FFCP PHASE1:Hg19::chr15:39888784..39888798,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39888784..39888798,+ | |||
|coexpression_cluster_id=C453 | |||
|description=CAGE_peak_at_chr15:39888784..39888798,+ | |description=CAGE_peak_at_chr15:39888784..39888798,+ | ||
|id=chr15:39888784..39888798,+ | |id=chr15:39888784..39888798,+ | ||
|ontology_enrichment_celltype=CL:0002139!3.45e-12!24;CL:0000057!1.24e-11!75;CL:0002371!1.77e-09!591;CL:0000115!3.77e-09!35;CL:0000071!4.68e-09!18;CL:0002546!4.68e-09!18;CL:0000055!5.14e-09!180;CL:0000222!1.62e-08!119;CL:0002078!9.44e-08!44;CL:0000548!1.81e-07!679;CL:0000004!1.81e-07!679;CL:0000255!1.81e-07!679;CL:0000144!2.79e-07!625;CL:0000012!4.38e-07!682;CL:0002620!7.78e-07!23 | |ontology_enrichment_celltype=CL:0002139!3.45e-12!24;CL:0000057!1.24e-11!75;CL:0002371!1.77e-09!591;CL:0000115!3.77e-09!35;CL:0000071!4.68e-09!18;CL:0002546!4.68e-09!18;CL:0000055!5.14e-09!180;CL:0000222!1.62e-08!119;CL:0002078!9.44e-08!44;CL:0000548!1.81e-07!679;CL:0000004!1.81e-07!679;CL:0000255!1.81e-07!679;CL:0000144!2.79e-07!625;CL:0000012!4.38e-07!682;CL:0002620!7.78e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002139;8.73e-19;24!CL:0000071;1.08e-14;18!CL:0000115;3.53e-14;36!CL:1000413;8.28e-10;9!CL:0002078;1.07e-08;45!CL:0002537;1.07e-07;5!CL:0002544;6.12e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.52e-19,24;CL:0000115,8.04e-17,36;CL:0000071,4.17e-15,18;CL:0002546,4.17e-15,18;CL:0002078,1.94e-13,45;CL:0000057,1.21e-12,76;CL:0000213,1.54e-10,58;CL:0000215,1.54e-10,58;CL:1000413,5.07e-10,9;CL:0002537,8.11e-08,5;CL:0000222,5.53e-07,121;CL:0002544,6.08e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.08e-14;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!4.26e-15!69;UBERON:0001981!2.63e-13!60;UBERON:0007500!2.63e-13!60;UBERON:0004537!2.63e-13!60;UBERON:0006965!2.63e-13!60;UBERON:0004872!3.40e-13!84;UBERON:0002049!5.90e-13!79;UBERON:0007798!5.90e-13!79;UBERON:0003914!9.62e-10!118;UBERON:0000468!1.58e-09!659;UBERON:0000487!1.67e-09!22;UBERON:0000480!1.73e-09!626;UBERON:0000467!2.27e-09!625;UBERON:0001986!4.68e-09!18;UBERON:0004638!4.68e-09!18;UBERON:0004852!4.68e-09!18;UBERON:0006914!5.32e-09!25;UBERON:0001637!1.21e-08!42;UBERON:0003509!1.21e-08!42;UBERON:0004572!1.21e-08!42;UBERON:0000926!1.43e-08!448;UBERON:0004120!1.43e-08!448;UBERON:0006603!1.43e-08!448;UBERON:0004535!1.70e-08!110;UBERON:0000490!2.48e-08!138;UBERON:0001009!4.55e-08!113 | |ontology_enrichment_uberon=UBERON:0000055!4.26e-15!69;UBERON:0001981!2.63e-13!60;UBERON:0007500!2.63e-13!60;UBERON:0004537!2.63e-13!60;UBERON:0006965!2.63e-13!60;UBERON:0004872!3.40e-13!84;UBERON:0002049!5.90e-13!79;UBERON:0007798!5.90e-13!79;UBERON:0003914!9.62e-10!118;UBERON:0000468!1.58e-09!659;UBERON:0000487!1.67e-09!22;UBERON:0000480!1.73e-09!626;UBERON:0000467!2.27e-09!625;UBERON:0001986!4.68e-09!18;UBERON:0004638!4.68e-09!18;UBERON:0004852!4.68e-09!18;UBERON:0006914!5.32e-09!25;UBERON:0001637!1.21e-08!42;UBERON:0003509!1.21e-08!42;UBERON:0004572!1.21e-08!42;UBERON:0000926!1.43e-08!448;UBERON:0004120!1.43e-08!448;UBERON:0006603!1.43e-08!448;UBERON:0004535!1.70e-08!110;UBERON:0000490!2.48e-08!138;UBERON:0001009!4.55e-08!