FFCP PHASE1:Hg19::chr17:38657867..38657882,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:38657867..38657882,-
|short_description=p1@TNS4
|description=CAGE_peak_1_at_TNS4_5end
|association_with_transcript=-13bp_to_ENST00000254051,NM_032865,uc01...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84951 | |EntrezGene=84951 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24352 | |HGNC=24352 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IZW8,Q6PJP3 | |UniProt=Q8IZW8,Q6PJP3 | ||
|association_with_transcript=-13bp_to_ENST00000254051,NM_032865,uc010cxb.2_5end | |||
|cluster_id=chr17:38657867..38657882,- | |||
|coexpression_cluster_id=C3630 | |||
|description=CAGE_peak_1_at_TNS4_5end | |||
|id=chr17:38657867..38657882,- | |||
|ontology_enrichment_celltype=CL:0000066!1.53e-29!254;CL:0002076!3.42e-19!43;CL:0000223!6.13e-16!59;CL:0002251!2.21e-10!21;CL:0002368!4.53e-10!13;CL:0002159!2.87e-08!13;CL:0002202!8.63e-07!9;CL:0002632!8.63e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002076;4.71e-18;42!CL:0002251;3.20e-13;20!CL:0002368;1.04e-12;13!CL:0002159;1.50e-09;14!CL:0002202;1.72e-08;9!CL:0002632;1.72e-08;9!CL:0000622;3.18e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.46e-28,253;CL:0002076,2.80e-24,42;CL:0000223,1.37e-19,58;CL:0002251,3.19e-13,20;CL:0002368,1.04e-12,13;CL:0002159,1.50e-09,14;CL:0002202,1.71e-08,9;CL:0002632,1.71e-08,9;CL:0000622,3.18e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;1.26e-10;58!UBERON:0006595;1.69e-08;86!UBERON:0008947;2.62e-08;29 | |||
|ontology_enrichment_disease=DOID:305!1.50e-18!106;DOID:0050687!6.96e-11!143;DOID:1749!2.24e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.82e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.71e-17,106;DOID:1749,4.57e-09,14;DOID:0050687,7.87e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.04e-30!169;UBERON:0000925!1.04e-30!169;UBERON:0006595!1.04e-30!169;UBERON:0001007!4.78e-23!155;UBERON:0001555!4.78e-23!155;UBERON:0007026!4.78e-23!155;UBERON:0001004!1.12e-21!72;UBERON:0000077!6.90e-21!130;UBERON:0004921!2.17e-19!129;UBERON:0004185!2.17e-19!129;UBERON:0000065!1.78e-16!53;UBERON:0001041!3.03e-15!98;UBERON:0008947!4.56e-13!38;UBERON:0003258!4.56e-13!38;UBERON:0000072!1.38e-12!46;UBERON:0000161!1.13e-11!35;UBERON:0005911!1.46e-10!82;UBERON:0005153!2.48e-09!37;UBERON:0000166!6.64e-09!21;UBERON:0000464!8.88e-09!104;UBERON:0005631!1.19e-08!14;UBERON:0000158!1.19e-08!14;UBERON:0000466!1.80e-08!126;UBERON:0005178!3.75e-08!34;UBERON:0002224!3.75e-08!34;UBERON:0001737!9.74e-08!9;UBERON:0003104!1.03e-07!238;UBERON:0009142!1.03e-07!238;UBERON:0005181!1.09e-07!35;UBERON:0000165!1.85e-07!28;UBERON:0000930!1.85e-07!28;UBERON:0000062!3.44e-07!511;UBERON:0001557!3.51e-07!19;UBERON:0003124!7.55e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;1.11e-11;44!UBERON:0001004;1.75e-10;65!UBERON:0001737;1.68e-09;9!UBERON:0001557;1.68e-09;9!UBERON:0000161;1.95e-09;19!UBERON:0000166;1.95e-09;19!UBERON:0000072;9.49e-09;37!UBERON:0001041;4.16e-08;14!UBERON:0000165;4.47e-08;28!UBERON:0005631;2.68e-07;10!UBERON:0000158;2.68e-07;10!UBERON:0001044;2.73e-07;6!UBERON:0003293;2.73e-07;6!UBERON:0003294;2.73e-07;6!UBERON:0010047;2.73e-07;6!UBERON:0003408;2.73e-07;6!UBERON:0000167;2.73e-07;6!UBERON:0000365;5.82e-07;5!UBERON:0003101;7.82e-07;22!UBERON:0000079;7.82e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.28e-31,160;UBERON:0000925,2.28e-31,160;UBERON:0006595,2.28e-31,160;UBERON:0001007,3.28e-23,145;UBERON:0001555,3.28e-23,145;UBERON:0007026,3.28e-23,145;UBERON:0004921,5.37e-21,118;UBERON:0001004,7.02e-21,74;UBERON:0001041,1.35e-16,87;UBERON:0000065,1.02e-15,54;UBERON:0000161,2.68e-14,36;UBERON:0008947,5.78e-13,38;UBERON:0003258,5.78e-13,38;UBERON:0000072,3.19e-11,47;UBERON:0005631,4.67e-11,14;UBERON:0000158,4.67e-11,14;UBERON:0005911,2.52e-10,82;UBERON:0000166,4.44e-10,22;UBERON:0001737,1.68e-09,9;UBERON:0003102,9.39e-09,99;UBERON:0001557,1.89e-08,19;UBERON:0005153,1.94e-08,37;UBERON:0003124,2.31e-08,7;UBERON:0002530,8.26e-08,59;UBERON:0000165,1.28e-07,29;UBERON:0000930,1.28e-07,29;UBERON:0001044,2.76e-07,6;UBERON:0003293,2.76e-07,6;UBERON:0003294,2.76e-07,6;UBERON:0010047,2.76e-07,6;UBERON:0000167,2.76e-07,6;UBERON:0005157,4.45e-07,47;UBERON:0000365,5.85e-07,5;UBERON:0005178,6.20e-07,34;UBERON:0002224,6.20e-07,34;UBERON:0003101,7.78e-07,22;UBERON:0000079,7.78e-07,22 