FFCP PHASE1:Hg19::chr17:58165588..58165614,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:58165588..58165614,-
|short_description=p3@uc002iyl.2
|description=CAGE_peak_3_at_uc002iyl.2_5end
|association_with_transcript=39bp_to_uc002iyl.2_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=39bp_to_uc002iyl.2_5end | |||
|cluster_id=chr17:58165588..58165614,- | |||
|description=CAGE_peak_3_at_uc002iyl.2_5end | |||
|id=chr17:58165588..58165614,- | |||
|ontology_enrichment_celltype=CL:0000055!7.16e-26!180;CL:0000057!3.69e-16!75;CL:0000680!1.30e-09!57;CL:0000056!1.30e-09!57;CL:0000355!1.30e-09!57;CL:0000499!2.10e-09!27;CL:0000183!1.93e-08!59;CL:0000187!2.82e-08!54;CL:0000327!1.80e-07!14;CL:0002334!2.29e-07!12;CL:0000393!3.95e-07!60;CL:0000211!3.95e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.39e-09;9!CL:0000447;1.39e-09;9!CL:0000138;6.07e-08;6!CL:0000499;2.07e-07;28!CL:0000135;2.17e-07;3!CL:0000388;2.17e-07;3!CL:0002623;2.96e-07;3!CL:0002564;3.24e-07;3!CL:0000327;7.07e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.16e-09,9;CL:0000447,1.16e-09,9;CL:0000058,4.84e-08,6;CL:0000138,4.84e-08,6;CL:0000499,2.00e-07,28;CL:0000135,2.16e-07,3;CL:0000388,2.16e-07,3;CL:0002623,2.98e-07,3;CL:0002564,3.29e-07,3;CL:0000327,6.10e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.42e-09!83;UBERON:0002329!3.42e-09!83;UBERON:0003077!3.42e-09!83;UBERON:0003059!3.42e-09!83;UBERON:0007282!3.42e-09!83;UBERON:0009618!3.42e-09!83;UBERON:0007285!3.42e-09!83;UBERON:0001737!1.34e-08!9;UBERON:0001134!2.79e-08!61;UBERON:0002036!2.79e-08!61;UBERON:0003082!2.79e-08!61;UBERON:0002385!1.08e-07!63;UBERON:0001015!1.08e-07!63;UBERON:0000383!1.08e-07!63;UBERON:0004290!1.82e-07!70;UBERON:0000475!2.58e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.03e-14;9!UBERON:0001557;1.03e-14;9!UBERON:0004905;3.52e-12;8!UBERON:0000982;3.52e-12;8!UBERON:0004770;3.52e-12;8!UBERON:0011135;4.16e-11;5!UBERON:0002216;4.16e-11;5!UBERON:0011134;4.16e-11;5!UBERON:0002209;4.16e-11;5!UBERON:0002213;4.16e-11;5!UBERON:0007844;4.16e-11;5!UBERON:0011138;4.16e-11;5!UBERON:0001130;4.16e-11;5!UBERON:0001066;4.16e-11;5!UBERON:0001468;4.16e-11;5!UBERON:0005284;2.79e-10;5!UBERON:0001044;3.53e-08;6!UBERON:0003293;3.53e-08;6!UBERON:0003294;3.53e-08;6!UBERON:0010047;3.53e-08;6!UBERON:0003408;3.53e-08;6!UBERON:0000167;3.53e-08;6!UBERON:0007846;2.17e-07;3!UBERON:0000043;2.17e-07;3!UBERON:0007845;2.17e-07;3!UBERON:0002242;3.24e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.65e-15,9;UBERON:0004905,3.71e-12,8;UBERON:0000982,3.71e-12,8;UBERON:0004770,3.71e-12,8;UBERON:0011135,4.25e-11,5;UBERON:0002216,4.25e-11,5;UBERON:0011134,4.25e-11,5;UBERON:0002209,4.25e-11,5;UBERON:0002213,4.25e-11,5;UBERON:0005856,4.25e-11,5;UBERON:0005866,4.25e-11,5;UBERON:0005863,4.25e-11,5;UBERON:0007844,4.25e-11,5;UBERON:0011138,4.25e-11,5;UBERON:0001130,4.25e-11,5;UBERON:0001066,4.25e-11,5;UBERON:0001468,4.25e-11,5;UBERON:0005284,2.95e-10,5;UBERON:0001044,3.92e-08,6;UBERON:0003293,3.92e-08,6;UBERON:0003294,3.92e-08,6;UBERON:0010047,3.92e-08,6;UBERON:0000167,3.92e-08,6;UBERON:0007846,2.16e-07,3;UBERON:0000043,2.16e-07,3;UBERON:0007845,2.16e-07,3;UBERON:0001557,2.52e-07,19;UBERON:0002242,3.29e-07,3;UBERON:0003068,3.29e-07,3;UBERON:0002328,3.29e-07,3;UBERON:0004880,3.29e-07,3 