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0000487;8.27e-15;22!UBERON:0004638;1.08e-14;18!UBERON:0001986;1.08e-14;18!UBERON:0004852;1.08e-14;18!UBERON:0006914;1.97e-12;25!UBERON:0003915;8.28e-10;9!UBERON:0004700;8.28e-10;9!UBERON:0001917;8.28e-10;9!UBERON:0000947;3.49e-09;21!UBERON:0010191;3.49e-09;21!UBERON:0000490;1.35e-08;33!UBERON:0003688;2.91e-08;6!UBERON:0002358;2.91e-08;6!UBERON:0003684;2.91e-08;6!UBERON:0001178;2.91e-08;6!UBERON:0001637;4.21e-08;42!UBERON:0003509;4.21e-08;42!UBERON:0004572;4.21e-08;42!UBERON:0007500;4.59e-08;56!UBERON:0001981;4.59e-08;56!UBERON:0004537;4.59e-08;56!UBERON:0000055;2.34e-07;65!UBERON:0004573;2.99e-07;33!UBERON:0004571;2.99e-07;33!UBERON:0000305;3.52e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.55e-16,68;UBERON:0000487,3.52e-15,22;UBERON:0004638,4.17e-15,18;UBERON:0001986,4.17e-15,18;UBERON:0004852,4.17e-15,18;UBERON:0007500,5.46e-14,59;UBERON:0001981,5.46e-14,59;UBERON:0004537,5.46e-14,59;UBERON:0006965,5.46e-14,59;UBERON:0002049,7.53e-14,78;UBERON:0007798,7.53e-14,78;UBERON:0006914,9.48e-13,25;UBERON:0004872,9.16e-11,83;UBERON:0003915,5.07e-10,9;UBERON:0004700,5.07e-10,9;UBERON:0001917,5.07e-10,9;UBERON:0001637,3.02e-09,42;UBERON:0003509,3.02e-09,42;UBERON:0004572,3.02e-09,42;UBERON:0000947,3.21e-09,21;UBERON:0010191,3.21e-09,21;UBERON:0003914,1.22e-08,117;UBERON:0004535,1.66e-08,109;UBERON:0004871,2.35e-08,8;UBERON:0003688,4.36e-08,6;UBERON:0002358,4.36e-08,6;UBERON:0003684,4.36e-08,6;UBERON:0001178,4.36e-08,6;UBERON:0001009,5.06e-08,112;UBERON:0004923,5.92e-08,66;UBERON:0004573,2.58e-07,33;UBERON:0004571,2.58e-07,33;UBERON:0000305,3.92e-07,7 | |||
|phase1_expression=1.99846217197612,7.27941781229343,1.69145284915165,6.00439790118782,1.34088328328186,1.74467704820074,0,0,0,1.47440361900905,0.697801167972428,1.09220686065086,0.791300934685361,0.247532705920093,0.662794751455832,5.3786011716142,3.61616716814386,2.92124036154949,2.43966399395253,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.619264493264304,0,0.30120591877825,0,0,0,0,0.553995408531877,2.20598892217156,0,0,0,0,0.145398238779565,0,0,3.25400651667958,0.411167888021826,0,3.45230870786581,0.256160706529101,0.236482229888585,3.7922024881028,0.645484683583826,0,0.752969358170419,0,0.674170453335254,1.83650335422542,1.28371610830437,0,0.659702600373432,0,0.852449501065388,3.19230162491442,2.8369261234557,0.622822248995575,2.51248665256743,0.521482918420201,0,4.23779651843358,0.368277635987565,0.632924774881769,0,0,0,0.112328631146495,0.750884464207532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0.361439152384566,2.50668955317945,0.579386075843295,0,1.45990461090791,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,3.37896092523399,0,5.55424802572151,3.39184765154406,1.67799774483962,2.20094