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,1.30592814099919,77.4061899979753,157.005262793796,978.180464398911,1067.99249484701,0.37129905888014,2.31978163009541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.56077083626975,1074.80341141587,1127.11254806821,630.430587334373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,27.848377121135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.289693037921647,0,1.45990461090791,0.0945348171640679,0.221729397462564,0.87834785693126,2.16115474571226,1273.57632787073,781.242820946793,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,1.95249646038536,0,0,0,0,0,0,0,0.183201743930407,0,0,1189.22848019269,0,0,0,0,0.709336764396714,3.92474320099615,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,29.0940628987669,0.149448680551801,0,0.323745888736263,0.421352420106746,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0.300476117813194,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,414.158008328945,465.304881727964,634.985374191254,0.731842236777572,0,1.74290914304278,1.24393266018445,2.01856680700503,1.09493207722749,1.56449532329816,0,0,0,0,154.508680852036,146.668680367948,120.023492881974,204.485025445858,193.041187465872,142.599642085769,138.606584788649,137.355025587742,139.278470814593,0,0,4.5273141246454,0,0,0,0,0,12.6678091699407,0,2101.71796557518,801.424500726827,801.215910120698,844.776973626424,0,0,0,0,0,0,0,0,3.1608175918371,2.57545848628462,0,0,0,309.321652156364,471.693815982398,428.019018574765,700.347647536274,738.210203825463,2095.95310699621,0.492663237895943,0,1.65862492432618,6.48539790376326,1.38866676769018,1.65094525159639,0,0,51.3217338068116,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.613457458595699,2.50085260529839,0,0,0,0,0,0,0,8.27784570340039,0,1.47495334833363,0,0,0,0,0,0,457.116377740959,482.662774580442,314.183514769538,0,0,0,0,0,0,1.48418066444991,0.154209693802656,0,0,0,0,6.76812917713084,944.986994539381,726.242759737414,0,0,3.93373244878272,0.451199612907412,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,2.00675909541941,0.509752546090077,0,0.223874754722178,0,0,0,0,0,30.809262482669,0,0,2591.08610743873,1792.86615856873,0,0,0,0.15350367472613,0,0.107420244868274,1.30515024522806,0.511359764496605,0,446.269271474641,869.85224489447,1176.07875835009,416.972372686577,0,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.64735247149625,0,0,0,0,0,0.211107635297664,0,0,0,646.805041740892,1319.82518052997,694.724483415238,34.2683434827476,1369.00708509451,968.710985088847,1022.10650390204,634.955478172036,0,0,0,0,0,0,0,0,0,0,97.5260059604506,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,1.4098700508785,3.92995134857262,0.146508179271894,0,10.8100082749154,0,822.474749921342,56.4232893582013,1030.83131624502,0,0,0,0,0.63337622438398,12.7518712480685,1.93398740871803,0,0,0,0,124.557534690195,27.032197376017,0,20.4191849668453,0,0,0,0,0,1.82299432759663,0.0874599999961957,28.9999830173917,88.3037158695477,111.871606128817,93.8459096618707,0.344743373241465,0.583209226766509,0,0,0,0,0,0,0,22.441323484912,344.794919600986,37.3208753743416,0,0,0,0,396.199440387044,153.975554508531,409.90374275833,0,0,0.166211681900156,3.60953056987489,4.31337575499027,2.3495022176