0.632847,2.20096e-05,0.147684,0.146453,0.0559261,0.157053,0.000801567,0.00153888,0.273582,0.262915,0.306556,0.0376263,0.170005,0.523331,0.000676685,1.9054e-15,0.0174213,0.692556,0.248113,0.0116773,4.54817e-06,0.240599,0.245625,0.0867386,0.3342,1.84582e-09,2.93818e-21,0.0975693,0.119835,3.1059e-17,4.66043e-11,1.87691e-05,1.25054e-08,0.142859,0.477403,0.749878,0.628069,2.88684e-09,0.000704529,0.000141418,8.35384e-05,5.56921e-05,0.795569,3.49014e-09,0.0929171,0.263641,8.76736e-11,1.79383e-07,0.00619153,0.137556,0.00184007,7.96203e-06,0.0699003,1.57678e-08,4.84714e-13,0.992133,0.99594,0.370285,0.388777,0.0225777,0.000407207,1.69978e-07,4.05251e-06,0.00117351,0.00130183,5.82705e-25,8.54291e-10,0.208284,0.135613,0.00191872,1.03453e-10,2.93438e-12,0.00310693,0.0879809,0.00570761,7.94445e-09,2.00422e-06,0.055885,0.198881,1.01755e-06,0.111068,0.4137,4.25752e-10,0.491435,0.281527,0.35188,0.3889,0.192889,0.547162,0.316041,0.0104397,0.280212,2.71982e-07,0.346061,0.275075,0.409805,0.287361,1.31634e-15,4.61089e-18,2.22586e-07,1.31621e-15,0.278571,0.185281,0.286026,0.31159,4.07493e-11,1.1003e-09,0.404239,0.0211177,0.00068907,0.0271768,0.160738,0.553042,0.213489,0.000112437,6.66972e-10,0.319005,5.60781e-05,1.95008e-08,0.436073,0.00369647,0.0192309,0.120497,0.00148458,5.86203e-12,2.55972e-11,0.0005682,1.76515e-06,0.259063,0.306056,0.00893311,0.156156,0.33569,0.288104,0.526446,0.761719,7.10343e-11,0.433479,0.324956,0.0138171,0.408751,0.021944,0.855529,0.070868,0.00471432,2.34106e-11,0.0850317,2.46839e-08,0.02451,0.60218,0.11882,0.648789,1.8879e-05,6.20372e-06,4.19232e-07,1.57822e-17,0.00101805,0.00752181,0.355968,1.23604e-06,0.00231217,0.00434194,0.616927,0.82397,0.873099,0.0281229,0.922804,7.42199e-10,0.737948,0.0524496,0.0313119,2.50288e-05,0.984603,0.91547,1.22026e-06,0.0168458,0.853963,0.623606,2.29251e-24,0.754734,0.476894,0.926642,0.000701489,3.67589e-05,0.711296,0.492887,0.819065,0.727698,0.559471,0.717449,0.449761,3.35227e-05,0.10821,0.950427,0.629087,0.929695,0.00934291,0.297082,0.938085,0.612581,0.746016,0.830195,6.3597e-06,0.953814,0.72684,0.953275,0.935968,0.177522,0.36546,0.360788,0.368898,0.0359655,0.447298,0.670481,0.576455,0.619669,0.287839,1.40661e-09,0.654187,0.183051,0.175142,0.583703,3.6335e-05,0.407994,0.225997,7.03232e-05,0.808511,0.529993,6.1499e-05,0.484887,0.9516,0.852842,0.650025,0.766238,5.00306e-11,0.881739,0.563634,0.848142,0.624569,0.772094,0.960862,0.785953,0.394773,0.0241364,2.17738e-07,0.00178364,0.275501,0.823122,0.367684,3.02743e-13,3.25572e-14,0.654742,0.305952,9.63105e-05,0.159817