433552054,1.8809546988313,1.55050055501597,0.71153252537342,1.33888245105868,0.805658634218294,1.52054421143703,3.90499292077071,3.67663080345869,6.48113558305408,1.42879565254528,2.69435247151404,2.81528701208306,1.53316637465883,0,2.38162267109529,0,0,1.3082821564276,14.9091585508596,1.2663051166458,1.58891016975863,2.0078563452417,0.354668382198357,0,2.1349799145941,5.42668606517752,0.311211035399766,0.269421344139376,0.653847612453835,0,1.72852777344,0,0,0.570471821544449,0.448346041655403,0,0,0.140450806702248,0.61246251376468,0,0.103325781175765,3.56400857184616,16.3196173323848,0,0,0,0,0,3.07284334616587,5.21029252858333,10.065949946742,0.794025282120147,2.33206526395521,2.34913127700424,1.90738711043606,1.80054657650641,1.03052529238439,1.28820270022815,2.04728541964749,3.71307930930786,1.16924406193438,1.00973509697646,1.47279837827679,0.323292113637624,1.77504796258307,0.503760491138201,0.67824236924195,1.15956511897978,2.45471508531751,4.30206893083506,0,0,0.116193942869518,0.10366105501537,0,0,0,3.85944562915731,0,2.3218396401599,2.88751792667834,0.118306800039844,0.168584690078102,0.482022059766964,0.220587945464788,0,0.237270619111097,0,0,0,0,1.40241773803446,0,0,0,0.982827216677626,0,0,0,0.171567810298526,0.329250856225877,0,0.402115889646523,0.462942225792648,0,0,0,0,0.234817388471643,1.87676382089396,4.62985512576611,3.23432058798817,0,0,0,0,0,0.93733833986777,1.34385702559088,0.708875486211932,0.806026704325635,1.45316969256981,0.766765358330422,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0,0,0,0.387815147273333,0,0,2.6593811658487,4.16029747645464,0.257207374262142,0,0,0,0,0,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0.958499421966331,0,0,0.868687840005475,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,8.7347761842939,9.63516539504674,9.61984731707001,10.3084445193588,0.300946099727719,0,0,0,0.368738337083406,0.781952530212746,0,0,0,0,0.426910231213777,0.303127571446259,1.66435439510497,0.30239029332968,2.48107807818777,11.0492620767405,5.61320188866147,1.15325234330131,2.04682899626681,7.56013429374955,0,0.616838775210622,0.710246901252508,0.246381468041427,0.519254429183621,0.697262270759755,0,1.20303882181971,0.276242966807689,0.574072240823034,0.182091168006717,0.655622074797121,0,0,0,0,0,0,1.87103075804167,3.45465465763423,6.16909010761157,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0,0,0,3.21367859688319,0.096670718292122,0,0,0.137836572484531,0,0.290033387828457,0.0852266274161009,0,0.495854746082934,1.92190067365106,2.93509238737543,0.30347334256665,0.464845549297286,1.5740617341532,0,0,0.532306030317022,0,0.9266210955196,0.429374660225974,0,0.632758849437452,0.190630193923825,0.255897791311334,0,0,0,0.719489830333259,0.274537029736055,0.471249609382746,0.202182481573316,0,2.10629228119491,0,0.243713489631284,1.05650146756755,0.136499911407986,0,0,0,0.66343897524122,1.75380354101505,0,0.655894752046633,1.42037263873893,0.92947049429925,0.281695602532241