FFCP PHASE1:Hg19::chr3:14058794..14058815,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=348825 | |EntrezGene=348825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32178 | |HGNC=32178 | ||
|TSSclassifier=strong | |||
|UniProt=Q17RH7 | |UniProt=Q17RH7 | ||
|association_with_transcript=-85bp_to_ENST00000424053,uc003byg.2,uc003byh.1_5end | |association_with_transcript=-85bp_to_ENST00000424053,uc003byg.2,uc003byh.1_5end | ||
|cluster_id=chr3:14058794..14058815,+ | |||
|coexpression_cluster_id=C133 | |||
|description=CAGE_peak_1_at_TPRXL_5end | |description=CAGE_peak_1_at_TPRXL_5end | ||
|id=chr3:14058794..14058815,+ | |id=chr3:14058794..14058815,+ | ||
|ontology_enrichment_celltype=CL:0002251!1.94e-10!21;CL:1000415!8.31e-09!2;CL:0002076!1.84e-08!43;CL:0000159!2.33e-08!2;CL:0000066!5.59e-07!254 | |ontology_enrichment_celltype=CL:0002251!1.94e-10!21;CL:1000415!8.31e-09!2;CL:0002076!1.84e-08!43;CL:0000159!2.33e-08!2;CL:0000066!5.59e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002178;3.18e-25;3!CL:1000415;2.85e-10;2!CL:0002231;2.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.99e-25,3;CL:1000415,2.27e-10,2;CL:0002231,3.35e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.37e-16!14;DOID:305!1.28e-09!106;DOID:3493!1.85e-09!2;DOID:299!7.10e-09!25 | |ontology_enrichment_disease=DOID:1749!3.37e-16!14;DOID:305!1.28e-09!106;DOID:3493!1.85e-09!2;DOID:299!7.10e-09!25 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.57e-37;2!DOID:3151;3.56e-19;1!DOID:3149;3.56e-19;1!DOID:299;4.46e-12;25!DOID:3451;2.85e-10;2!DOID:4159;2.85e-10;2!DOID:0060122;2.85e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.57e-37,2;DOID:3151,3.91e-19,1;DOID:3149,3.91e-19,1;DOID:299,4.40e-12,25;DOID:3451,2.99e-10,2;DOID:4159,2.99e-10,2;DOID:0060122,2.99e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0002110!4.39e-12!3;UBERON:0006242!4.39e-12!3;UBERON:0000161!1.45e-10!35;UBERON:0000974!3.91e-09!10;UBERON:0003343!5.02e-09!4;UBERON:0004785!5.02e-09!4;UBERON:0004119!1.13e-08!169;UBERON:0000925!1.13e-08!169;UBERON:0006595!1.13e-08!169;UBERON:0000166!6.76e-08!21;UBERON:0003729!2.66e-07!5;UBERON:0001007!2.88e-07!155;UBERON:0001555!2.88e-07!155;UBERON:0007026!2.88e-07!155 | |ontology_enrichment_uberon=UBERON:0002110!4.39e-12!3;UBERON:0006242!4.39e-12!3;UBERON:0000161!1.45e-10!35;UBERON:0000974!3.91e-09!10;UBERON:0003343!5.02e-09!4;UBERON:0004785!5.02e-09!4;UBERON:0004119!1.13e-08!169;UBERON:0000925!1.13e-08!169;UBERON:0006595!1.13e-08!169;UBERON:0000166!6.76e-08!21;UBERON:0003729!2.66e-07!5;UBERON:0001007!2.88e-07!155;UBERON:0001555!2.88e-07!155;UBERON:0007026!2.88e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;3.56e-19;1!UBERON:0000945;1.45e-15;5!UBERON:0010039;1.45e-15;5!UBERON:0003127;1.97e-10;2!UBERON:0002110;2.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,4.69e-19,1;UBERON:0003127,2.07e-10,2;UBERON:0000945,4.22e-10,8;UBERON:0010039,4.22e-10,8;UBERON:0002110,2.47e-07,3;UBERON:0006242,2.47e-07,3 | |||
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| ||
|short_description=p1@TPRXL | |short_description=p1@TPRXL | ||
}} | }} |
Latest revision as of 02:34, 25 September 2015
Short description: | p1@TPRXL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TPRXL_5end |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | -85bp_to_ENST00000424053, uc003byg.2, uc003byh.1_5end |
EntrezGene: | TPRXL |
HGNC: | 32178 |
UniProt: | Q17RH7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.99e-25 | 3 |
epithelial cell of gall bladder | 2.27e-10 | 2 |
epithelial cell of prostate | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 4.69e-19 | 1 |
open tracheal system trachea | 2.07e-10 | 2 |
stomach | 4.22e-10 | 8 |
food storage organ | 4.22e-10 | 8 |
gallbladder | 2.47e-07 | 3 |
gall bladder primordium | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.57e-37 | 2 |
skin squamous cell carcinoma | 3.91e-19 | 1 |
keratoacanthoma | 3.91e-19 | 1 |
adenocarcinoma | 4.40e-12 | 25 |
skin carcinoma | 2.99e-10 | 2 |
skin cancer | 2.99e-10 | 2 |
integumentary system cancer | 2.99e-10 | 2 |