,0.532764,8.09391e-14,1.3981e-11,0.0488258,0.240491,0.186923,0.650555,0.597394,0.0048995,0.628973,0.594475,0.416321,0.0768842,0.47205,0.610358,0.693748,0.578885,0.474879,0.868553,0.518205,0.424119,0.237985,0.519279,0.515179,0.745866,0.623664,0.757999,2.58236e-06,0.619652,0.706112,0.754688,3.29215e-09,0.758981,0.355152,0.346355,0.712437,0.841498,1.7164e-16,4.42248e-05,6.90914e-05,0.02704,0.722202,0.639482,2.71536e-34,0.600697,0.0042923,7.45924e-09,0.727464,3.84374e-08,2.453e-07,0.356483,0.846483,4.92131e-11,0.55481,0.0187132,5.18196e-14,0.866311,0.000117078,8.81339e-26,0.0118156,0.00440804,5.75445e-07,0.066291,7.78046e-10,0.000391869,7.44934e-05,0.138667,6.84672e-11,0.000498119,0.345583,0.299527,1.15067e-20,9.60401e-06,5.21313e-20,2.28267e-06,0.304651,0.440771,0.613566,8.26503e-10,4.98484e-15,0.694395,5.80683e-05,0.349721,3.39124e-09,0.0147365,0.00170901,0.524829,0.00165043,0.357781,0.338712,0.231439,0.0739965,0.0641227,0.177916,0.232711,0.327419,0.000196406,2.163e-09,2.21898e-11,0.000207977,0.080461,0.433875,0.395243,0.130132,0.000126422,0.462042,0.213394,0.0403158,1.78572e-05,0.298,0.40549,0.30902,2.32851e-08,1.30723e-05,0.101672,0.0890286,0.465261,0.000106229,0.213995,2.72686e-05,0.225945,0.18761,1.67252e-07,2.1026e-07,0.385234,0.291842,0.392097,0.352327,0.000167015,9.85671e-10,0.000980897,0.328594,0.00544144,0.448388,0.278746,0.387086,0.232479,0.334662,0.336321,2.99487e-10,9.39115e-10,0.000415428,0.366035,2.47196e-09,0.372037,0.263608,0.00100331,0.43615,0.218495,0.000186231,0.431643,0.316114,4.81674e-07,3.42624e-08,9.45094e-05,2.40834e-05,2.86767e-05,0.244977,1.48902e-08,0.395958,0.314638,5.38147e-05,0.184473,0.363414,0.524458,2.36308e-09,2.68195e-13,1.07605e-06,3.41881e-15,0.202084,0.104337,0.000207292,6.04841e-08,0.0118501,3.09104e-08,0.104584,0.537494,0.454949,6.89072e-18,0.340219,0.412672,0.343186,0.155969,0.186603,0.124175,0.228962,0.12366,8.33069e-05,0.000388944,4.57935e-19,0.240899,4.54331e-06,2.56918e-06,0.129421,1.66365e-06,6.61484e-05,0.000233897,0.00011409,0.504058,7.43309e-05,0.0112392,0.263371,0.457065,0.446399,0.360168,0.403229,0.507716,0.00306574,0.323763,0.486842,0.00364611,6.92095e-13,0.0487389,0.000119546,0.358783,0.491474,1.23034e-15,9.98682e-15,0.0257599,2.98928e-09,1.7764e-17,5.99744e-06,0.351946,8.32174e-10,8.01022e-12,6.87068e-05,0.437432,0.302171,4.87934e-22,0.178399,0.00017694,2.04611e-17,0.372405,0.182559,0.000845592,0.533328,4.62587e-05,2.92339e-18,0.000501516,5.15171e-07,2.48334e-08,4.36361e-14,6.55296e-08,0.320916,0.289812,0.384881,0.000346035,0.000118691,4.12612e-08