,0.143411352204052,0.982490410131212,1.426684205925,0,0.422215270595328,0.329294892959902,0,0,0.769776901804097,0,0,0.376575203107117,1.72202149068492,0,1.33029046061003,1.60806380144872,0,0,0,0,0,0,0,0,0,3.84991942105343,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62618933211459,1.48482340416319,16.8938386154578,0,0.140669416410513,0.111308705022906,0,0,0,0.552567831062295,0,0.409074730008619,0,2.79935628895627,2.60618218327248,0.179021174675609,0,0.887790650732402,0,6.66821940867821,0,0,0,0,0.262379999988587,1.44999915086959,0.1137934482855,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0.438770794307945,0.10893846351899,0,0.230850775511391,0.455768223388005,0,0,0,0.31900115973192,2.1983422416447,0,0,0,0,0,0,0,0,0.158936578980379,0,0.16323280815914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| ||
|short_description=p@chr15:39888784..39888798,+ | |short_description=p@chr15:39888784..39888798,+ | ||
}} | }} |
Latest revision as of 01:22, 25 July 2015
Short description: | p@chr15:39888784..39888798, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39888784..39888798, + |
Coexpression cluster: | C453_hepatic_Ewing_neurofibroma_spindle_tridermal_Olfactory_bone |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.52e-19 | 24 |
endothelial cell | 8.04e-17 | 36 |
blood vessel endothelial cell | 4.17e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.17e-15 | 18 |
meso-epithelial cell | 1.94e-13 | 45 |
fibroblast | 1.21e-12 | 76 |
lining cell | 1.54e-10 | 58 |
barrier cell | 1.54e-10 | 58 |
endothelial cell of artery | 5.07e-10 | 9 |
amnion mesenchymal stem cell | 8.11e-08 | 5 |
mesodermal cell | 5.53e-07 | 121 |
aortic endothelial cell | 6.08e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
vessel | 2.55e-16 | 68 |
simple squamous epithelium | 3.52e-15 | 22 |
blood vessel endothelium | 4.17e-15 | 18 |
endothelium | 4.17e-15 | 18 |
cardiovascular system endothelium | 4.17e-15 | 18 |
epithelial tube open at both ends | 5.46e-14 | 59 |
blood vessel | 5.46e-14 | 59 |
blood vasculature | 5.46e-14 | 59 |
vascular cord | 5.46e-14 | 59 |
vasculature | 7.53e-14 | 78 |
vascular system | 7.53e-14 | 78 |
squamous epithelium | 9.48e-13 | 25 |
splanchnic layer of lateral plate mesoderm | 9.16e-11 | 83 |
endothelial tube | 5.07e-10 | 9 |
arterial system endothelium | 5.07e-10 | 9 |
endothelium of artery | 5.07e-10 | 9 |
artery | 3.02e-09 | 42 |
arterial blood vessel | 3.02e-09 | 42 |
arterial system | 3.02e-09 | 42 |
aorta | 3.21e-09 | 21 |
aortic system | 3.21e-09 | 21 |
epithelial tube | 1.22e-08 | 117 |
cardiovascular system | 1.66e-08 | 109 |
somatic layer of lateral plate mesoderm | 2.35e-08 | 8 |
omentum | 4.36e-08 | 6 |
peritoneum | 4.36e-08 | 6 |
abdominal cavity | 4.36e-08 | 6 |
visceral peritoneum | 4.36e-08 | 6 |
circulatory system | 5.06e-08 | 112 |
organ component layer | 5.92e-08 | 66 |
systemic artery | 2.58e-07 | 33 |
systemic arterial system | 2.58e-07 | 33 |
amnion | 3.92e-07 | 7 |