618,0.37950746544837,1.90723894776454,0,0.326465616318295,0.424059214301822,0,6.96683351754953,2.4768118060935,8.55442202907076,0,0,0,0.067401132980677,0,0,0.182454789215666,269.234515650555,0,50.9013879675714,1.20990716048664,0,0.126373159256976,0,0,3.32326936353593,0.992975867626496,7.22045712336618,58.5414905887498,0,0.138674673013139,1.38847790668105,259.679853148101,2.78589461057288,32.6738869612596,0,60.2791943931,54.743898497553,76.2031441453782,99.9956759995604,0,34.5750533394215,0,0,0,81.5449266004129,0.320635281006135,7.89776080535604,64.9381231141923,12.6799567095613,0,0,207.006744708971,0.124252535565433,559.066250111039,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0.739018197353989,0,2.32991899054908,21.8229414991009,20.6039645952916,22.7823978227145,0,0,0,0,3.05430982083536,0.137539436597234,0.415440338029185,1.1248694577575,329.639632641687,0,275.056443831398,7.17131936422703,0.83927341015997,0,0,92.5031251079726,0,0,0.25426853765475,0,0.864221491201268,0,0,32.2623606544902,0,0.113312091520126,0,0,0,0,11.4628181382501,12.6866704017001,5.23258321581704,2.35806457649499,2.48543433208317,0,0,0,169.798774566868,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0,538.540577908717,0,0,0.705797459094515,0,15.5065500613583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0.179088841081487,289.03815454267,0,0,0.192914038270915,0,0,0.345430341731199,0,0,0.194860308839388,0,0,0,0,479.467207900725,0,0,0,0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| ||
|short_description=p1@TNS4 | |||
}} | }} |
Latest revision as of 02:23, 20 September 2015
Short description: | p1@TNS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNS4_5end |
Coexpression cluster: | C3630_Sebocyte_Mammary_Keratinocyte_Urothelial_Tracheal_Corneal_Esophageal |
Association with transcript: | -13bp_to_ENST00000254051, NM_032865, uc010cxb.2_5end |
EntrezGene: | TNS4 |
HGNC: | 24352 |
UniProt: | Q8IZW8Q6PJP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.46e-28 | 253 |
endo-epithelial cell | 2.80e-24 | 42 |
endodermal cell | 1.37e-19 | 58 |
epithelial cell of alimentary canal | 3.19e-13 | 20 |
respiratory epithelial cell | 1.04e-12 | 13 |
general ecto-epithelial cell | 1.50e-09 | 14 |
epithelial cell of tracheobronchial tree | 1.71e-08 | 9 |
epithelial cell of lower respiratory tract | 1.71e-08 | 9 |
acinar cell | 3.18e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.28e-31 | 160 |
endoderm | 2.28e-31 | 160 |
presumptive endoderm | 2.28e-31 | 160 |
digestive system | 3.28e-23 | 145 |
digestive tract | 3.28e-23 | 145 |
primitive gut | 3.28e-23 | 145 |
subdivision of digestive tract | 5.37e-21 | 118 |
respiratory system | 7.02e-21 | 74 |
foregut | 1.35e-16 | 87 |
respiratory tract | 1.02e-15 | 54 |
orifice | 2.68e-14 | 36 |
respiratory primordium | 5.78e-13 | 38 |
endoderm of foregut | 5.78e-13 | 38 |
segment of respiratory tract | 3.19e-11 | 47 |
extraembryonic membrane | 4.67e-11 | 14 |
membranous layer | 4.67e-11 | 14 |
endo-epithelium | 2.52e-10 | 82 |
oral opening | 4.44e-10 | 22 |
larynx | 1.68e-09 | 9 |
surface structure | 9.39e-09 | 99 |
upper respiratory tract | 1.89e-08 | 19 |
epithelial bud | 1.94e-08 | 37 |
chorion | 2.31e-08 | 7 |
gland | 8.26e-08 | 59 |
mouth | 1.28e-07 | 29 |
stomodeum | 1.28e-07 | 29 |
saliva-secreting gland | 2.76e-07 | 6 |
gland of oral region | 2.76e-07 | 6 |
gland of foregut | 2.76e-07 | 6 |
oral gland | 2.76e-07 | 6 |
oral cavity | 2.76e-07 | 6 |
epithelial fold | 4.45e-07 | 47 |
urothelium | 5.85e-07 | 5 |
thoracic cavity element | 6.20e-07 | 34 |
thoracic cavity | 6.20e-07 | 34 |
male organism | 7.78e-07 | 22 |
male reproductive system | 7.78e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.71e-17 | 106 |
squamous cell carcinoma | 4.57e-09 | 14 |
cell type cancer | 7.87e-09 | 143 |