|tfbs_overrepresentation_for_novel_motifs=0.44418,0.0360157,0.436508,0.58616,1.01854,1.42848,0.662701,0.742622,0.267027,0.075749,0.553339,0.707204,0.223349,0.650887,0.391663,1.06849,0.889639,0.336106,0.236034,0.127969,1.11315,0.0880431,0.576478,0.387783,0.483957,0.730467,0.202389,0.574247,0.396295,0.547818,0.530785,0.92701,0.302275,0.640661,0.35719,0.0334022,0.35388,0.585658,0.329602,0.248856,1.6715,0.513952,0.0979105,0.390088,0.0393783,0.468392,0.66382,0.542147,0.0909286,1.81235,0.745008,0.675919,0.149032,1.00488,1.15929,0.653901,0.400834,0.62023,0.186533,0.619193,0.968558,0.666252,1.35522,0.861462,0.684675,0.826413,1.24834,1.61834,0.916468,1.45553,0.500342,2.12614,0.146905,1.15727,0.218784,0.206105,0.192925,0.84426,0.913168,0.477584,0.676305,0.86037,0.684313,0.272514,1.10535,0.0481066,0.126687,0.181871,0.771626,1.71797,1.34233,1.07807,0.94406,0.30974,0.393853,0.864356,0.234532,0.987239,1.82799,0.166235,1.58445,0.938327,0.981588,0.893363,0.814675,0.548668,0.877269,0.647343,0.483695,0.376529,0.44815,0.978783,0.430775,0.563054,1.29401,0.352243,0.0577227,0.529546,0.824029,0.312699,1.14892,1.81315,0.581628,0.695878,1.40534,0.845034,0.656181,0.949126,1.1919,0.324369,1.07876,0.53374,1.20639,0.692462,1.35529,0.175219,0.524606,0.57483,1.31259,2.17352,1.7705,1.27501,0.657956,0.983666,0.816466,0.611524,0.799467,2.01411,0.510514,0.306342,0.136746,0.0926553,1.07915,0.258882,0.665754,1.48627,0.755083,0.378604,0.484017,0.454152,1.27379,1.06043,0.912368,0.457485,0.83286,0.683502,0.29379,0.661335,0.0115686|tfbs_overrepresentation_jaspar=MA0003.1;0.00461978,MA0004.1;0.558729,MA0006.1;0.391183,MA0007.1;0.539222,MA0009.1;1.03681,MA0014.1;0.0254709,MA0017.1;0.432438,MA0019.1;0.7124,MA0024.1;0.929647,MA0025.1;1.17262,MA0027.1;2.65688,MA0028.1;0.408079,MA0029.1;0.949428,MA0030.1;0.937696,MA0031.1;0.871496,MA0038.1;0.665566,MA0040.1;0.955415,MA0041.1;1.41501,MA0042.1;0.544748,MA0043.1;1.03713,MA0046.1;1.02569,MA0048.1;0.152639,MA0050.1;0.545671,MA0051.1;0.661179,MA0052.1;0.959373,MA0055.1;0.0586456,MA0056.1;0,MA0057.1;0.147053,MA0058.1;0.458909,MA0059.1;0.457555,MA0060.1;0.267412,MA0061.1;0.23892,MA0063.1;0,MA0066.1;0.66601,MA0067.1;1.35893,MA0068.1;0.578694,MA0069.1;1.02175,MA0070.1;1.01032,MA0071.1;0.625297,MA0072.1;1.00572,MA0073.1;0.347876,MA0074.1;0.660398,MA0076.1;0.475586,MA0077.1;0.997832,MA0078.1;0.763954,MA0081.1;0.457725,MA0083.1;1.04447,MA0084.1;1.5477,MA0087.1;1.00322,MA0088.1;0.0971959,MA0089.1;0,MA0090.1;0.490736,MA0091.1;0.561458,MA0092.1;0.522012,MA0093.1;0.394379,MA0095.1;0,MA0098.1;0,MA0100.1;0.679972