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.281908808191942,0,0.446961094427288,2.61701557230111,0,0,0,0,0,0,0.263766978228454,28.3424948278507,27.505982185417,0.672325146451775,0,0,0,0.492484232307152,2.65200898617529,1.25381888591235,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,5.06014813338393,8.02140657017423,6.37324683427624,2.3858578411533,1.94653948121054,0,0,0,0,0,0,0.649094787309367,1.21890816109487,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.13967460498122,0.794455084879313,1.43418310374407,0,3.92474320099615,0,2.22000793575444,0,0.404132016209064,0.163461903113459,11.9572367839496,5.76175924479999,0.468642863667593,0,0,0.149448680551801,0,0,0.280901613404497,1.22492502752936,0.245668634623536,2.06651562351531,0,0.494533858557114,0.910161361938026,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0.612975591598039,0,0.113432183160021,0,0.213557388818567,0.635795703478686,0.300091096084402,0.515262646192195,0.257640540045629,2.23340227597908,0.168776332241266,0.292311015483596,0.252433774244115,1.28869858099219,2.10139873864455,0.710019185033229,0.201504196455281,1.18692414617341,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,1.85747171212792,12.271951188383,1.18306800039844,2.86593973132773,2.89213235860178,2.09558548191549,2.39667388501647,2.37270619111097,2.83145747136345,3.53198637225623,1.92373578473195,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445893486866185,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0.897048674762886,3.92364061949952,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0,0,0.532844358032199,0.285955987316295,2.71310802695722,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,20.8473624277677,29.8641033168696,1.42636905040718,2.17171960001369,5.75333703141074,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,9.44724486237377,8.00272833695483,15.7333713745847,1.66376689224646,3.7470087647404,2.68094105557689,3.5142424497814,0.902838299183157,0,7.24311499047534,1.32845119707087,1.29058417979192,0.0868836144680828,4.89502893656851,8.5785855952714,0,0,0,0,0,0,0.992431231275107,0.920771839728375,0.561320188866147,0.128139149255701,0.511707249066704,0.804269605718038,2.96836132889982,0.308419387605311,0.887808626565635,0.574890092096664,0.519254429183621,1.04589340613963,0,0,0,0.114814448164607,0.182091168006717,2.09799063935079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48335359146061,0.924291702687866,1.84204409671355,0.551346289938122,0.751941714077915,1.16013355131383,0.681813019328807,0.623224249527161,0,0,0,0,0.929691098594572,0.31481234683064,0.6970372701606,0.308033580176089,0,0,0.18532421910392,2.57624796135584,6.32669227911434,7.59310619324942,2.2875623270859,1.79128453917934,0.42793898803392,0,0,0,0,0,0.202182481573316,0,1.68503382495592,1.46290121726877,0.487426979262569,1.05650146756755,0,0.565621727814851,0,0,1.32687795048244,0,9.260408548267,1.31178950409327,0.405820753925408,0.6196469961995,0.281695602532241,0,0.392996164052485,0,0,11.1887046707762,1.31717957183961,0,3.49934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0.307160702099232,1.9882952955326,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