FFCP PHASE1:Hg19::chr1:159684371..159684385,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1401 | |EntrezGene=1401 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2367 | |HGNC=2367 | ||
|TSSclassifier=strong | |||
|UniProt=P02741,Q5VVP7,C9JRE9 | |UniProt=P02741,Q5VVP7,C9JRE9 | ||
|association_with_transcript=0bp_to_ENST00000255030,ENST00000343919,ENST00000368110,ENST00000368111,ENST00000368112,ENST00000437342,NM_000567,uc001ftw.2,uc001ftx.1_5end | |association_with_transcript=0bp_to_ENST00000255030,ENST00000343919,ENST00000368110,ENST00000368111,ENST00000368112,ENST00000437342,NM_000567,uc001ftw.2,uc001ftx.1_5end | ||
|cluster_id=chr1:159684371..159684385,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_CRP_5end | |description=CAGE_peak_1_at_CRP_5end | ||
|id=chr1:159684371..159684385,- | |id=chr1:159684371..159684385,- | ||
|ontology_enrichment_celltype=CL:0000181!7.82e-10!12;CL:0000417!7.82e-10!12;CL:0000668!7.82e-10!12;CL:0000414!7.82e-10!12;CL:0000412!7.82e-10!12;CL:0000182!7.82e-10!12 | |ontology_enrichment_celltype=CL:0000181!7.82e-10!12;CL:0000417!7.82e-10!12;CL:0000668!7.82e-10!12;CL:0000414!7.82e-10!12;CL:0000412!7.82e-10!12;CL:0000182!7.82e-10!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;7.72e-21;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.12e-21,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.78e-22;11!UBERON:0009497;4.40e-19;13!UBERON:0000358;1.93e-16;1!UBERON:0006242;2.63e-16;1!UBERON:0003104;8.66e-08;31 | |||
|ontology_enrichment_disease=DOID:114!1.11e-14!2;DOID:178!4.11e-08!1;DOID:326!4.11e-08!1;DOID:3978!4.11e-08!1;DOID:3394!4.11e-08!1;DOID:5844!4.11e-08!1;DOID:1287!8.83e-08!4 | |ontology_enrichment_disease=DOID:114!1.11e-14!2;DOID:178!4.11e-08!1;DOID:326!4.11e-08!1;DOID:3978!4.11e-08!1;DOID:3394!4.11e-08!1;DOID:5844!4.11e-08!1;DOID:1287!8.83e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:3493;8.09e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,8.09e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005057!1.86e-16!26;UBERON:0005172!1.64e-13!55;UBERON:0005173!1.64e-13!55;UBERON:0009497!2.49e-13!25;UBERON:0000015!2.49e-13!25;UBERON:0002423!2.49e-13!25;UBERON:0006235!2.49e-13!25;UBERON:0004161!2.49e-13!25;UBERON:0002107!3.03e-13!19;UBERON:0006925!3.03e-13!19;UBERON:0008836!3.03e-13!19;UBERON:0007023!4.49e-12!115;UBERON:0002417!5.46e-12!61;UBERON:0000916!5.46e-12!61;UBERON:0002368!7.16e-12!35;UBERON:0003929!2.08e-11!54;UBERON:0000949!2.21e-11!45;UBERON:0008835!2.31e-11!22;UBERON:0003894!2.31e-11!22;UBERON:0009854!7.61e-11!23;UBERON:0007499!6.23e-10!25;UBERON:0009856!1.58e-09!26;UBERON:0005177!1.31e-08!107;UBERON:0002530!2.61e-08!59;UBERON:0007190!3.83e-08!1;UBERON:0001301!4.41e-08!1;UBERON:0006834!4.72e-08!1;UBERON:0002363!6.24e-08!1;UBERON:0007647!6.24e-08!1;UBERON:0010115!6.24e-08!1;UBERON:0002365!6.72e-08!31;UBERON:0002330!6.72e-08!31;UBERON:0005911!6.13e-07!82 | |ontology_enrichment_uberon=UBERON:0005057!1.86e-16!26;UBERON:0005172!1.64e-13!55;UBERON:0005173!1.64e-13!55;UBERON:0009497!2.49e-13!25;UBERON:0000015!2.49e-13!25;UBERON:0002423!2.49e-13!25;UBERON:0006235!2.49e-13!25;UBERON:0004161!2.49e-13!25;UBERON:0002107!3.03e-13!19;UBERON:0006925!3.03e-13!19;UBERON:0008836!3.03e-13!19;UBERON:0007023!4.49e-12!115;UBERON:0002417!5.46e-12!61;UBERON:0000916!5.46e-12!61;UBERON:0002368!7.16e-12!35;UBERON:0003929!2.08e-11!54;UBERON:0000949!2.21e-11!45;UBERON:0008835!2.31e-11!22;UBERON:0003894!2.31e-11!22;UBERON:0009854!7.61e-11!23;UBERON:0007499!6.23e-10!25;UBERON:0009856!1.58e-09!26;UBERON:0005177!1.31e-08!107;UBERON:0002530!2.61e-08!59;UBERON:0007190!3.83e-08!1;UBERON:0001301!4.41e-08!1;UBERON:0006834!4.72e-08!1;UBERON:0002363!6.24e-08!1;UBERON:0007647!6.24e-08!1;UBERON:0010115!6.24e-08!1;UBERON:0002365!6.72e-08!31;UBERON:0002330!6.72e-08!31;UBERON:0005911!6.13e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;1.27e-29;25!UBERON:0002107;5.53e-29;19!UBERON:0006925;5.53e-29;19!UBERON:0002365;8.90e-18;31!UBERON:0002330;8.90e-18;31!UBERON:0002368;3.58e-15;33!UBERON:0005172;4.69e-12;52!UBERON:0005173;4.69e-12;52!UBERON:0000949;1.05e-11;43!UBERON:0002075;3.31e-08;18!UBERON:0002417;4.51e-08;58!UBERON:0000916;4.51e-08;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,1.27e-29,25;UBERON:0000015,1.27e-29,25;UBERON:0002423,1.27e-29,25;UBERON:0006235,1.27e-29,25;UBERON:0004161,1.27e-29,25;UBERON:0002107,5.81e-29,19;UBERON:0006925,5.81e-29,19;UBERON:0008836,5.81e-29,19;UBERON:0008835,5.29e-25,22;UBERON:0003894,5.29e-25,22;UBERON:0009854,6.52e-24,23;UBERON:0007499,5.44e-22,25;UBERON:0009856,3.86e-21,26;UBERON:0002365,1.04e-17,31;UBERON:0002330,1.04e-17,31;UBERON:0005172,1.44e-17,54;UBERON:0005173,1.44e-17,54;UBERON:0000949,2.34e-16,45;UBERON:0002417,9.39e-16,60;UBERON:0000916,9.39e-16,60;UBERON:0002368,1.15e-15,35;UBERON:0003929,1.61e-13,54;UBERON:0005177,1.58e-11,101;UBERON:0002530,3.38e-09,59;UBERON:0005911,9.63e-09,82;UBERON:0001041,3.16e-08,87;UBERON:0002075,3.23e-08,18;UBERON:0009569,3.94e-08,112 | |||
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|short_description=p1@CRP | |short_description=p1@CRP | ||
}} | }} |
Latest revision as of 23:18, 17 September 2015
Short description: | p1@CRP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CRP_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000255030, ENST00000343919, ENST00000368110, ENST00000368111, ENST00000368112, ENST00000437342, NM_000567, uc001ftw.2, uc001ftx.1_5end |
EntrezGene: | CRP |
HGNC: | 2367 |
UniProt: | P02741Q5VVP7C9JRE9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.12e-21 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 1.27e-29 | 25 |
anatomical boundary | 1.27e-29 | 25 |
hepatobiliary system | 1.27e-29 | 25 |
foregut-midgut junction | 1.27e-29 | 25 |
septum transversum | 1.27e-29 | 25 |
liver | 5.81e-29 | 19 |
digestive gland | 5.81e-29 | 19 |
liver bud | 5.81e-29 | 19 |
hepatic diverticulum | 5.29e-25 | 22 |
liver primordium | 5.29e-25 | 22 |
digestive tract diverticulum | 6.52e-24 | 23 |
epithelial sac | 5.44e-22 | 25 |
sac | 3.86e-21 | 26 |
exocrine gland | 1.04e-17 | 31 |
exocrine system | 1.04e-17 | 31 |
abdomen element | 1.44e-17 | 54 |
abdominal segment element | 1.44e-17 | 54 |
endocrine system | 2.34e-16 | 45 |
abdominal segment of trunk | 9.39e-16 | 60 |
abdomen | 9.39e-16 | 60 |
endocrine gland | 1.15e-15 | 35 |
gut epithelium | 1.61e-13 | 54 |
trunk region element | 1.58e-11 | 101 |
gland | 3.38e-09 | 59 |
endo-epithelium | 9.63e-09 | 82 |
foregut | 3.16e-08 | 87 |
viscus | 3.23e-08 | 18 |
subdivision of trunk | 3.94e-08 | 112 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 8.09e-09 | 2 |