,MA0101.1;0.397846,MA0103.1;0.381434,MA0105.1;0.134725,MA0106.1;0.70837,MA0107.1;0.320267,MA0108.2;0.868347,MA0109.1;0,MA0111.1;0.504913,MA0113.1;0.725375,MA0114.1;0.314898,MA0115.1;1.28169,MA0116.1;0.323925,MA0117.1;1.07516,MA0119.1;0.440684,MA0122.1;1.10154,MA0124.1;2.77189,MA0125.1;1.15445,MA0130.1;0,MA0131.1;0.782708,MA0132.1;0,MA0133.1;0,MA0135.1;1.06778,MA0136.1;0.672893,MA0139.1;0.226048,MA0140.1;0.622527,MA0141.1;0.455728,MA0142.1;0.838805,MA0143.1;2.88894,MA0144.1;0.299851,MA0145.1;0.107156,MA0146.1;0.0213085,MA0147.1;0.327615,MA0148.1;0.584698,MA0149.1;0.612449,MA0062.2;0.23336,MA0035.2;0.621793,MA0039.2;0.00570825,MA0138.2;0.765223,MA0002.2;0.255126,MA0137.2;0.414885,MA0104.2;0.26661,MA0047.2;0.695777,MA0112.2;0.101413,MA0065.2;0.109623,MA0150.1;0.484557,MA0151.1;0,MA0152.1;0.629368,MA0153.1;1.13732,MA0154.1;0.132326,MA0155.1;0.0961854,MA0156.1;0.417278,MA0157.1;0.810597,MA0158.1;0,MA0159.1;0.328286,MA0160.1;0.600559,MA0161.1;0,MA0162.1;0.0383129,MA0163.1;0.0270301,MA0164.1;0.738243,MA0080.2;0.394469,MA0018.2;0.709805,MA0099.2;0.629739,MA0079.2;0.000444266,MA0102.2;1.58513,MA0258.1;0.289793,MA0259.1;2.42942,MA0442.1;0}} | ||
|full_id=C1467_hippocampus_locus_occipital_skeletal_optic_thalamus_medulla | |||
|id=C1467 | |||
}} |
Latest revision as of 11:45, 17 September 2013
Full id: C1467_hippocampus_locus_occipital_skeletal_optic_thalamus_medulla
Phase1 CAGE Peaks
Hg19::chr1:169101089..169101109,+ | p@chr1:169101089..169101109 + |
Hg19::chr1:169101118..169101155,+ | p@chr1:169101118..169101155 + |
Hg19::chr1:169101157..169101169,+ | p@chr1:169101157..169101169 + |
Hg19::chr1:169101171..169101205,+ | p@chr1:169101171..169101205 + |
Hg19::chr1:169101209..169101238,+ | p@chr1:169101209..169101238 + |
Hg19::chr1:169101479..169101501,+ | p@chr1:169101479..169101501 + |
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
No results for this coexpression
Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data
No GOStat results
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br>disease_data<br>
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.93e-16 | 106 |
cell type cancer | 4.34e-15 | 143 |
Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
Motifs | -log10(p-value) |
---|---|
MA0003.1 | 0.00461978 |
MA0004.1 | 0.558729 |
MA0006.1 | 0.391183 |
MA0007.1 | 0.539222 |
MA0009.1 | 1.03681 |
MA0014.1 | 0.0254709 |
MA0017.1 | 0.432438 |
MA0019.1 | 0.7124 |
MA0024.1 | 0.929647 |
MA0025.1 | 1.17262 |
MA0027.1 | 2.65688 |
MA0028.1 | 0.408079 |
MA0029.1 | 0.949428 |
MA0030.1 | 0.937696 |