,14.4478087188028,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552896299656123,0.295547618953547,5.92340572315726,0.435753854075961,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0.91821828489147,7.51920297579007,0.150323419414493,0,0,0,0,0,0.569219092059585,0.554698692052555,0,0.195984794828755,0,0,0.343972064943233,0.483781656445426,0.438535902517113,0.164230914106418,0,0,0.225980740780532,0.137041924646751,0.19871461170299,0.253243183823515,0,0,0,0,0,0,0,0,0,0,2.44627570932505,2.92887969674533,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,3.23737241392301,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,3.54972964917927,0.434674820589684,0,0,0,0,0,0,0,1.64180283175561,0,1.10961172300523,3.4092540949516,6.79233334731953,3.55924488638614,0,0.302461847526478,1.24349760466224,1.33069634990671,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,2.40376993627955,2.69399591012735,1.26184898228651,0,0,0,0,0,0.244736704506468,0.537266523244462,0.308801447160972,0,0,0,1.01365464391844,0,1.0362910251936,0,0.138258436151731,1.7537427795545,1.86010776438708,0.654261577023377,0.327609848846413,0,0,0,0,0,2.83757976783418,0,0,0,0,0,0,0,0,0,0,0,1.90802610392051,0,0,5.64281509905094,0.3062454773532,0.256916900385838,0,0.159633859057151,0.205116364240755,0,0,0.968853873791107,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| ||
|short_description=p3@uc002iyl.2 | |||
}} | }} |
Latest revision as of 19:31, 25 July 2015
Short description: | p3@uc002iyl.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_uc002iyl.2_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_uc002iyl.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.16e-09 | 9 |
carbohydrate secreting cell | 1.16e-09 | 9 |
chondroblast | 4.84e-08 | 6 |
chondrocyte | 4.84e-08 | 6 |
stromal cell | 2.00e-07 | 28 |
fibrocyte | 2.16e-07 | 3 |
tendon cell | 2.16e-07 | 3 |
acinar cell of salivary gland | 2.98e-07 | 3 |
nucleus pulposus cell of intervertebral disc | 3.29e-07 | 3 |
extracellular matrix secreting cell | 6.10e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.65e-15 | 9 |
articulation | 3.71e-12 | 8 |
skeletal joint | 3.71e-12 | 8 |
articular system | 3.71e-12 | 8 |
intervertebral cartilage | 4.25e-11 | 5 |
symphysis | 4.25e-11 | 5 |
nonsynovial joint | 4.25e-11 | 5 |
fibrous joint | 4.25e-11 | 5 |
cartilaginous joint | 4.25e-11 | 5 |
developing mesenchymal condensation | 4.25e-11 | 5 |
pre-cartilage condensation | 4.25e-11 | 5 |
cartilaginous condensation | 4.25e-11 | 5 |
cartilage element | 4.25e-11 | 5 |
post-cranial axial skeletal system | 4.25e-11 | 5 |
vertebral column | 4.25e-11 | 5 |
intervertebral disk | 4.25e-11 | 5 |
intervertebral joint | 4.25e-11 | 5 |
brain vasculature | 2.95e-10 | 5 |
saliva-secreting gland | 3.92e-08 | 6 |
gland of oral region | 3.92e-08 | 6 |
gland of foregut | 3.92e-08 | 6 |
oral gland | 3.92e-08 | 6 |
oral cavity | 3.92e-08 | 6 |
dense regular connective tissue | 2.16e-07 | 3 |
tendon | 2.16e-07 | 3 |
regular connective tissue | 2.16e-07 | 3 |
upper respiratory tract | 2.52e-07 | 19 |
nucleus pulposus | 3.29e-07 | 3 |
axial mesoderm | 3.29e-07 | 3 |
notochord | 3.29e-07 | 3 |
chordamesoderm | 3.29e-07 | 3 |