MA0031.1 | 0.871496 |
MA0038.1 | 0.665566 |
MA0040.1 | 0.955415 |
MA0041.1 | 1.41501 |
MA0042.1 | 0.544748 |
MA0043.1 | 1.03713 |
MA0046.1 | 1.02569 |
MA0048.1 | 0.152639 |
MA0050.1 | 0.545671 |
MA0051.1 | 0.661179 |
MA0052.1 | 0.959373 |
MA0055.1 | 0.0586456 |
MA0056.1 | 0 |
MA0057.1 | 0.147053 |
MA0058.1 | 0.458909 |
MA0059.1 | 0.457555 |
MA0060.1 | 0.267412 |
MA0061.1 | 0.23892 |
MA0063.1 | 0 |
MA0066.1 | 0.66601 |
MA0067.1 | 1.35893 |
MA0068.1 | 0.578694 |
MA0069.1 | 1.02175 |
MA0070.1 | 1.01032 |
MA0071.1 | 0.625297 |
MA0072.1 | 1.00572 |
MA0073.1 | 0.347876 |
MA0074.1 | 0.660398 |
MA0076.1 | 0.475586 |
MA0077.1 | 0.997832 |
MA0078.1 | 0.763954 |
MA0081.1 | 0.457725 |
MA0083.1 | 1.04447 |
MA0084.1 | 1.5477 |
MA0087.1 | 1.00322 |
MA0088.1 | 0.0971959 |
MA0089.1 | 0 |
MA0090.1 | 0.490736 |
MA0091.1 | 0.561458 |
MA0092.1 | 0.522012 |
MA0093.1 | 0.394379 |
MA0095.1 | 0 |
MA0098.1 | 0 |
MA0100.1 | 0.679972 |
MA0101.1 | 0.397846 |
MA0103.1 | 0.381434 |
MA0105.1 | 0.134725 |
MA0106.1 | 0.70837 |
MA0107.1 | 0.320267 |
MA0108.2 | 0.868347 |
MA0109.1 | 0 |
MA0111.1 | 0.504913 |
MA0113.1 | 0.725375 |
MA0114.1 | 0.314898 |
MA0115.1 | 1.28169 |
MA0116.1 | 0.323925 |
MA0117.1 | 1.07516 |
MA0119.1 | 0.440684 |
MA0122.1 | 1.10154 |
MA0124.1 | 2.77189 |
MA0125.1 | 1.15445 |
MA0130.1 | 0 |
MA0131.1 | 0.782708 |
MA0132.1 | 0 |
MA0133.1 | 0 |
MA0135.1 | 1.06778 |
MA0136.1 | 0.672893 |
MA0139.1 | 0.226048 |
MA0140.1 | 0.622527 |
MA0141.1 | 0.455728 |
MA0142.1 | 0.838805 |
MA0143.1 | 2.88894 |
MA0144.1 | 0.299851 |
MA0145.1 | 0.107156 |
MA0146.1 | 0.0213085 |
MA0147.1 | 0.327615 |
MA0148.1 | 0.584698 |
MA0149.1 | 0.612449 |
MA0062.2 | 0.23336 |
MA0035.2 | 0.621793 |
MA0039.2 | 0.00570825 |
MA0138.2 | 0.765223 |
MA0002.2 | 0.255126 |
MA0137.2 | 0.414885 |
MA0104.2 | 0.26661 |
MA0047.2 | 0.695777 |
MA0112.2 | 0.101413 |
MA0065.2 | 0.109623 |
MA0150.1 | 0.484557 |
MA0151.1 | 0 |
MA0152.1 | 0.629368 |
MA0153.1 | 1.13732 |
MA0154.1 | 0.132326 |
MA0155.1 | 0.0961854 |
MA0156.1 | 0.417278 |
MA0157.1 | 0.810597 |
MA0158.1 | 0 |
MA0159.1 | 0.328286 |
MA0160.1 | 0.600559 |
MA0161.1 | 0 |
MA0162.1 | 0.0383129 |
MA0163.1 | 0.0270301 |
MA0164.1 | 0.738243 |
MA0080.2 | 0.394469 |
MA0018.2 | 0.709805 |
MA0099.2 | 0.629739 |
MA0079.2 | 0.000444266 |
MA0102.2 | 1.58513 |
MA0258.1 | 0.289793 |
MA0259.1 | 2.42942 |
MA0442.1 | 0 |
ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data
No analysis results for this cluster
Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data
This analysis result is provided for C0 - C305 clusters.